BAC Information

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BAC

Clone NameB6Ng01-063O06
Chromosome18 (Build37)
Map Location 55,323,091 - 55,323,613
singlet/doubletsinglet
Overlap genenone
Upstream geneEG545257, LOC100042489, Zfp608, LOC100043089
Downstream geneLOC667401, LOC667409, LOC629043, LOC100043099, LOC629057, LOC100043104
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-063O06.bB6Ng01-063O06.g
ACCDH883846DH883847
length9141,196
definitionDH883846|Mus musculus domesticus DNA, BAC clone: B6Ng01-063O06, 5' end.DH883847|Mus musculus domesticus DNA, BAC clone: B6Ng01-063O06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctatacttcctaggaactcagaataggatctcatttggaagtgga
gtctcaggtctttagggatgttatgaagtaaaaattaggtattaggagct
ggagagatggctcagcggttaagagcactgagtactcttccagagatctt
gaattcaattcccagcaaccacatggtggctcacaaccatctgtaatggg
atacgatgccctcttctggtgtgtctgaaagtaactacagtgtactcata
tatatatgataaataaatcttttttaaaaatgaggtattagagtgggtct
ttgcctaattttggaagagagcatatcatgtgacaatccaatcagacatt
gtcaagagcaccaaggattaacagcttcccatcaagactaggggaagggg
aataaatggagaggatattctacaagtttcagaggaagtatggctttaac
cctcaccttcattttggatttttattcagaaaaacaagaaagtaaatttc
agtcaagactgaaactgtggtgctttgaatatgcttggcccaggggaagt
ggcagtattaggggtgtgagcttggagtaggtgtgcccttgttggaggat
atgcatcactgtgggggatgggctttgaggttctattatcaagctccacc
atgtatggaagagagcctcctcctagttccctgaggaagacagcttcctt
ctggctgcctttggatcaagatgtaaaactcttggctcattcaacaccat
gtctgtctgcatggtgcatatttcccagctcttgatgatgaactgaacct
ctaaactgtaagccgccccatattaacgttgtcctttatagagttgcctt
gccatagtgtccttcatagcaacgaaacctactagacaactaacacaact
atataatttagatt
gaattctcctctgaagaaacagactgggaggaagaagcagctcattatga
gaaaaaagggtaccagccaggtaaagtgctagctaatcagttaaggaagc
caaaagcggctggcgaaggccagtttgctgattggcctcagggcagtcgg
cttcaaggtccgccctatgcggagtccccgccctgcgtagtgcgtcagcc
ctgcgcagagaggcagtgcgcagagaggcagtgcgcagactcattcattc
ccagagaggaacaaaggaaaatacaacaggcatttccggtctttgaagga
gccgagggtgggcgtgtccacgctccggtagaatacttacaaattaaaga
aattgccgagtcggtccgtaaatacggaaccaatgctaattttaccttgg
tgcagttagacaggctcgccggcatggcactaactcctgctgactggcaa
acggttgtaaaagccgctctccctagtatgggcaaatatatggaatggag
agctctttggcatgaagctgcacaagcgcaggcccgagcaaacgcagctg
ctttgactccagagcagagagattggacttttgacttgttaacgggtcag
ggagcttattctgctgatcagacaaactaccattggggagcttatgccca
gatttcttccacggctattagggcctggaaggcgctctctcgagcagtga
aaccactggtcagttaacaaagataatccagggacctcagaatccttctc
agattttgtgggcagaatgacagagcagcagagcgtatttttggagagtc
agagcaagctgcgcctctggtagaacagctaatctatgagcaagccacaa
aggagtgccgagcggccatagcccaagaaagaacaaaggcttacaagact
ggctcaggtcttcgagagcttgggggactctcacaatgcagctagcggcc
gcatcttcaatctcagacgctccattgagcagaaatgatcagaagacatg
ttttaattgcggaaagcctggcattttaagaaagattgcaaggctcagga
taaaaaggggggactctccctctttgctcttaatgttgcaaggtatcaat
atgctgacagtgtcgcctgttagattataaagggaagttcttcccaccta
atgtcactactgtgttgcaaaaaacgggtcactggtctcgtcccac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_55323091_55323613
seq2: B6Ng01-063O06.b_449_961

seq1  ATAAATGGAGAGGATATTCTACAAGTTTCAGAGGAAGTATGGCTTTAACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATGGAGAGGATATTCTACAAGTTTCAGAGGAAGTATGGCTTTAACC  50

seq1  CTCACCTTCATTTTGGATTTTTATTCAGAAAAACAAGAAAGTAAATTTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACCTTCATTTTGGATTTTTATTCAGAAAAACAAGAAAGTAAATTTCA  100

seq1  GTCAAGACTGAAACTGTGGTGCTTTGAATATGCTTGGCCCAGGGGAAGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAGACTGAAACTGTGGTGCTTTGAATATGCTTGGCCCAGGGGAAGTG  150

seq1  GCAGTATTAGGGGTGTGAGCTTGGAGTAGGTGTGCCCTTGTTGGAGGATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTATTAGGGGTGTGAGCTTGGAGTAGGTGTGCCCTTGTTGGAGGATA  200

seq1  TGCATCACTGTGGGGGATGGGCTTTGAGGTTCTATTATCAAGCTCCACCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCACTGTGGGGGATGGGCTTTGAGGTTCTATTATCAAGCTCCACCA  250

seq1  TGTATGGAAGAGAGCCTCCTCCTAGTTCCCTGAGGAAGACAGCTTCCTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGGAAGAGAGCCTCCTCCTAGTTCCCTGAGGAAGACAGCTTCCTTC  300

seq1  TGGCTGCCTTTGGATCAAGATGTAAAACTCTTGGCTCATTCAACACCATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGCCTTTGGATCAAGATGTAAAACTCTTGGCTCATTCAACACCATG  350

seq1  TCTGTCTGCATGGTGCATATTTCCCAGCATCTTGATGATGAACTGAACCT  400
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TCTGTCTGCATGGTGCATATTTCCCAGC-TCTTGATGATGAACTGAACCT  399

seq1  CTAAAACTGTAAGCCAGCCCCATATAAACGTTGTCCTTTATAAGAGTTGC  450
      || |||||||||||| ||||||||| ||||||||||||||| ||||||||
seq2  CT-AAACTGTAAGCC-GCCCCATATTAACGTTGTCCTTTAT-AGAGTTGC  446

seq1  CTTGGCCATAGTGTCCCTTCATAGCAACGAAACCCTAACTAAGACAAACT  500
      ||| |||||||||| |||||||||||||||||||   ||| |||| ||||
seq2  CTT-GCCATAGTGT-CCTTCATAGCAACGAAACC--TACT-AGAC-AACT  490

seq1  AACACAACTATATAATTTAGATT  523
      |||||||||||||||||||||||
seq2  AACACAACTATATAATTTAGATT  513