BAC Information

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BAC

Clone NameB6Ng01-065P08
Chromosome18 (Build37)
Map Location 21,963,916 - 22,097,265
singlet/doubletdoublet
Overlap gene4921528I01Rik
Upstream geneD030074E01Rik, Rnf125, Rnf138, Mep1b, EG622978, Gm944, LOC665722, LOC225264, Klhl14
Downstream geneLOC546708, LOC100040547, Asxl3, Nol4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-065P08.bB6Ng01-065P08.g
ACCDH885281DH885282
length1,0891,083
definitionDH885281|Mus musculus domesticus DNA, BAC clone: B6Ng01-065P08, 5' end.DH885282|Mus musculus domesticus DNA, BAC clone: B6Ng01-065P08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,096,161 - 22,097,265)(21,963,916 - 21,965,015)
sequence
gaattcattggagtcatcaaaatcaaatttttataaagcacaatattttt
atctggactttcaatatacttatgacaacaagcatggctgttagtgacta
tacccaaagtagtgattaaaataacaatatcagcctacacacccacagct
atacttttggagactaggaggcttatttgaagtcagatcatagcattttg
gtgaactcacacttggagctcacacctcccattctttaggttcttgtttt
ccatgtactgaaatttcttctatatactatgtctatgaaaaattcagtta
agggtataaaagcatgtttgaagacctattctgtagaaaattgaggttaa
cctgagacagtcactatggcaactgcagaatcatagaataataattaggc
ttgttgtagagcttaataaatgccagtctcgaagtgctagccctcagagt
atatcgcatggaattctctaggccaataacaaaccccagaatgaattaag
tctgggaatagtatttgatactggctgccttcattcccacttctttccca
catgtgttcctctgacttgagctcttcaaaagaccatgggcctacacatc
tggctccgtgtagtttctcaaggggtttatactaaggcagacatattatt
atatgcttgccttgacataaatcatcataataatttaagcacaaaatttc
acatacactatcaaagctaaatatgaaatgtaataaaaagccataacaat
tttacaacagtcatttaaaagttaccacacatttatcttccaacaagttc
aggttttagattttctggcccagcagaaaatgaagcagttaaacaagctt
agttatcctgaggagtctcttcctacacaggggatatgatagcctccaag
ttcaaggcaatctttctttgagcatttgcacaagatgttagttgagtgaa
taccatgctggccaagtaccaagatgtgcctgtgtagtaaagtgtactgt
gtatttatgggtttattactcaccaatgccaacaatctgtaccttgtcat
gaaatataagactagctgagctggggaaggatggggatt
gaattctttgcttagctctgtaccccatttttagtggggttatttaaatt
tctggagtccagcttcttgagctctaatataaggaaaaataacattttct
tagaagaaaattgcagtgtgaaaaattgtagtttttctttttttaatgca
agagtgcctgacatggagtacaaacataatgtcttttgtttatatttatt
tgttatctctagggctctaatttttacctaaataagagctcaacacttaa
agctcagccatgaatattttcagcaaaggctgttattcaaacaaacaaca
aacaaagaaaaaagactaaattcaccctttcacataaatatatatttgtt
ataagtctatgtgcctattcacatatgtgtgtgcaaatacttgtgacaca
tgactaccactgtgcatgtgtgtgtggacaacagtaattgacattgagtg
tcttctttaaagcactacttctttattctttagcattcatctctcctcac
ttacgcagattctacatttgattatgagacttaggttaagatagaactct
actggagaatgttcccaggctactgatgcacaaagggacaaaaaaaaatt
ccagtttttatttttttctggccaagacaacctttattgatgcttgtaga
tcaaccttttgagatcgcaattgtttgggctttgattatatcacacactc
acacttagtctatctcaagccaaccaacagtctagaaacattgatacaac
tggggtaggcacaggtcaacctgctccttgtctgtttgtccagtaatcac
caggagctattggctgacccagcagactagaacaccattttcctttgagc
actcccaaagtgtcctttttgaggctgtggtctcaatcagagatgggcac
ctgatgcagctggtgacatgaatttcctgagttcagtttttggtttatcc
cagattgtctaggttctagttgtcactagcacaaagttagtgcatctctg
ttatctttgtagatcttcagtcttgtttatacatacgtgtaaacccatcg
gtgatcatataatctgtgcaagtatatgtcacg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_22096161_22097265
seq2: B6Ng01-065P08.b_48_1136 (reverse)

seq1  AATCCCCCAATCTCTCCCCAAGCCTCAGCTAGTTCTTTACTATTTCATTG  50
      |||||||  |||  ||||||   ||||||||| ||||   ||||||| ||
seq2  AATCCCC--ATCCTTCCCCA--GCTCAGCTAG-TCTT--ATATTTCA-TG  42

seq1  ACATAGGTACAGATTTGTTGGCATTGGTGAGTAAAATAAACCCATAAATA  100
      ||| ||||||||| ||||||||||||||||||  ||||||||||||||||
seq2  ACA-AGGTACAGA-TTGTTGGCATTGGTGAGT--AATAAACCCATAAATA  88

seq1  CACAGTACACTTTACTACAACAGGCACATCTTGGTACTTTGGCCAGCATG  150
      |||||||||||||||||| |||||||||||||||||| ||||||||||||
seq2  CACAGTACACTTTACTAC-ACAGGCACATCTTGGTAC-TTGGCCAGCATG  136

seq1  GTATTCACTCAACTAACCTTCTTGTGCAAATGCTCAAAGAAAGATTGCCT  200
      |||||||||||||||| | |||||||||||||||||||||||||||||||
seq2  GTATTCACTCAACTAA-CATCTTGTGCAAATGCTCAAAGAAAGATTGCCT  185

seq1  TGAACTTGGAGGCTATCATATCCCCTGTGTAGGAAGAGACTCCTCAGGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTTGGAGGCTATCATATCCCCTGTGTAGGAAGAGACTCCTCAGGAT  235

seq1  AACTAAAGCTTGTTTAACTGCTTCATTTTCTGCTGGGCCAGAAAATCTAA  300
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AACT-AAGCTTGTTTAACTGCTTCATTTTCTGCTGGGCCAGAAAATCTAA  284

seq1  AACCTGAACTTGTTGGAAGATAAATGTGTGGTAACTTTTAAATGACTGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGAACTTGTTGGAAGATAAATGTGTGGTAACTTTTAAATGACTGTT  334

seq1  GTAAAATTGTTATGGCTTTTTATTACATTTCATATTTAGCTTTGATAGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAATTGTTATGGCTTTTTATTACATTTCATATTTAGCTTTGATAGTG  384

seq1  TATGTGAAATTTTGTGCTTAAATTATTATGATGATTTATGTCAAGGCAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGAAATTTTGTGCTTAAATTATTATGATGATTTATGTCAAGGCAAG  434

seq1  CATATAATAATATGTCTGCCTTAGTATAAACCCCTTGAGAAACTACACGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATAATAATATGTCTGCCTTAGTATAAACCCCTTGAGAAACTACACGG  484

seq1  AGCCAGATGTGTAGGCCCATGGTCTTTTGAAGAGCTCAAGTCAGAGGAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGATGTGTAGGCCCATGGTCTTTTGAAGAGCTCAAGTCAGAGGAAC  534

seq1  ACATGTGGGAAAGAAGTGGGAATGAAGGCAGCCAGTATCAAATACTATTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTGGGAAAGAAGTGGGAATGAAGGCAGCCAGTATCAAATACTATTC  584

seq1  CCAGACTTAATTCATTCTGGGGTTTGTTATTGGCCTAGAGAATTCCATGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGACTTAATTCATTCTGGGGTTTGTTATTGGCCTAGAGAATTCCATGC  634

seq1  GATATACTCTGAGGGCTAGCACTTCGAGACTGGCATTTATTAAGCTCTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATACTCTGAGGGCTAGCACTTCGAGACTGGCATTTATTAAGCTCTAC  684

seq1  AACAAGCCTAATTATTATTCTATGATTCTGCAGTTGCCATAGTGACTGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGCCTAATTATTATTCTATGATTCTGCAGTTGCCATAGTGACTGTC  734

seq1  TCAGGTTAACCTCAATTTTCTACAGAATAGGTCTTCAAACATGCTTTTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTTAACCTCAATTTTCTACAGAATAGGTCTTCAAACATGCTTTTAT  784

seq1  ACCCTTAACTGAATTTTTCATAGACATAGTATATAGAAGAAATTTCAGTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTAACTGAATTTTTCATAGACATAGTATATAGAAGAAATTTCAGTA  834

seq1  CATGGAAAACAAGAACCTAAAGAATGGGAGGTGTGAGCTCCAAGTGTGAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGAAAACAAGAACCTAAAGAATGGGAGGTGTGAGCTCCAAGTGTGAG  884

seq1  TTCACCAAAATGCTATGATCTGACTTCAAATAAGCCTCCTAGTCTCCAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACCAAAATGCTATGATCTGACTTCAAATAAGCCTCCTAGTCTCCAAA  934

seq1  AGTATAGCTGTGGGTGTGTAGGCTGATATTGTTATTTTAATCACTACTTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATAGCTGTGGGTGTGTAGGCTGATATTGTTATTTTAATCACTACTTT  984

seq1  GGGTATAGTCACTAACAGCCATGCTTGTTGTCATAAGTATATTGAAAGTC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTATAGTCACTAACAGCCATGCTTGTTGTCATAAGTATATTGAAAGTC  1034

seq1  CAGATAAAAATATTGTGCTTTATAAAAATTTGATTTTGATGACTCCAATG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATAAAAATATTGTGCTTTATAAAAATTTGATTTTGATGACTCCAATG  1084

seq1  AATTC  1105
      |||||
seq2  AATTC  1089

seq1: chr18_21963916_21965015
seq2: B6Ng01-065P08.g_71_1153

seq1  GAATTCTTTGCTTAGCTCTGTACCCCATTTTTAGTGGGGTTATTTAAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGCTTAGCTCTGTACCCCATTTTTAGTGGGGTTATTTAAATT  50

seq1  TCTGGAGTCCAGCTTCTTGAGCTCTAATATAAGGAAAAATAACATTTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAGTCCAGCTTCTTGAGCTCTAATATAAGGAAAAATAACATTTTCT  100

seq1  TAGAAGAAAATTGCAGTGTGAAAAATTGTAGTTTTTCTTTTTTTAATGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGAAAATTGCAGTGTGAAAAATTGTAGTTTTTCTTTTTTTAATGCA  150

seq1  AGAGTGCCTGACATGGAGTACAAACATAATGTCTTTTGTTTATATTTATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGCCTGACATGGAGTACAAACATAATGTCTTTTGTTTATATTTATT  200

seq1  TGTTATCTCTAGGGCTCTAATTTTTACCTAAATAAGAGCTCAACACTTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATCTCTAGGGCTCTAATTTTTACCTAAATAAGAGCTCAACACTTAA  250

seq1  AGCTCAGCCATGAATATTTTCAGCAAAGGCTGTTATTCAAACAAACAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCAGCCATGAATATTTTCAGCAAAGGCTGTTATTCAAACAAACAACA  300

seq1  AACAAAGAAAAAAGACTAAATTCACCCTTTCACATAAATATATATTTGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAGAAAAAAGACTAAATTCACCCTTTCACATAAATATATATTTGTT  350

seq1  ATAAGTCTATGTGCCTATTCACATATGTGTGTGCAAATACTTGTGACACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTCTATGTGCCTATTCACATATGTGTGTGCAAATACTTGTGACACA  400

seq1  TGACTACCACTGTGCATGTGTGTGTGGACAACAGTAATTGACATTGAGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTACCACTGTGCATGTGTGTGTGGACAACAGTAATTGACATTGAGTG  450

seq1  TCTTCTTTAAAGCACTACTTCTTTATTCTTTAGCATTCATCTCTCCTCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTTAAAGCACTACTTCTTTATTCTTTAGCATTCATCTCTCCTCAC  500

seq1  TTACGCAGATTCTACATTTGATTATGAGACTTAGGTTAAGATAGAACTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACGCAGATTCTACATTTGATTATGAGACTTAGGTTAAGATAGAACTCT  550

seq1  ACTGGAGAATGTTCCCAGGCTACTGATGCACAAAGGGACAAAAAAAAATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGAGAATGTTCCCAGGCTACTGATGCACAAAGGGACAAAAAAAAATT  600

seq1  CCAGTTTTTATTTTTTTCTGGCCAAGACAACCTTTATTGATGCTTGTAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTTTTATTTTTTTCTGGCCAAGACAACCTTTATTGATGCTTGTAGA  650

seq1  TCAACCTTTTGAGATCGCAATTGTTTGGGCTTTGATTATATCACACACTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACCTTTTGAGATCGCAATTGTTTGGGCTTTGATTATATCACACACTC  700

seq1  ACACTTAGTCTATCTCAAGCCAACCAACAGTCTAGAAACATTGATACAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTAGTCTATCTCAAGCCAACCAACAGTCTAGAAACATTGATACAAC  750

seq1  TGGGGTAGGCACAGGTCAACCTGCTCCTTGTCTGTTTGTCCAGTAATCAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGTAGGCACAGGTCAACCTGCTCCTTGTCTGTTTGTCCAGTAATCAC  800

seq1  CAGGAGCTATTGGCTGACCCAGCAGACTAGAACACCA-TTTCCTTTGAGC  849
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CAGGAGCTATTGGCTGACCCAGCAGACTAGAACACCATTTTCCTTTGAGC  850

seq1  ACTCCCAAAGTGTCCTTTTTGAGGCTGTGGTCTCAATCAGAGAATGGGCA  899
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ACTCCCAAAGTGTCCTTTTTGAGGCTGTGGTCTCAATCAGAG-ATGGGCA  899

seq1  CCTGATGCAGCTGGTGACATGAATTATCCTGAGTTTCAGTTTTTGGTTTT  949
      ||||||||||||||||||||||||| ||||||| ||||||||||||||| 
seq2  CCTGATGCAGCTGGTGACATGAATT-TCCTGAG-TTCAGTTTTTGGTTT-  946

seq1  ATTCCCAGATTGTCTAGGTTCTAAGTGTCACTTAGCCACAAAGTTTAGTG  999
        |||||||||||||||||||||  |||||| ||| ||||||| ||||||
seq2  -ATCCCAGATTGTCTAGGTTCTAGTTGTCAC-TAG-CACAAAG-TTAGTG  992

seq1  CCATTCTCTGTTATCTATGTAAGATCTTCAGTTCTTGTGTAAAACATACG  1049
      |   |||||||||||| ||| |||||||||| |||||| | | |||||||
seq2  C--ATCTCTGTTATCTTTGT-AGATCTTCAG-TCTTGT-TTATACATACG  1037

seq1  TGGGAAACACCCATCCGTGATCA-ATAATACTGTGCAAGATATAATGTCA  1098
      ||    | ||||||| ||||||| ||||| ||||||||| ||| ||||||
seq2  TG---TAAACCCATCGGTGATCATATAAT-CTGTGCAAG-TAT-ATGTCA  1081

seq1  CG  1100
      ||
seq2  CG  1083