BAC Information

Click to search

BAC

Clone NameB6Ng01-066O07
Chromosome18 (Build37)
Map Location 83,282,484 - 83,283,561
singlet/doubletsinglet
Overlap genenone
Upstream geneB020010K11Rik, Galr1, Mbp, EG637748, Zfp236, LOC100039563, Zfp516, LOC100041001
Downstream gene4921531P14Rik, LOC665284, Tshz1, Zadh2, LOC669856
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-066O07.bB6Ng01-066O07.g
ACCDH885943DH885944
length1,1541,064
definitionDH885943|Mus musculus domesticus DNA, BAC clone: B6Ng01-066O07, 5' end.DH885944|Mus musculus domesticus DNA, BAC clone: B6Ng01-066O07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacaatataagatactatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtatggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agctttccaaatgctgacaccattgcatacactagcaagattttactgaa
aggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaa
cacagaagtggatgctcacagtcagctaatggatggatcacagggctcca
tggaggagctagagaaagtacccaagagcttaagggatcttcaaccctat
agtggaacaacattatgaactaacaataccctgagctctgactctagctg
catatgtatcaaagaatgcctagtcggccatcactgaagaagccatggaa
acgcagactttgtgtgcccgggacagggaacccaggccaagggggggaag
gtgg
gaattctgctcatggggtactctcagtattcagaagacaacgcccccaaa
tggagagacactgagcatgctcagatgcagcagaggaggaggaccaggag
tagggggtagagcttcaggtaggagaccggggactctttcagtcaacata
tccctagagaattccgctgtttaaaggctgcaccaggccagtgaggatga
ggacagaccctgggaaacagaaggcccagcagcccatcgagcaaggaaga
gtagccatgaggcagggaagcggccatggggatttcaaagaggggggtcc
acactcgaaggagaaccctgtaaagtgtacctttcaaataatcagcagac
gctcttacagatgaatgggcactgtgattcttcttccccgtggcgcctct
ttctatttaccagggacgaagagggcagcggcagtttaagtaaatgattc
tgaccaagctccactgcccgagccaatgcgtttcttaggattacttacgg
aagtgtgggtaatggaggcaactgtgccatgaagaagcctacctcagcat
gggttagggcacaaggctgtattattagaacagctacaccacccgccggc
ccatgcccagtcttgcttacctgttacaggacttggggaaggggcttcat
aagtgtggattctggtggcagatggatgagggtgtgcattcatcaaagga
ctgtcagtctgacttctagcctaacagaaaaagcagaacttgaagtaact
ttagtaggagtttctgttggcaacattgtgtctgtatggttaaggaacag
ctgactttgggctctttatgctgtttctcctccaagtttgcctcctgtgg
tcagtcctcctgtagcctttacccaaggacaagtcacctggcccagtgac
gggcccatgccctaaatctccaggaatgctttcccattattctgcaacta
aaagaagagaataaaagtactcccacaagacaagagcgatgggtagcgcg
gagtttttatacaacttcagccttgcccgtcagaagcctataccccctat
tgggcggacctgtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_83282484_83283561
seq2: B6Ng01-066O07.g_69_1132

seq1  GAATTCTGCTCATGGGGTACTCTCAGTATTCAGAAGACAACGCCCCCAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCTCATGGGGTACTCTCAGTATTCAGAAGACAACGCCCCCAAA  50

seq1  TGGAGAGACACTGAGCATGCTCAGATGCAGCAGAGGAGGAGGACCAGGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAGACACTGAGCATGCTCAGATGCAGCAGAGGAGGAGGACCAGGAG  100

seq1  TAGGGGGTAGAGCTTCAGGTAGGAGACCGGGGACTCTTTCAGTCAACATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGGGTAGAGCTTCAGGTAGGAGACCGGGGACTCTTTCAGTCAACATA  150

seq1  TCCCTAGAGAATTCCGCTGTTTAAAGGCTGCACCAGGCCAGTGAGGATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTAGAGAATTCCGCTGTTTAAAGGCTGCACCAGGCCAGTGAGGATGA  200

seq1  GGACAGACCCTGGGAAACAGAAGGCCCAGCAGCCCATCGAGCAAGGAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGACCCTGGGAAACAGAAGGCCCAGCAGCCCATCGAGCAAGGAAGA  250

seq1  GTAGCCATGAGGCAGGGAAGCGGCCATGGGGATTTCAAAGAGGGGGGTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCCATGAGGCAGGGAAGCGGCCATGGGGATTTCAAAGAGGGGGGTCC  300

seq1  ACACTCGAAGGAGAACCCTGTAAAGTGTACCTTTCAAATAATCAGCAGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCGAAGGAGAACCCTGTAAAGTGTACCTTTCAAATAATCAGCAGAC  350

seq1  GCTCTTACAGATGAATGGGCACTGTGATTCTTCTTCCCCGTGGCGCCTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTACAGATGAATGGGCACTGTGATTCTTCTTCCCCGTGGCGCCTCT  400

seq1  TTCTATTTACCAGGGACGAAGAGGGCAGCGGCAGTTTAAGTAAATGATTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATTTACCAGGGACGAAGAGGGCAGCGGCAGTTTAAGTAAATGATTC  450

seq1  TGACCAAGCTCCACTGCCCGAGCCAATGCGTTTCTTAGGATTACTTACGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCAAGCTCCACTGCCCGAGCCAATGCGTTTCTTAGGATTACTTACGG  500

seq1  AAGTGTGGGTAATGGAGGCAACTGTGCCATGAAGAAGCCTACCTCAGCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTGGGTAATGGAGGCAACTGTGCCATGAAGAAGCCTACCTCAGCAT  550

seq1  GGGTTAGGGCACAAGGCTGTATTATTAGAACAGCTACACCACCCGCCGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTAGGGCACAAGGCTGTATTATTAGAACAGCTACACCACCCGCCGGC  600

seq1  CCATGCCCAGTCTTGCTTACCTGTTACAGGACTTGGGGAAGGGGCTTCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGCCCAGTCTTGCTTACCTGTTACAGGACTTGGGGAAGGGGCTTCAT  650

seq1  AAGTGTGGATTCTGGTGGCAGATGGATGAGGGTGTGCATTCATCAAAGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTGGATTCTGGTGGCAGATGGATGAGGGTGTGCATTCATCAAAGGA  700

seq1  CTGTCAGTCTGACTTCTAGCCTAACAGAAAAAGCAGAACTTGAAGTAACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCAGTCTGACTTCTAGCCTAACAGAAAAAGCAGAACTTGAAGTAACT  750

seq1  TTAGTAGGAGTTTCTGTTGGCAACATTGTGTCTGTATGGTTAAGGAACAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TTAGTAGGAGTTTCTGTTGGCAACATTGTGTCTGTATGGTTAAGGAACA-  799

seq1  GCTGACTTTGGGCTCTTTATGCTGTTTCTCCTCCAAGTTTGCCTCCTGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGACTTTGGGCTCTTTATGCTGTTTCTCCTCCAAGTTTGCCTCCTGTG  849

seq1  GTCAGTCCTCCTGTTAGCCTTTACCCAAGGACAAGTCACCTGGCCCAGTG  900
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GTCAGTCCTCCTG-TAGCCTTTACCCAAGGACAAGTCACCTGGCCCAGTG  898

seq1  ACGGGCCCCATGCCCTAAATCTCCAGGAATGCTTTCACCATTATTCTGCA  950
      ||||| |||||||||||||||||||||||||||||| |||||||||||||
seq2  ACGGG-CCCATGCCCTAAATCTCCAGGAATGCTTTC-CCATTATTCTGCA  946

seq1  GACTAAAAGGAAGAAGAAGAGAAAGTAACTCCAACAAGACAAGAGCGATA  1000
       ||||||| |||| |||| | ||||| ||||| |||||||||||||||| 
seq2  -ACTAAAA-GAAG-AGAATA-AAAGT-ACTCCCACAAGACAAGAGCGATG  991

seq1  GGTAAGCGCGGAGTTTTTATACAACTTCAGCCTTTGCACAGTCAGAAGCC  1050
      ||| |||||||||||||||||||||||||||| |||| | ||||||||||
seq2  GGT-AGCGCGGAGTTTTTATACAACTTCAGCC-TTGC-CCGTCAGAAGCC  1038

seq1  TTATACCCCACATGTGGGCGGACCTGTC  1078
       ||||||||  || ||||||||||||||
seq2  -TATACCCCCTAT-TGGGCGGACCTGTC  1064