BAC Information

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BAC

Clone NameB6Ng01-067D14
Chromosome18 (Build37)
Map Location 62,504,067 - 62,651,239
singlet/doubletdoublet
Overlap geneHtr4
Upstream genePpargc1b, LOC667675, 4933429F08Rik, Csnk1a1, Il17b, Pcyox1l, LOC100042730, Grpel2, Afap1l1, LOC100042738, Ablim3, Sh3tc2, Adrb2
Downstream geneFbxo38, Spink10, EG408198, 2700046A07Rik, Apcdd1, Napg, 9430028L06Rik, 9030411M15Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-067D14.bB6Ng01-067D14.g
ACCDH886180DH886181
length7701,151
definitionDH886180|Mus musculus domesticus DNA, BAC clone: B6Ng01-067D14, 5' end.DH886181|Mus musculus domesticus DNA, BAC clone: B6Ng01-067D14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(62,504,067 - 62,504,810)(62,650,070 - 62,651,239)
sequence
gaattctagggggggggttgtcccctatgtttcttttgggggctctggag
tagacggctatgttcttttctggggagggtgggaggaaaaggaagcagtt
atctctaattttgcagtggctgctcttcccagatcttctttttgttgggg
gagaataactcactggttctctcttctctgtaaggcagggaagctacaca
atgtatctgtaaaagcttgctccttcacttcagaggcagcttgaagaagg
cttatatttttcaaaacctactttattcagggttcttaaatgcttcaacc
tcccttctaccccactgaccagagttaggggaaaagaaggttaataggaa
aagggaactgtgggcctatttagaggtagttccttggggcaatttcactc
ttctttgacagaatgccagcagtccagttcaatagcgaacaccaaacaca
atttagtagcagtgtcatgatccagcagaaacggcaaggcgcaagtcagt
ggaagtgtccagaatcagccggaataccactagaagttctttggcacatt
tctctttatgaagtgaaggccaacaaagaccagggaagaccaacgaagtg
ttgcatgctgtagaaatgcaagagcattctctcactgttcatggggttct
atttatagttttttttttctaaaaatataaagtcatgtaccatctcaagt
gtttgtttttcagaaaagcatcatgtgacctctcacaagacatcttccca
gaaagacatgcgacactatt
gaattcaggtctcctgcttgcatgtagatccatggagatgccagaattca
tggctcagtttcttcagtgtttctccaagtagagggcccaaacctcagct
gcctgtgagcacactaatgaccatccacacatccctacatcctctggttt
agcaagtatggagagaaaagggaccccacactgctagcaaacaaagcctc
aaacctgtcatctactagttgtgtgacctgaccaaacaagttatccctga
gtacctgacacctttggggggagggtaaagttaacatctatcatgatact
gggtacagagtgggtggaggaatcctcattggtaaagaaaaccgagctca
gagaatagagctttcccaaggttgaagtagatacatatgggatcacaagg
aatatgaaactgatgaatgggaaacctaagaattcttgaagcagaatgct
caagttcaaaccttttctctgcctctcacttattgtgtgaactgtttata
agttttctggagaattgtgaccattaagtgacatgattccattgtaactt
catgaatgccaaccagatattgaataatatgtaacagtgatattctggtt
ataagatgtctaagggcagggcttgaacccaatacttaattcctggttta
gtgcagaattccattccacgattaactgaggactgtttgcccactggtaa
ctgatcgtacaggtgaaagaaacattcaggatggcacagtagaaaaagga
gcacgaacagggaaggaatcatcacccctcagcttggtgaaggttcccaa
agctctactgtgggatctacccagaaggctaacccagcaatcccagccaa
cccctgtgggtgagcattcatatctcacaagtttcatgacctgaggaaag
ttacttctgtggagcaacatagaggcagctgtctactttgcattaatttt
tcaaacctgacaggagcacataaggtttggtgattatctgatctacaatt
gttcgctgagcatcttgtgcaacttgagcagcctgaatgaagcatttatt
aatagcataccgacttcttcctcagcctagttggcactcctgggggaaag
cttgaattataactaagtcttgggctcctctggcacacactgcttaccct
c
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_62504067_62504810
seq2: B6Ng01-067D14.b_44_788

seq1  GAATTCTAGGGGGGGGGTTGTCCCCTATGTTTCTTTTGGGGGCTCTGGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGGGGGGGGGTTGTCCCCTATGTTTCTTTTGGGGGCTCTGGAG  50

seq1  TAGACGGCTATGTTCTTTTCTGGGGAGGGTGGGAGGAAAAGGAAGCAGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACGGCTATGTTCTTTTCTGGGGAGGGTGGGAGGAAAAGGAAGCAGTT  100

seq1  ATCTCTAATTTTGCAGTGGCTGCTCTTCCCAGATCTTCTTTTTGTTGGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTAATTTTGCAGTGGCTGCTCTTCCCAGATCTTCTTTTTGTTGGGG  150

seq1  GAGAATAACTCACTGGTTCTCTCTTCTCTGTAAGGCAGGGAAGCTACACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATAACTCACTGGTTCTCTCTTCTCTGTAAGGCAGGGAAGCTACACA  200

seq1  ATGTATCTGTAAAAGCTTGCTCCTTCACTTCAGAGGCAGCTTGAAGAAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATCTGTAAAAGCTTGCTCCTTCACTTCAGAGGCAGCTTGAAGAAGG  250

seq1  CTTATATTTTTCAAAACCTACTTTATTCAGGGTTCTTAAATGCTTCAACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATATTTTTCAAAACCTACTTTATTCAGGGTTCTTAAATGCTTCAACC  300

seq1  TCCCTTCTACCCCACTGACCAGAGTTAGGGGAAAAGAAGGTTAATAGGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTCTACCCCACTGACCAGAGTTAGGGGAAAAGAAGGTTAATAGGAA  350

seq1  AAGGGAACTGTGGGCCTATTTAGAGGTAGTTCCTTGGGGCAATTTCACTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAACTGTGGGCCTATTTAGAGGTAGTTCCTTGGGGCAATTTCACTC  400

seq1  TTCTTTGACAGAATGCCAGCAGTCCAGTTCAATAGCGAACACCAAACACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTGACAGAATGCCAGCAGTCCAGTTCAATAGCGAACACCAAACACA  450

seq1  ATTTAGTAGCAGTGTCATGATCCAGCAGAAACGGCAAGGCGCAAGTCAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGTAGCAGTGTCATGATCCAGCAGAAACGGCAAGGCGCAAGTCAGT  500

seq1  GGAAGTGTCCAGAATCAGCCGGAATACCACTAGAAGTTCTTTGGCACATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTGTCCAGAATCAGCCGGAATACCACTAGAAGTTCTTTGGCACATT  550

seq1  TCTCTTTATGAAGTGAAGGCCAACAAAGACCAGGGAAGACCAACGAAGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTATGAAGTGAAGGCCAACAAAGACCAGGGAAGACCAACGAAGTG  600

seq1  TTGCATGCTGTAGAAATGCAAGAGCATTCTCTCACTGTTCATGGGGTTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATGCTGTAGAAATGCAAGAGCATTCTCTCACTGTTCATGGGGTTCT  650

seq1  ATTTATAGTTTTTTTTTTCTAAAAATATAAAGTCATGTACCATCTCAAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATAGTTTTTTTTTTCTAAAAATATAAAGTCATGTACCATCTCAAGT  700

seq1  GTTTG-TTTTCAGTAAAGCATCATGTGACCTCTCACAAGACATCT  744
      ||||| ||||||| |||||||||||||||||||||||||||||||
seq2  GTTTGTTTTTCAGAAAAGCATCATGTGACCTCTCACAAGACATCT  745

seq1: chr18_62650070_62651239
seq2: B6Ng01-067D14.g_67_1217 (reverse)

seq1  GAGGGTAAGCAAGTGCTGTTGCCCAGAGGAGGCCCGAGGCCCTATGTTAT  50
      |||||||||| |||| |||   |||||||| |||| ||   ||  |||||
seq2  GAGGGTAAGC-AGTG-TGT--GCCAGAGGA-GCCCAAG--ACTTAGTTAT  43

seq1  AAAATCTAAGCTTTTCCCCAGTGGTGCCAACCTAGGCTTGGAGAAGGAGC  100
        |||  ||||||| ||||||  ||||||| |||||||  ||| | ||  
seq2  --AATTCAAGCTTTCCCCCAGGAGTGCCAA-CTAGGCT--GAGGAAGAAG  88

seq1  TCGGTTATGCTATTAATTATTGCTCTATTCAGGCTGCTCCAAGTTTGCTA  150
      |||| |||||||||||| | ||||  |||||||||||| |||| |||| |
seq2  TCGG-TATGCTATTAATAAATGCTTCATTCAGGCTGCT-CAAG-TTGC-A  134

seq1  CAGATTGCTCAGCGAACAAATTGTAGATTCAGATAATCACCAAACCTAAT  200
      ||   |||||||||||| ||||||||| ||||||||||||||||||| ||
seq2  CAAGATGCTCAGCGAAC-AATTGTAGA-TCAGATAATCACCAAACCTTAT  182

seq1  GTGGCTCCTGTCAGGTTTGAATAAATTAATGCAAAGTAGACAGCTGCCTC  250
      || |||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GT-GCTCCTGTCAGGTTTGAA-AAATTAATGCAAAGTAGACAGCTGCCTC  230

seq1  TATGTTGCTCCACAGCAGTAACTTTCCTCAGGTCATGAAACTTGTGAGAT  300
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TATGTTGCTCCACAGAAGTAACTTTCCTCAGGTCATGAAACTTGTGAGAT  280

seq1  ATGACTGCTCACCCACAGGGGTTGGCT-GGATTGCTGGGTTAGCCTTCTG  349
      |||| |||||||||||||||||||||| ||||||||||||||||||||||
seq2  ATGAATGCTCACCCACAGGGGTTGGCTGGGATTGCTGGGTTAGCCTTCTG  330

seq1  GGTAGATCCCACAGTAGAGCTTTGGGAACCTTCACCAAGCTGAGGGGTGA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGATCCCACAGTAGAGCTTTGGGAACCTTCACCAAGCTGAGGGGTGA  380

seq1  TGATTCCTTCCCTGTTCGTGCTCCTTTTTCTACTGTGCCATCCTGAATGT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCCTTCCCTGTTCGTGCTCCTTTTTCTACTGTGCCATCCTGAATGT  430

seq1  TTCTTTCACCTGTACGATCAGTTACCAGTGGGCAAACAGTCCTCAGTTAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCACCTGTACGATCAGTTACCAGTGGGCAAACAGTCCTCAGTTAA  480

seq1  TCGTGGAATGGAATTCTGCACTAAACCAGGAATTAAGTATTGGGTTCAAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTGGAATGGAATTCTGCACTAAACCAGGAATTAAGTATTGGGTTCAAG  530

seq1  CCCTGCCCTTAGACATCTTATAACCAGAATATCACTGTTACATATTATTC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCCCTTAGACATCTTATAACCAGAATATCACTGTTACATATTATTC  580

seq1  AATATCTGGTTGGCATTCATGAAGTTACAATGGAATCATGTCACTTAATG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCTGGTTGGCATTCATGAAGTTACAATGGAATCATGTCACTTAATG  630

seq1  GTCACAATTCTCCAGAAAACTTATAAACAGTTCACACAATAAGTGAGAGG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACAATTCTCCAGAAAACTTATAAACAGTTCACACAATAAGTGAGAGG  680

seq1  CAGAGAAAAGGTTTGAACTTGAGCATTCTGCTTCAAGAATTCTTAGGTTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAAAAGGTTTGAACTTGAGCATTCTGCTTCAAGAATTCTTAGGTTT  730

seq1  CCCATTCATCAGTTTCATATTCCTTGTGATCCCATATGTATCTACTTCAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTCATCAGTTTCATATTCCTTGTGATCCCATATGTATCTACTTCAA  780

seq1  CCTTGGGAAAGCTCTATTCTCTGAGCTCGGTTTTCTTTACCAATGAGGAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGGAAAGCTCTATTCTCTGAGCTCGGTTTTCTTTACCAATGAGGAT  830

seq1  TCCTCCACCCACTCTGTACCCAGTATCATGATAGATGTTAACTTTACCCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCACCCACTCTGTACCCAGTATCATGATAGATGTTAACTTTACCCT  880

seq1  CCCCCCAAAGGTGTCAGGTACTCAGGGATAACTTGTTTGGTCAGGTCACA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCAAAGGTGTCAGGTACTCAGGGATAACTTGTTTGGTCAGGTCACA  930

seq1  CAACTAGTAGATGACAGGTTTGAGGCTTTGTTTGCTAGCAGTGTGGGGTC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTAGTAGATGACAGGTTTGAGGCTTTGTTTGCTAGCAGTGTGGGGTC  980

seq1  CCTTTTCTCTCCATACTTGCTAAACCAGAGGATGTAGGGATGTGTGGATG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTCTCTCCATACTTGCTAAACCAGAGGATGTAGGGATGTGTGGATG  1030

seq1  GTCATTAGTGTGCTCACAGGCAGCTGAGGTTTGGGCCCTCTACTTGGAGA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTAGTGTGCTCACAGGCAGCTGAGGTTTGGGCCCTCTACTTGGAGA  1080

seq1  AACACTGAAGAAACTGAGCCATGAATTCTGGCATCTCCATGGATCTACAT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTGAAGAAACTGAGCCATGAATTCTGGCATCTCCATGGATCTACAT  1130

seq1  GCAAGCAGGAGACCTGAATTC  1170
      |||||||||||||||||||||
seq2  GCAAGCAGGAGACCTGAATTC  1151