BAC Information

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BAC

Clone NameB6Ng01-072E15
Chromosome18 (Build37)
Map Location 32,860,953 - 32,934,337
singlet/doubletdoublet
Overlap geneLOC100041170
Upstream geneSap130, LOC640549, Ammecr1l, Polr2d, EG626327, Wdr33, Sft2d3, Lims2, Gpr17, Myo7b, Iws1, Proc, LOC546710, Map3k2, Ercc3, Bin1, Gypc, LOC100041160
Downstream geneTslp, Wdr36, Camk4, Stard4, EG433170, D0H4S114, ENSMUSG00000073610, LOC666281, LOC100041258
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-072E15.bB6Ng01-072E15.g
ACCDH889747DH889748
length1,1281,110
definitionDH889747|Mus musculus domesticus DNA, BAC clone: B6Ng01-072E15, 5' end.DH889748|Mus musculus domesticus DNA, BAC clone: B6Ng01-072E15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,933,204 - 32,934,337)(32,860,953 - 32,862,066)
sequence
gaattcactagctcatcaccaaaggaacaaaggacaataggcaaattggg
gacactttattgatgctgaggtcacactaggctagacttgagtgatcttt
ggttctgtaagagctctgagattcatggatgagaggtcgcagcacagagt
aacaggccatcaccctggaatgaggacagactcatatatttgagttatga
ttctgttgcttattggataaagttaaggctatcattttaactctgcaatc
ccggttccttgtgagtgacattatcaacatctgtagtattgtgaggggta
aatgagacagttgtaagccccaggaagggttatgtccattgttattattt
gtggttctccttctattacatgatagctagaaaacaaggcttattggtgt
aattcttctagagacacatttactccatataactacagtgaacaacaata
tggaccatatgctctagaattcaatgtttaacatttttatgggttggcaa
gatgggtgagtgagtaagggtgtcggctgccaagcctgatgaccagagct
taatccctgaaactcatagaacggaaggaaagaaccaactgttgcaacat
actccctggctcatctcccttcctcttccttctaaatgataatagaaaaa
aataacactctgaattcttactaatgcttaaaaacaacaacaacaaaacc
ttttttctttcctcccctcccccagtggctagaattcatttaaaggaatc
gtgttggagagaaagatgttttgttgacttttcaaatttttcatttaagt
aaaaataaggactttttctcttttagtatgaatggacatttaaagctcac
acccgaataatcaagtgatatttgattttcagagcattttgtcgagatct
cacacaggcacacccatgtgtattatcagcatgggactggggtgagggga
agagagctgggagggaaagggaagtggccatggtacctctggaagggagc
tgagaacctccgtggaggggtctcgcccatcgaagcgctctgatgttaga
agttaaaggtaagtctaagcattgtcctactctgactctaaccttagaaa
ttatttctgtccatggaaccttgagtga
gaattcctgtttccacaagcatgaatgacagcacctgaggaatggtacct
ctggcctccacatgcatgtgcttgtgcacccacatgagcacacgtgcata
cacacacatacacacatacatacatacatacatatgcaagagtttggact
ggtaaagaggtttaaccttgaaatattagctgttatgctgcctgcactgc
cagtgtgaggagaggagacgtattcacggaggaacagtgaaaggctaaaa
ggtacttggcatgctttaggcaatcaatactcaacacttgtaactcatgt
aacaaacaagttctgtaattagttattgttgccaatgccgcattgaagtc
aggagtgataaggacacgtacttttcgtcacacaaagtaccttttagaca
gatgcgagtgccgatttgaccaaccagtctgtggtgacttgttcctcatt
cttattcaatatctgaaccacacatgccctacctggctccatgctgtcgc
aggacgtggtttgcattcctaattactcctggttggtttcacagatttat
catgtcttttcaactagacagaaatcttgggacaaattttgatttctttt
gtgtttctgtgcacctctgctggctttaaaaacacatgcatgcaaatgga
taggctaggaagggcgctgttctttgtcttgcctctgtcttctggttttc
tgctgtgacaaggtcattccgggaacactgaagaaagataattcaggcat
ttggctgtagtcaacttctgttgctggagccagagtttgcactctggcat
gcaaatccttgcaagaactggcaggtctcacgctttacctgaagcaatgc
ttggtcctgccttagacaaacttatagaactgagagtagtcatgggtttc
atatctatttatcttcagtctagtagagtagggggaaagtgccaagatat
ttagtaagacatcaagaatatgcacaaaggaaattttctcttctcgactt
tgcatgaccttactttaaagttacaaaataaaagggagacaggggtggtg
ccccccatcaataattccagtacttgggaggcagaagtaaatagaattgc
tctctgagtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_32933204_32934337
seq2: B6Ng01-072E15.b_44_1171 (reverse)

seq1  TCACTCAAGGTTCCCATGGTGACAGAATTTATTTTCTAGTGTTAGAGTCA  50
      |||||||||||| |||||  |||||||  || ||||||  ||||||||||
seq2  TCACTCAAGGTT-CCATG--GACAGAA-ATAATTTCTAAGGTTAGAGTCA  46

seq1  GAGTAGGACAATGCTTATGACTCACCTTTAACTTCTAACATCAGAGCGCT  100
      ||||||||||||||||| |||| |||||||||||||||||||||||||||
seq2  GAGTAGGACAATGCTTA-GACTTACCTTTAACTTCTAACATCAGAGCGCT  95

seq1  CTGATGGGCGAGACCCCT-CACGGAGGTTCTCAGCTCCCCTTCCAGAAGG  149
        |||||||||||||||| ||||||||||||||||| ||||||||| |||
seq2  TCGATGGGCGAGACCCCTCCACGGAGGTTCTCAGCT-CCCTTCCAG-AGG  143

seq1  TACCATGGCCACTCTCCTTTCCCT-CCAGCTCTCTTCCCCCTCACCCCAG  198
      |||||||||||||  ||||||||| ||||||||||| |||||||||||||
seq2  TACCATGGCCACTTCCCTTTCCCTCCCAGCTCTCTT-CCCCTCACCCCAG  192

seq1  TCCCATGCTGATAATACACATGGGTGTGCCTGTGTGAGATCTCGACAAAA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATGCTGATAATACACATGGGTGTGCCTGTGTGAGATCTCGACAAAA  242

seq1  TGCTCTGAAAATCAAATATCACTTGATTATTCGGGTGTGAGCTTTAAATG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTGAAAATCAAATATCACTTGATTATTCGGGTGTGAGCTTTAAATG  292

seq1  TCCATTCATACTAAAAGAGAAAAAGTCCTTATTTTTACTTAAATGAAAAA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTCATACTAAAAGAGAAAAAGTCCTTATTTTTACTTAAATGAAAAA  342

seq1  TTTGAAAAGTCAACAAAACATCTTTCTCTCCAACACGATTCCTTTAAATG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAAAGTCAACAAAACATCTTTCTCTCCAACACGATTCCTTTAAATG  392

seq1  AATTCTAGCCACTGGGGGAGGGGAGGAAAGAAAAAAGGTTTTGTTGTTGT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTAGCCACTGGGGGAGGGGAGGAAAGAAAAAAGGTTTTGTTGTTGT  442

seq1  TGTTTTTAAGCATTAGTAAGAATTCAGAGTGTTATTTTTTTCTATTATCA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTAAGCATTAGTAAGAATTCAGAGTGTTATTTTTTTCTATTATCA  492

seq1  TTTAGAAGGAAGAGGAAGGGAGATGAGCCAGGGAGTATGTTGCAACAGTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAAGGAAGAGGAAGGGAGATGAGCCAGGGAGTATGTTGCAACAGTT  542

seq1  GGTTCTTTCCTTCCGTTCTATGAGTTTCAGGGATTAAGCTCTGGTCATCA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCTTTCCTTCCGTTCTATGAGTTTCAGGGATTAAGCTCTGGTCATCA  592

seq1  GGCTTGGCAGCCGACACCCTTACTCACTCACCCATCTTGCCAACCCATAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTGGCAGCCGACACCCTTACTCACTCACCCATCTTGCCAACCCATAA  642

seq1  AAATGTTAAACATTGAATTCTAGAGCATATGGTCCATATTGTTGTTCACT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTTAAACATTGAATTCTAGAGCATATGGTCCATATTGTTGTTCACT  692

seq1  GTAGTTATATGGAGTAAATGTGTCTCTAGAAGAATTACACCAATAAGCCT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTTATATGGAGTAAATGTGTCTCTAGAAGAATTACACCAATAAGCCT  742

seq1  TGTTTTCTAGCTATCATGTAATAGAAGGAGAACCACAAATAATAACAATG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTCTAGCTATCATGTAATAGAAGGAGAACCACAAATAATAACAATG  792

seq1  GACATAACCCTTCCTGGGGCTTACAACTGTCTCATTTACCCCTCACAATA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATAACCCTTCCTGGGGCTTACAACTGTCTCATTTACCCCTCACAATA  842

seq1  CTACAGATGTTGATAATGTCACTCACAAGGAACCGGGATTGCAGAGTTAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAGATGTTGATAATGTCACTCACAAGGAACCGGGATTGCAGAGTTAA  892

seq1  AATGATAGCCTTAACTTTATCCAATAAGCAACAGAATCATAACTCAAATA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATAGCCTTAACTTTATCCAATAAGCAACAGAATCATAACTCAAATA  942

seq1  TATGAGTCTGTCCTCATTCCAGGGTGATGGCCTGTTACTCTGTGCTGCGA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGTCTGTCCTCATTCCAGGGTGATGGCCTGTTACTCTGTGCTGCGA  992

seq1  CCTCTCATCCATGAATCTCAGAGCTCTTACAGAACCAAAGATCACTCAAG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCATCCATGAATCTCAGAGCTCTTACAGAACCAAAGATCACTCAAG  1042

seq1  TCTAGCCTAGTGTGACCTCAGCATCAATAAAGTGTCCCCAATTTGCCTAT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGCCTAGTGTGACCTCAGCATCAATAAAGTGTCCCCAATTTGCCTAT  1092

seq1  TGTCCTTTGTTCCTTTGGTGATGAGCTAGTGAATTC  1134
      ||||||||||||||||||||||||||||||||||||
seq2  TGTCCTTTGTTCCTTTGGTGATGAGCTAGTGAATTC  1128

seq1: chr18_32860953_32862066
seq2: B6Ng01-072E15.g_68_1177

seq1  GAATTCCTGTTTCCACAAGCATGAATGACAGCACCTGAGGAATGGTACCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGTTTCCACAAGCATGAATGACAGCACCTGAGGAATGGTACCT  50

seq1  CTGGCCTCCACATGCATGTGCTTGTGCACCCACATGAGCACACGTGCATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCTCCACATGCATGTGCTTGTGCACCCACATGAGCACACGTGCATA  100

seq1  CACACACATACACACATACATACATACATACATATGCAAGAGTTTGGACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACATACACACATACATACATACATACATATGCAAGAGTTTGGACT  150

seq1  GGTAAAGAGGTTTAACCTTGAAATATTAGCTGTTATGCTGCCTGCACTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAAGAGGTTTAACCTTGAAATATTAGCTGTTATGCTGCCTGCACTGC  200

seq1  CAGTGTGAGGAGAGGAGACGTATTCACGGAGGAACAGTGAAAGGCTAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTGAGGAGAGGAGACGTATTCACGGAGGAACAGTGAAAGGCTAAAA  250

seq1  GGTACTTGGCATGCTTTAGGCAATCAATACTCAACACTTGTAACTCATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACTTGGCATGCTTTAGGCAATCAATACTCAACACTTGTAACTCATGT  300

seq1  AACAAACAAGTTCTGTAATTAGTTATTGTTGCCAATGCCGCATTGAAGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAACAAGTTCTGTAATTAGTTATTGTTGCCAATGCCGCATTGAAGTC  350

seq1  AGGAGTGATAAGGACACGTACTTTTCGTCACACAAAGTACCTTTTAGACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTGATAAGGACACGTACTTTTCGTCACACAAAGTACCTTTTAGACA  400

seq1  GATGCGAGTGCCGATTTGACCAACCAGTCTGTGGTGACTTGTTCCTCATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCGAGTGCCGATTTGACCAACCAGTCTGTGGTGACTTGTTCCTCATT  450

seq1  CTTATTCAATATCTGAACCACACATGCCCTACCTGGCTCCATGCTGTCGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTCAATATCTGAACCACACATGCCCTACCTGGCTCCATGCTGTCGC  500

seq1  AGGACGTGGTTTGCATTCCTAATTACTCCTGGTTGGTTTCACAGATTTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACGTGGTTTGCATTCCTAATTACTCCTGGTTGGTTTCACAGATTTAT  550

seq1  CATGTCTTTTCAACTAGACAGAAATCTTGGGACAAATTTTGATTTCTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTCTTTTCAACTAGACAGAAATCTTGGGACAAATTTTGATTTCTTTT  600

seq1  GTGTTTCTGTGCACCTCTGCTGGCTTTAAAAACACATGCATGCAAATGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTCTGTGCACCTCTGCTGGCTTTAAAAACACATGCATGCAAATGGA  650

seq1  TAGGCTAGGAAGGGCGCTGTTCTTTGTCTTGCCTCTGTCTTCTGGTTTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCTAGGAAGGGCGCTGTTCTTTGTCTTGCCTCTGTCTTCTGGTTTTC  700

seq1  TGCTGTGACAAGGTCATTCCGGGAACACTGAAGAAAGATAATTCAGGCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTGACAAGGTCATTCCGGGAACACTGAAGAAAGATAATTCAGGCAT  750

seq1  TTGGCTGTAGTCAACTTCTGTTGCTGGAGCCAGAGTTTGCACTCTGGCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTGTAGTCAACTTCTGTTGCTGGAGCCAGAGTTTGCACTCTGGCAT  800

seq1  GCAAATCCTTGCAAGAACTGGCAGGTCTCAGGCTTTACCTGAAGCAATGC  850
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GCAAATCCTTGCAAGAACTGGCAGGTCTCACGCTTTACCTGAAGCAATGC  850

seq1  TTGGTCCTGCCTTAGACAAACTTATAGAACTGAGAGTAGTCATGGGTTTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTCCTGCCTTAGACAAACTTATAGAACTGAGAGTAGTCATGGGTTTC  900

seq1  ATATCTATTTATCTTCAGTCTAGGTAGAGTAGGGGGAAAAGTGCCAAGAT  950
      |||||||||||||||||||||| ||||||||||||| |||||||||||||
seq2  ATATCTATTTATCTTCAGTCTA-GTAGAGTAGGGGG-AAAGTGCCAAGAT  948

seq1  ATTTAGTAAGACATCAAGAATATGCACAAAGGAAAATTTTCCTCTTCTCA  1000
      |||||||||||||||||||||||||||||||||||  ||| |||||||| 
seq2  ATTTAGTAAGACATCAAGAATATGCACAAAGGAAA--TTTTCTCTTCTC-  995

seq1  GACCTTTGGCATGACCTTACTTTAAAAGTTACAAAATAAAA-GGAGACAG  1049
      |||  || ||||||||||||||| ||||||||||||||||| ||||||||
seq2  GAC--TTTGCATGACCTTACTTT-AAAGTTACAAAATAAAAGGGAGACAG  1042

seq1  GTGTGGTGCCCCACATCAATAATTCCAGTACTTGGGAGGCAGAGGT-AAT  1098
      | |||||||||| |||||||||||||||||||||||||||||| || |||
seq2  GGGTGGTGCCCCCCATCAATAATTCCAGTACTTGGGAGGCAGAAGTAAAT  1092

seq1  AGGATTG--CTCTGAGTT  1114
      || ||||  |||||||||
seq2  AGAATTGCTCTCTGAGTT  1110