BAC Information

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BAC

Clone NameB6Ng01-074O23
Chromosome18 (Build37)
Map Location 63,011,308 - 63,152,395
singlet/doubletdoublet
Overlap geneApcdd1, Napg
Upstream geneAblim3, Sh3tc2, Adrb2, Htr4, Fbxo38, Spink10, EG408198, 2700046A07Rik
Downstream gene9430028L06Rik, 9030411M15Rik, LOC627792, Txnl1, Wdr7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-074O23.bB6Ng01-074O23.g
ACCDH891646DH891647
length976419
definitionDH891646|Mus musculus domesticus DNA, BAC clone: B6Ng01-074O23, 5' end.DH891647|Mus musculus domesticus DNA, BAC clone: B6Ng01-074O23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(63,011,308 - 63,012,190)(63,151,971 - 63,152,395)
sequence
gaattcttcatcccaaggagggtgactgtgctaggagcctgtaggtctat
tcctttgggagaaatgagcaatgtgaacaactatattagatggcaccttc
ctatgtggtccactactttctcattccaaaacgttgtttcttggggtttt
gacctgcctctgtcagtagatatagctcatgatcattttattcatattat
aaatctagacacctgtcagagaccatcctcacatgagcaacaaatgccct
gggatgctattctcctcagcctcggctgtgcaaagtgaatgtcttttcaa
ggatgtccatccaaattagaagatatttggtttgtttctcattgcctgag
tgaccagtgaggtggagcgccttttcctgtatagaaccaactccagtcat
cgctgctctgaaatatgcatggatatggattgtccacccaagtacagcaa
cccacccgtggccaacacccctcccacatccacagctaacaactgccaag
aactcttccgtcaggggtggagcctctcaagctcctccccaccccatgct
ggaatgttgatcatgtgtaggtctagtacagataggtaaccaagactgtt
cttttttgtcatgtgtattcttggttgccttgttagaagttagtgactgt
attaggtgatttatttctgtttagctcactggtctgtgtgcctttattat
tattattattattattattattattattattattatcattataccttact
gtttgggtcagtatggctttgcaatataatttcgaatcaagaagattttt
ttttctttcaagatgtttttggctactcaggatagtttgtacaaagttta
gtctttgtactggtctgtgaataatgcttctggcattttgacagagaatt
gcaatctatatattgccccagataacataaggcatccaaacagtttgaac
tctttttcacccatgaacagggggtt
tgggctgctccctagacttctgggattgttacactgcgcaggctgctgtc
attctcagtgtgatttaactgcactcaaccctcccaggttcacgccaaag
actgtggcttgcttctggtgggcggtgcttctgacctcagttccagtctt
ctgttgtgatctttgggtctgctgcagaatttcagacaggatcagagatt
tagtggtttcagtctttcttcaattctcagaatagtcactcctaccttgg
gtctgtcccaggtacccacggccaagatttgtgtgggccacacacatagg
ggattcccttttcccaagtgctcctcctccctgggatctgttcctgttct
cttggttcccgtgccagttctttcagctggagaccagaactcaacctaag
ccaagtgggaggggggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_63011308_63012190
seq2: B6Ng01-074O23.b_47_930

seq1  GAATTCTTCATCCCAAGGAGGGTGACTGTGCTAGGAGCCTGTAGGTCTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCATCCCAAGGAGGGTGACTGTGCTAGGAGCCTGTAGGTCTAT  50

seq1  TCCTTTGGGAGAAATGAGCAATGTGAACAACTATATTAGATGGCACCTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTGGGAGAAATGAGCAATGTGAACAACTATATTAGATGGCACCTTC  100

seq1  CTATGTGGTCCACTACTTTCTCATTCCAAAACGTTGTTTCTTGGGGTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGTGGTCCACTACTTTCTCATTCCAAAACGTTGTTTCTTGGGGTTTT  150

seq1  GACCTGCCTCTGTCAGTAGATATAGCTCATGATCATTTTATTCATATTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTGCCTCTGTCAGTAGATATAGCTCATGATCATTTTATTCATATTAT  200

seq1  AAATCTAGACACCTGTCAGAGACCATCCTCACATGAGCAACAAATGCCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTAGACACCTGTCAGAGACCATCCTCACATGAGCAACAAATGCCCT  250

seq1  GGGATGCTATTCTCCTCAGCCTCGGCTGTGCAAAGTGAATGTCTTTTCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGCTATTCTCCTCAGCCTCGGCTGTGCAAAGTGAATGTCTTTTCAA  300

seq1  GGATGTCCATCCAAATTAGAAGATATTTGGTTTGTTTCTCATTGCCTGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTCCATCCAAATTAGAAGATATTTGGTTTGTTTCTCATTGCCTGAG  350

seq1  TGACCAGTGAGGTGGAGCGCCTTTTCCTGTATAGAACCAACTCCAGTCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCAGTGAGGTGGAGCGCCTTTTCCTGTATAGAACCAACTCCAGTCAT  400

seq1  CGCTGCTCTGAAATATGCATGGATATGGATTGTCCACCCAAGTACAGCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTGCTCTGAAATATGCATGGATATGGATTGTCCACCCAAGTACAGCAA  450

seq1  CCCACCCGTGGCCAACACCCCTCCCACATCCACAGCTAACAACTGCCAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCCGTGGCCAACACCCCTCCCACATCCACAGCTAACAACTGCCAAG  500

seq1  AACTCTTCCGTCAGGGGTGGAGCCTCTCAAGCTCCTCCCCACCCCATGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTTCCGTCAGGGGTGGAGCCTCTCAAGCTCCTCCCCACCCCATGCT  550

seq1  GGAATGTTGATCATGTGTAGGTCTAGTACAGATAGGTAACCAAGACTGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGTTGATCATGTGTAGGTCTAGTACAGATAGGTAACCAAGACTGTT  600

seq1  CTTTTTTGTCATGTGTATTCTTGGTTGCCTTGTTAGAAGTTAGTGACTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTGTCATGTGTATTCTTGGTTGCCTTGTTAGAAGTTAGTGACTGT  650

seq1  ATTAGGTGATTTATTTCTGTTTAGCTCACTGGTCTGTGTGCCTTTATTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGGTGATTTATTTCTGTTTAGCTCACTGGTCTGTGTGCCTTTATTAT  700

seq1  TATTATTATTATTATTATTATTATTATTATTATTATCATTATACCTTACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTATTATTATTATTATTATTATTATTATTATCATTATACCTTACT  750

seq1  GTTTGGGTCAGTATGGCTTTGCAATATAATTTCGAATCAAGAAGA-TTTT  799
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GTTTGGGTCAGTATGGCTTTGCAATATAATTTCGAATCAAGAAGATTTTT  800

seq1  TTTTCTTTCAAGATGTTTTTGGCTACTCAGGATAGTTTGTACAAAGTTTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTCAAGATGTTTTTGGCTACTCAGGATAGTTTGTACAAAGTTTA  850

seq1  GTCTTTGTACTGGTCTGTGAATAATGCTTCTGGC  883
      ||||||||||||||||||||||||||||||||||
seq2  GTCTTTGTACTGGTCTGTGAATAATGCTTCTGGC  884

seq1: chr18_63151971_63152395
seq2: B6Ng01-074O23.g_71_495 (reverse)

seq1  CCTCCCCCCTCCCACTTGGCTTAGGTTGAGTTCTGGTCTCCAGCTGAAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCCCCTCCCACTTGGCTTAGGTTGAGTTCTGGTCTCCAGCTGAAAG  50

seq1  AACTGGCACGGGAACCAAGAGAACAGGAACAGATCCCAGGGAGGAGGAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGCACGGGAACCAAGAGAACAGGAACAGATCCCAGGGAGGAGGAGC  100

seq1  ACTTGGGAAAAGGGAATCCCCTATGTGTGTGGCCCACACAAATCTTGGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGGAAAAGGGAATCCCCTATGTGTGTGGCCCACACAAATCTTGGCC  150

seq1  GTGGGTACCTGGGACAGACCCAAGGTAGGAGTGACTATTCTGAGAATTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTACCTGGGACAGACCCAAGGTAGGAGTGACTATTCTGAGAATTGA  200

seq1  AGAAAGACTGAAACCACTAAATCTCTGATCCTGTCTGAAATTCTGCAGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGACTGAAACCACTAAATCTCTGATCCTGTCTGAAATTCTGCAGCA  250

seq1  GACCCAAAGATCACAACAGAAGACTGGAACTGAGGTCAGAAGCACCGCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCAAAGATCACAACAGAAGACTGGAACTGAGGTCAGAAGCACCGCCC  300

seq1  ACCAGAAGCAAGCCACAGTCTTTGGCGTGAACCTGGGAGGGTTGAGTGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGAAGCAAGCCACAGTCTTTGGCGTGAACCTGGGAGGGTTGAGTGCA  350

seq1  GTTAAATCACACTGAGAATGACAGCAGCCTGCGCAGTGTAACAATCCCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAATCACACTGAGAATGACAGCAGCCTGCGCAGTGTAACAATCCCAG  400

seq1  AAGTCTAGGGAGCAGCCCAGAATTC  425
      |||||||||||||||||||||||||
seq2  AAGTCTAGGGAGCAGCCCAGAATTC  425