BAC Information

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BAC

Clone NameB6Ng01-075I07
Chromosome18 (Build37)
Map Location 81,678,352 - 81,679,483
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039336, A430076E10Rik, LOC100039348, Nfatc1, Atp9b, Sall3, LOC665124
Downstream geneLOC100039458, LOC100040871, B020010K11Rik, Galr1, Mbp
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-075I07.bB6Ng01-075I07.g
ACCDH892057DH892058
length1,1231,247
definitionDH892057|Mus musculus domesticus DNA, BAC clone: B6Ng01-075I07, 5' end.DH892058|Mus musculus domesticus DNA, BAC clone: B6Ng01-075I07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgaggaaatccaaataaagtcaggagtccttactgaccacatca
cacaggtgttgctttttaaatcatgacaggtttattgtgctcatatacta
ttgttggcaaccaaggaagctgagtgtgggctcactgctcatctatggga
tgttttgagcataattctagaacttttgtaaatagaagcacagttttcag
atctgtgcttttgcagtggactgtgagaatttcaggaggtgggtatgaac
tgcatagattcccacatttgccacatagcagtcaccaacgtccctttcag
tccttataacaaacccagcctgtaataactggttatgccttttgtgatct
gtgttctttctcaattgtctgctcccttgttccctaccatccttcccaca
tgctagactgaaccattgtgcagtcttagtatctggcctttctgcatgtc
tccctgagaacgcactgagggacccagcttcctttgcaaaagccgagaca
cacactgtgcacacatctacgtgtttttaacctgtataactactctccca
gcagctggtggatctctgcattgcctttcctaacatctgcataataaccc
ataggatgactctcctatgtttatttaacattttctcctaggtttttttt
ttgttgttgtttgttttaaatgcctcaagtgatgttccaaatctgtggcc
agcatcaaggtttgaaatgagcaacatttattaaaaaaaaaaaaaaaaag
aagaaagaaatggcgtaaatgtccacatttgttatttttagtagacattt
atttgtaattatttttaaattatttatgtgtctgtgtgtgtctgtgtatt
tgcacacgtgccttgacatgcatgtgggtgttagagggcagctaggtgtc
ctttcacagtgtgggaattgaacttgggtcatcagcctggtggcaatcac
ttttacctgcagttttatctctttggccctctgtctgatttttaatagag
catgtgtgtctttttgttgaaggtgtgctgagattatctttaatttttag
tgcttgtatatttcaggtctcctgaatggttctttgctgtgagttcacct
tcctatttcagttagtctccagg
gaattctcatgtataccagccttggttgtgtaaactttgctccataattt
aaaactattggttaaataaatgtggctgacagccaattgctggggagaat
agaggtcggcgggggtttccattaacagacaggggatcacaggtaggaat
gaccaggagagaggaaaaggagaaagaagatggagagaaccagaggtctc
cattagacatgatggatcaggagcatgtggccaggctgatggagcagcaa
tgatctgggtgagattcagacaagtatgtggggagtgcagttggggaatt
aactgtctagtttatagaaaaacagattaggggtagttcacccagcaatt
gtgataaaactgatttaaaaatcctcaggactctgctttggttattgggg
actttctgggtcatattaataactaatagagttattaaataatattttaa
aatacaagttgatggttcctaggggagagatggtctgttttctttaagga
tgtggctcaggggaggtcaaccagtctccaatggctaactgtccttattc
ccccagaagtatatggagagaacaaatttgagtcagtgagtaattacatt
taaattaaaaaaagagagagagtgcatgaatttgagggtttagggaaggg
gctagtcagggaagagtagaggggaaaagttggggtgaacatgatcaagg
tacattgtataaaattctccaagaatcagtaacgatacatttaaagggct
agagacatggctcagctattaatagcacttgctgctattgcagagaactt
aagttctgttcccagcagtcactggactgtctggaactccactttcagga
gatctgattcctcctctgaccttcttgatcaccaggcacacaagtagtgt
acatgcatacatacatggaatacattcaaacgcataaaataaaatgttcc
tgacatatatttatttacttattaacttgcaagcacatgcctgtgcattt
ctgtgcacatgctcagaggccagaagagggggctgaatgcccctccctcc
tcttcttgactattgtgtctttcacaccttcagtcgtgaccattaaagtt
tgggttacaggtttgtgcagatcccagctttatatcagggggtcctagtt
cgaacttacattcttatggagggcagcagtgtccttatctaagtaatcgg
aatcaaaggcctctatcgtgacagaatcaacgtttctgatcaacgtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_81678352_81679483
seq2: B6Ng01-075I07.b_46_1168

seq1  GAATTCTGAGGAAATCCAAATAAAGTCAGGAGTCCTTACTGACCACATCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAGGAAATCCAAATAAAGTCAGGAGTCCTTACTGACCACATCA  50

seq1  CACAGGTGTTGCTTTTTAAATCATGACAGGTTTATTGTGCTCATATACTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGTGTTGCTTTTTAAATCATGACAGGTTTATTGTGCTCATATACTA  100

seq1  TTGTTGGCAACCAAGGAAGCTGAGTGTGGGCTCACTGCTCATCTATGGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGGCAACCAAGGAAGCTGAGTGTGGGCTCACTGCTCATCTATGGGA  150

seq1  TGTTTTGAGCATAATTCTAGAACTTTTGTAAATAGAAGCACAGTTTTCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGAGCATAATTCTAGAACTTTTGTAAATAGAAGCACAGTTTTCAG  200

seq1  ATCTGTGCTTTTGCAGTGGACTGTGAGAATTTCAGGAGGTGGGTATGAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTGCTTTTGCAGTGGACTGTGAGAATTTCAGGAGGTGGGTATGAAC  250

seq1  TGCATAGATTCCCACATTTGCCACATAGCAGTCACCAACGTCCCTTTCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATAGATTCCCACATTTGCCACATAGCAGTCACCAACGTCCCTTTCAG  300

seq1  TCCTTATAACAAACCCAGCCTGTAATAACTGGTTATGCCTTTTGTGATCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTATAACAAACCCAGCCTGTAATAACTGGTTATGCCTTTTGTGATCT  350

seq1  GTGTTCTTTCTCAATTGTCTGCTCCCTTGTTCCCTACCATCCTTCCCACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCTTTCTCAATTGTCTGCTCCCTTGTTCCCTACCATCCTTCCCACA  400

seq1  TGCTAGACTGAACCATTGTGCAGTCTTAGTATCTGGCCTTTCTGCATGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAGACTGAACCATTGTGCAGTCTTAGTATCTGGCCTTTCTGCATGTC  450

seq1  TCCCTGAGAACGCACTGAGGGACCCAGCTTCCTTTGCAAAAGCCGAGACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGAGAACGCACTGAGGGACCCAGCTTCCTTTGCAAAAGCCGAGACA  500

seq1  CACACTGTGCACACATCTACGTGTTTTTAACCTGTATAACTACTCTCCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTGTGCACACATCTACGTGTTTTTAACCTGTATAACTACTCTCCCA  550

seq1  GCAGCTGGTGGATCTCTGCATTGCCTTTCCTAACATCTGCATAATAACCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTGGTGGATCTCTGCATTGCCTTTCCTAACATCTGCATAATAACCC  600

seq1  ATAGGATGACTCTCCTATGTTTATTTAACATTTTCTCCTAGGTTTTTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGATGACTCTCCTATGTTTATTTAACATTTTCTCCTAGGTTTTTTTT  650

seq1  TTGTTGTTGTTTGTTTTAAATGCCTCAAGTGATGTTCCAAATCTGTGGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGTTGTTTGTTTTAAATGCCTCAAGTGATGTTCCAAATCTGTGGCC  700

seq1  AGCATCAAGGTTTGAAATGAGCAACATTTATTAAAAAAAAAAAAAAAAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCAAGGTTTGAAATGAGCAACATTTATTAAAAAAAAAAAAAAAAAG  750

seq1  AAGAAAGAAATGGCGTAAATGTCCACATTTGTTATTTTTAGTAGACATTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGAAATGGCGTAAATGTCCACATTTGTTATTTTTAGTAGACATTT  800

seq1  ATTTGTAATTATTTTTAAATTATTTATGTGTCTGTGTGTGTCTGTGTATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTAATTATTTTTAAATTATTTATGTGTCTGTGTGTGTCTGTGTATT  850

seq1  TGCACACGTGCCTTGACATGCATGTGGGTGTTAGAGGGCAGCTAGGTGTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACACGTGCCTTGACATGCATGTGGGTGTTAGAGGGCAGCTAGGTGTC  900

seq1  CTTTCACAGTGTGGGAATTGAACTTGGGTCATCAGGCCTGGTGGCAATCA  950
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CTTTCACAGTGTGGGAATTGAACTTGGGTCATCA-GCCTGGTGGCAATCA  949

seq1  CTTTTACCTGCAGTTTTATCTCTTTGGCCCTCTGTCTGATTTTTAAATAG  1000
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CTTTTACCTGCAGTTTTATCTCTTTGGCCCTCTGTCTGATTTTT-AATAG  998

seq1  AGCATGTGTGTC-TTTTGTTGAAGGTGTGGCTGAGATTATCTTTAATATT  1049
      |||||||||||| ||||||||||||||| |||||||||||||||||| ||
seq2  AGCATGTGTGTCTTTTTGTTGAAGGTGT-GCTGAGATTATCTTTAAT-TT  1046

seq1  TTAGGTGCTTGGTATA-TTCAGGTCTCCCTGAATGGTTCTTTGGCTGTGA  1098
      ||| |||||| ||||| ||||||||| ||||||||||||||| |||||||
seq2  TTA-GTGCTT-GTATATTTCAGGTCT-CCTGAATGGTTCTTT-GCTGTGA  1092

seq1  GTTTCACCTTTCCTATTTCAGTTATGTCTCCAGG  1132
      | |||||| ||||||||||||||| |||||||||
seq2  G-TTCACC-TTCCTATTTCAGTTA-GTCTCCAGG  1123