BAC Information

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BAC

Clone NameB6Ng01-079F08
Chromosome18 (Build37)
Map Location 47,704,461 - 47,705,009
singlet/doubletsinglet
Overlap geneA730092B10
Upstream geneTicam2, Eif1a, LOC100042226, Cdo1, Atg12, Ap3s1, LOC100042950, 4833403I15Rik, LOC666798, Gm949, LOC100042241, Commd10, EG628438, LOC667120, Sema6a, LOC628477, 9130209A04Rik
Downstream geneLOC383325, LOC100042982, LOC100042284, LOC100042301, EG433182, LOC383326, LOC100042323
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-079F08.bB6Ng01-079F08.g
ACCDH894772DH894773
length99491
definitionDH894772|Mus musculus domesticus DNA, BAC clone: B6Ng01-079F08, 5' end.DH894773|Mus musculus domesticus DNA, BAC clone: B6Ng01-079F08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcctagccaataggatctatgcgccacagagtacatacatctac
tgggctgagtagttgtatgtcgtttgacacaagctaaagttgcctggaaa
aggggagcctcgatggagaaaatgccttcttgaaatacagctgtaaggca
ttttcttaattagtgattgatgggcgagggcctagcccattattctggtg
ccatccctgggctggtggtcctgggttctatatgcaggctgagtaagtca
tgcaagcaagccagtgagcggcacccatccatggcctctgcctcagctct
tatctccacgttccagacccccctcccctccagttcctatcctgccttcc
ttcagtgtcagactatcctgtggaagtgtaagccaaataaaccctttcct
ccccaacttgctttcggtcatggtgtttcatcacagcaatagaaacctta
actaggacaacttctcaaaaaaaatttttttttatttcatcttcctttgg
ctttatttgagacttgatctctctagctgtcctggagctcactatttaga
ctagggctggcttgaaactcacagagatccacctgcctctgcctcccaag
tgctgggattaaagtcatacacagccattcctggcaactactcagttttt
tttaataaaaattaagatatattcaatgtatatgtttgtgcgtctgtgta
tatgtttacactctatgtgtagttgtgtctctggaggccagaagaagacc
cagaactggagttataggtagttgttggactacctaatatggatgctgga
aacacaacccaggtctttctcaatcagcaagtgtccatgtctctagcctc
tcaatttatttatttattttttattttacaatatatctcagtgttagaac
atttaacgagcatgcagatgaccctgggttcatctttacatccatctcga
gaaaaaaattttaattagttacattttagcatgggtaacataaa
caggacagacagagatacaaagaaacccatgtcttgaaaaactgtaaaaa
tctaggagagagagaaagagagagagaggggggggggggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_47704461_47705009
seq2: B6Ng01-079F08.b_45_594 (reverse)

seq1  TCTAAATAGTGAGCTCCAGGACAGCTAGAGAGATCAAGTCTCAAATAAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAATAGTGAGCTCCAGGACAGCTAGAGAGATCAAGTCTCAAATAAAG  50

seq1  CCAAAGGAAGATGAAATAAAAAAAAATTTTTTTTGAGAAGTTGTCCTAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGGAAGATGAAATAAAAAAAAATTTTTTTTGAGAAGTTGTCCTAGT  100

seq1  TAAGGTTTCTATTGCTGTGATGAAACACCATGACCGAAAGCAAGTTGGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGTTTCTATTGCTGTGATGAAACACCATGACCGAAAGCAAGTTGGGG  150

seq1  AGGAAAGGGTTTATTTGGCTTACACTTCCACAGGATAGTCTGACACTGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAGGGTTTATTTGGCTTACACTTCCACAGGATAGTCTGACACTGAA  200

seq1  GGAAGGCAGGATAGGAACTGGAGGGGAGGGGGGTCTGGAACGTGGAGATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGCAGGATAGGAACTGGAGGGGAGGGGGGTCTGGAACGTGGAGATA  250

seq1  AGAGCTGAGGCAGAGGCCATGGATGGGTGCCGCTCACTGGCTTGCTTGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTGAGGCAGAGGCCATGGATGGGTGCCGCTCACTGGCTTGCTTGCA  300

seq1  TGACTTACTCAGCCTGCATATAGAACCCAGGACCACCAGCCCAGGGATGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTACTCAGCCTGCATATAGAACCCAGGACCACCAGCCCAGGGATGG  350

seq1  CACCAGAATAATGGGCTAGGCCCTCGCCCATCAATCACTAATTAAGAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGAATAATGGGCTAGGCCCTCGCCCATCAATCACTAATTAAGAAAA  400

seq1  TGCCTTACAGCTGTATTTCAAGAAGGCATTTTCTCCATCGAGGCTCCCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTACAGCTGTATTTCAAGAAGGCATTTTCTCCATCGAGGCTCCCCT  450

seq1  TTTCCAGGCAACTTTAGCTTGTGTCAAACGACATACAACTACTCAGCCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAGGCAACTTTAGCTTGTGTCAAACGACATACAACTACTCAGCCCA  500

seq1  GTAGATGTATGTACTCTGTGGC-CATAGATCCTATTGGCTAGGAGAATTC  549
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GTAGATGTATGTACTCTGTGGCGCATAGATCCTATTGGCTAGGAGAATTC  550