BAC Information

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BAC

Clone NameB6Ng01-079G15
Chromosome18 (Build37)
Map Location 24,950,377 - 25,136,901
singlet/doubletdoublet
Overlap geneFhod3
Upstream geneMapre2, EG665813, LOC100040623, Zfp397, C230097I24Rik, Zfp35, Zfp191, D030070L09Rik, Galnt1, LOC665586, 2700062C07Rik, BC021395, Slc39a6, Epl2, Mocos
Downstream gene5730494M16Rik, AW554918, Brunol4, LOC100041241, LOC665916, LOC100041263
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-079G15.bB6Ng01-079G15.g
ACCDH894829DH894830
length1,1661,027
definitionDH894829|Mus musculus domesticus DNA, BAC clone: B6Ng01-079G15, 5' end.DH894830|Mus musculus domesticus DNA, BAC clone: B6Ng01-079G15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(25,135,705 - 25,136,901)(24,950,377 - 24,951,414)
sequence
gaattccactcatctttaaaaccccttacttaacattttgttcaaatgcc
acacactcaagttgaaacttttgaataagcagttcaaactaaggcctagg
ggtctccataattattaaatagttcaacaaaaaacttaggctccaaaatc
ttttccttctcgacctctaatagactgcttgcaacatgatatgggtaatt
atcagaaacaaagcacaggcccaaacatagtacctcaagttcagaattct
gggccctggcccacaagaattcatagggaatgaaaagatcagggttggca
catgagccaggacaggaagtcacctgcaccaagtccctgagctatggcct
tagagactgacagctgcctgcttctgacagtgcagtttgcagaaaggaag
ccaactctgtaacagtgaagcccagggggtagggtgggggactggaaagg
cctgaaggaacttatcagtagataaattttgtgaagtataaaacagagcc
agctgtccagaaatgaagattacaaacaaaatgaagaggtacaaatcttt
atgattaatttaggtgtttacctggagctttgtgtaagcagtagaaaata
tccactttgctaaattttccagatatttaacagcattaagaagagtcatt
tgaaggcctgagagatggctcaaatacccaacatgataacctgggattga
ccccctaggacccacatgatggaaggaaagaactgacatgtcctctgacc
tgcacacatgaacatgtgtgtggggcaaacatgtccacatactcacacac
attcatgcaaaataaataaaatgtaaaaaaaatgaaaagggtcaattaat
aaaaataacattaactcgctcctttaccaatgagaaagggattccaaagc
ctggcagacacgccagtcaaggggcatcttgttactgcttgcagaatggg
atactggaaatcacagcttgatgcttttacaggagcagcatgccagtttg
ggtacaaaccccacattctagaggctaaatactgttacctggccatctaa
tgagaccaaaggaactggtcacctggttcttgttcttaccagaaagagcc
ccccatctttccactgctcaaacacagcttgtggaaatatgaagatatat
attccagaataacttt
gaattcattttatagcaatggatgactttgaacctctgctccttccgctt
ccacattccaagtctggagaatatatctacactagtcttaggagtagcta
gggatcgaacctatgacatggtgcataccagacaaacactgttccaactg
acttatgttcccagcccctgacttgggttttgatttaaaaaggggtcaat
atattttttactcctgagacaatgaaagccaattctgtactttaattttt
tttgttcatataacttgatattttccagaataactcactttgagtatcta
ggggaattcacattgaaaacggatttgaatttgaaattaaactgtaatta
tattattttgaaataattcttttcaatataatggtctgaagacaaaatgg
ctcaaaggaccaagtcaagagagtgccacctgtctctggcctggccacct
gctgactggtgtcactggattctggagtcagtctgtatgggagaggcagc
tatgtgcacatgcatagacaatcacagggtgttccccgtgatgatacagt
gaattcctcaatcatttcctctcagatccatcaaatggtagtggattgat
gattcagaggctccataatctttgagtggatgcctgaaggcagccaacat
agtttgctgtagagtatttatgctggcacaggaagaaaggccaagaaagg
aaacctcagggtttcccaccagtatggtaggactaactataaatctttga
gagctggggttctggttaggcggctaacatcagggagcttgctgagttca
gttttgggcatgttgaatttagcatatggataaggcatgttgctgggtaa
gatgaaattggaggctcgtgagagagagatggacgatgagcgtggggatg
ctaaagatggggtgcatcgggcagatcctggcaggaagggacagacattc
tgaggggacagttgggaagatcagatgacagctagaactctgtacaatga
tattgcatgtttctaagggaaatgtcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_25135705_25136901
seq2: B6Ng01-079G15.b_48_1213 (reverse)

seq1  AAAGTTATTTTCCTTGGGAAATAT-TATCTGTCATATTTCCACAAAGCTT  49
      ||||||||| |      | ||||| ||||| |||||||||||| |||| |
seq2  AAAGTTATTCT------GGAATATATATCT-TCATATTTCCAC-AAGC-T  41

seq1  GTGTTTTGAGCCAGTTGGAAAGATGGGGGGCTCTTTCCTGGGTAAGGACA  99
      ||| |||||| ||| ||||||||||||||||||||||   |||||| |||
seq2  GTG-TTTGAG-CAG-TGGAAAGATGGGGGGCTCTTTC--TGGTAAGAACA  86

seq1  AGAACCAGGTTGACCAGTTTCCTTTGGTCTCATTTAGAAATTGGCCAGGT  149
      ||||||||| ||||||| |||||||||||||| |||||   |||||||||
seq2  AGAACCAGG-TGACCAG-TTCCTTTGGTCTCA-TTAGA---TGGCCAGGT  130

seq1  AACAAGTTATTTTAGCCTCCTAGAATGTGGGGTTTTGTACCCCAAACTGG  199
      ||| |||   |||||||| ||||||||||||| |||||| |||||||| |
seq2  AAC-AGT--ATTTAGCCT-CTAGAATGTGGGG-TTTGTA-CCCAAACT-G  173

seq1  GCATGCTGCTTCCTGTAAAAGCATCCAAGCTTGTTGATTTCCAGTATCCC  249
      ||||||||| |||||||||||||| ||||||   ||||||||||||||||
seq2  GCATGCTGC-TCCTGTAAAAGCAT-CAAGCT--GTGATTTCCAGTATCCC  219

seq1  ATTCTGCAAGCAGTAACAAGATGCCCCTTGACTGGCGTGTTCTGCCAGGC  299
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  ATTCTGCAAGCAGTAACAAGATGCCCCTTGACTGGCGTG-TCTGCCAGGC  268

seq1  TTTGGAATCCCTTTCTCATTGGTAAAGGAGCGAGTTAATGTTATTTTTAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAATCCCTTTCTCATTGGTAAAGGAGCGAGTTAATGTTATTTTTAT  318

seq1  TAATTGACCCTTTTCATTTTTTTTACATTTTATTTATTTTGCATGAATGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGACCCTTTTCATTTTTTTTACATTTTATTTATTTTGCATGAATGT  368

seq1  GTGTGAGTATGTGGACATGTTTGCCCCACACACATGTTCATGTGTGCAGG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGAGTATGTGGACATGTTTGCCCCACACACATGTTCATGTGTGCAGG  418

seq1  TCAGAGGACATGTCAGTTCTTTCCTTCCATCATGTGGGTCCTAGGGGGTC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGGACATGTCAGTTCTTTCCTTCCATCATGTGGGTCCTAGGGGGTC  468

seq1  AATCCCAGGTTATCATGTTGGGTATTTGAGCCATCTCTCAGGCCTTCAAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCCAGGTTATCATGTTGGGTATTTGAGCCATCTCTCAGGCCTTCAAA  518

seq1  TGACTCTTCTTAATGCTGTTAAATATCTGGAAAATTTAGCAAAGTGGATA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCTTCTTAATGCTGTTAAATATCTGGAAAATTTAGCAAAGTGGATA  568

seq1  TTTTCTACTGCTTACACAAAGCTCCAGGTAAACACCTAAATTAATCATAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTACTGCTTACACAAAGCTCCAGGTAAACACCTAAATTAATCATAA  618

seq1  AGATTTGTACCTCTTCATTTTGTTTGTAATCTTCATTTCTGGACAGCTGG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTGTACCTCTTCATTTTGTTTGTAATCTTCATTTCTGGACAGCTGG  668

seq1  CTCTGTTTTATACTTCACAAAATTTATCTACTGATAAGTTCCTTCAGGCC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTTTTATACTTCACAAAATTTATCTACTGATAAGTTCCTTCAGGCC  718

seq1  TTTCCAGTCCCCCACCCTACCCCCTGGGCTTCACTGTTACAGAGTTGGCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAGTCCCCCACCCTACCCCCTGGGCTTCACTGTTACAGAGTTGGCT  768

seq1  TCCTTTCTGCAAACTGCACTGTCAGAAGCAGGCAGCTGTCAGTCTCTAAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTCTGCAAACTGCACTGTCAGAAGCAGGCAGCTGTCAGTCTCTAAG  818

seq1  GCCATAGCTCAGGGACTTGGTGCAGGTGACTTCCTGTCCTGGCTCATGTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATAGCTCAGGGACTTGGTGCAGGTGACTTCCTGTCCTGGCTCATGTG  868

seq1  CCAACCCTGATCTTTTCATTCCCTATGAATTCTTGTGGGCCAGGGCCCAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACCCTGATCTTTTCATTCCCTATGAATTCTTGTGGGCCAGGGCCCAG  918

seq1  AATTCTGAACTTGAGGTACTATGTTTGGGCCTGTGCTTTGTTTCTGATAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTGAACTTGAGGTACTATGTTTGGGCCTGTGCTTTGTTTCTGATAA  968

seq1  TTACCCATATCATGTTGCAAGCAGTCTATTAGAGGTCGAGAAGGAAAAGA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCCATATCATGTTGCAAGCAGTCTATTAGAGGTCGAGAAGGAAAAGA  1018

seq1  TTTTGGAGCCTAAGTTTTTTGTTGAACTATTTAATAATTATGGAGACCCC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGAGCCTAAGTTTTTTGTTGAACTATTTAATAATTATGGAGACCCC  1068

seq1  TAGGCCTTAGTTTGAACTGCTTATTCAAAAGTTTCAACTTGAGTGTGTGG  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCCTTAGTTTGAACTGCTTATTCAAAAGTTTCAACTTGAGTGTGTGG  1118

seq1  CATTTGAACAAAATGTTAAGTAAGGGGTTTTAAAGATGAGTGGAATTC  1197
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGAACAAAATGTTAAGTAAGGGGTTTTAAAGATGAGTGGAATTC  1166

seq1: chr18_24950377_24951414
seq2: B6Ng01-079G15.g_69_1095

seq1  GAATTCATTTTATAGCAATGGATGACTTTGAACCTCTGCTCCTTCCGCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTTATAGCAATGGATGACTTTGAACCTCTGCTCCTTCCGCTT  50

seq1  CCACATTCCAAGTCTGGAGAATATATCTACACTAGTCTTAGGAGTAGCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATTCCAAGTCTGGAGAATATATCTACACTAGTCTTAGGAGTAGCTA  100

seq1  GGGATCGAACCTATGACATGGTGCATACCAGACAAACACTGTTCCAACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATCGAACCTATGACATGGTGCATACCAGACAAACACTGTTCCAACTG  150

seq1  ACTTATGTTCCCAGCCCCTGACTTGGGTTTTGATTTAAAAAGGGGTCAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATGTTCCCAGCCCCTGACTTGGGTTTTGATTTAAAAAGGGGTCAAT  200

seq1  ATATTTTTTACTCCTGAGACAATGAAAGCCAATTCTGTACTTTAATTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTTTACTCCTGAGACAATGAAAGCCAATTCTGTACTTTAATTTTT  250

seq1  TTTGTTCATATAACTTGATATTTTCCAGAATAACTCACTTTGAGTATCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTCATATAACTTGATATTTTCCAGAATAACTCACTTTGAGTATCTA  300

seq1  GGGGAATTCACATTGAAAACGGATTTGAATTTGAAATTAAACTGTAATTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAATTCACATTGAAAACGGATTTGAATTTGAAATTAAACTGTAATTA  350

seq1  TATTATTTTGAAATAATTCTTTTCAATATAATGGTCTGAAGACAAAATGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTTTGAAATAATTCTTTTCAATATAATGGTCTGAAGACAAAATGG  400

seq1  CTCAAAGGACCAAGTCAAGAGAGTGCCACCTGTCTCTGGCCTGGCCACCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAGGACCAAGTCAAGAGAGTGCCACCTGTCTCTGGCCTGGCCACCT  450

seq1  GCTGACTGGTGTCACTGGATTCTGGAGTCAGTCTGTATGGGAGAGGCAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGACTGGTGTCACTGGATTCTGGAGTCAGTCTGTATGGGAGAGGCAGC  500

seq1  TATGTGCACATGCATAGACAATCACAGGGTGTTCCCCGTGATGATACAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGCACATGCATAGACAATCACAGGGTGTTCCCCGTGATGATACAGT  550

seq1  GAATTCCTCAATCATTTCCTCTCAGATCCATCAAATGGTAGTGGATTGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCAATCATTTCCTCTCAGATCCATCAAATGGTAGTGGATTGAT  600

seq1  GATTCAGAGGCTCCATAATCTTTGAGTGGATGCCTGAAGGCAGCCAACAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCAGAGGCTCCATAATCTTTGAGTGGATGCCTGAAGGCAGCCAACAT  650

seq1  AGTTTGCTGTAGAGTATTTATGCTGGCACAGGAAGAAAGGCCAAGAAAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGCTGTAGAGTATTTATGCTGGCACAGGAAGAAAGGCCAAGAAAGG  700

seq1  AAACCTCAGGGTTTCCCACCAGTATGGTAGGACTAACTATAAATCTTTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTCAGGGTTTCCCACCAGTATGGTAGGACTAACTATAAATCTTTGA  750

seq1  GAGCTGGGGTTCTGGTTAGGCGGCTAACATCAGGGAGCTTGCTGAGTTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGGGGTTCTGGTTAGGCGGCTAACATCAGGGAGCTTGCTGAGTTCA  800

seq1  GTTTTGGGCATGTTGAATTTAGCATATGGATAAGGCATGTTGCTGGGTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGGGCATGTTGAATTTAGCATATGGATAAGGCATGTTGCTGGGTAA  850

seq1  GATGAAATTGGAGGCTCGTGAGAGGAGAGAATGGACGATGAGCGTGGGGA  900
      ||||||||||||||||||||||| ||||| ||||||||||||||||||||
seq2  GATGAAATTGGAGGCTCGTGAGA-GAGAG-ATGGACGATGAGCGTGGGGA  898

seq1  TGCTAAAGATGGGGGTGCATCGGGCAGATCCTGGCAGGGAAGGGACAGAA  950
      |||||||||| ||||||||||||||||||||||||| ||||||||||| |
seq2  TGCTAAAGAT-GGGGTGCATCGGGCAGATCCTGGCA-GGAAGGGACAG-A  945

seq1  CATTCTGAAGGGGGACAGTTGGGAAGATCAGAATGACAGCTAGAAACTCT  1000
      ||||||||  ||||||||||||||||||||| ||||||||||| ||||||
seq2  CATTCTGA--GGGGACAGTTGGGAAGATCAG-ATGACAGCTAG-AACTCT  991

seq1  GTACAAATGATA-TGCATGTTTCTAAAGGGAAAATGTCC  1038
      |||| ||||||| |||||||||||||  || ||||||||
seq2  GTAC-AATGATATTGCATGTTTCTAA--GGGAAATGTCC  1027