BAC Information

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BAC

Clone NameB6Ng01-080K16
Chromosome18 (Build37)
Map Location 82,977,927 - 82,978,225
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040871, B020010K11Rik, Galr1, Mbp, EG637748, Zfp236, LOC100039563
Downstream geneZfp516, LOC100041001, 4921531P14Rik, LOC665284
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-080K16.bB6Ng01-080K16.g
ACCDH895739DH895740
length1991,221
definitionDH895739|Mus musculus domesticus DNA, BAC clone: B6Ng01-080K16, 5' end.DH895740|Mus musculus domesticus DNA, BAC clone: B6Ng01-080K16, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcaggtcccaggataggttgaacaattctaataagtgatgtacc
tggctctttccaatacagtgttttgcattttaaaagatgtgtgtgtgtgt
atgtgtgtgtatgtgtgtgtatgtgtgtgtatgtgtgtgtatgtgtgtgt
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttct
gaattcagaactcttcagctggggaacaggagtaccagtgagtacagctt
tacaaggtaagtctggtcttgaactttctaaggaaagtcaagacagtcta
tcagaagtaaagtggaaaatagctttacaaggtatgtttggccttgaact
ttttctagtgttaggagcccttttgttccttttcacatgttatcaagtgg
ttaaggcagggctgaaaattctggatgaaattcaggacagtctatcagaa
gtaaagcggggagagagaataggagcaaagaggaaatatggttcacaaaa
taagtatacaggcctttccaagggtcttgaacccgaggaaaagttaaggt
caggtaagaatacctggggagagattggaaggaaggagaaggaaaaagaa
aagaaaaaagatcaattagagaagccagttcttagtagttctgaatcaga
tgaaaaggctattagggcctggaaggcgctctcccgagcaggtgaagcca
ctggacaattaacaaagatcgtccagggaccttaggagtccttctcagat
tttgtggccagtatgacagaggcaggctcttgcagcctacaaggtcttat
tgtccaccctggagttgtagatcaggattataaaggggaacttcaggttc
tctgttcttgtcctcaagttgtcttttctatatcacacggggacagaata
gctcaactaataattttgccaggcctacatggctgtttttccttcctctg
gtattcctcgagccgccagagggatcggttctactgaaaatgattctgat
tacttaataatgcctttagattgttgtcaaaatttatctactcctcatgt
aggggtaaaccctcgtggcgtcaggccattacaggtctggcaaatggatg
tcacgcatatttcctccttttggagaaatcaatatttacatgtttctatt
gacactgctctggtgtaatgtttgccacacctttacagagaaaaaagcct
cacatgtgatcacattgtcttggagcatggagtgcttggggggaaccgaa
cctctttagaactgataatggaaccagcttatgcatctcaaattcagcag
tctgccgttgatgacgtgaccactgaactgacttccatatacaccttagg
aatgtattgttgacggtgcaccgtcacgctcagcttatctttatacactg
acaaggacgaatatgagtgac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_82977927_82978225
seq2: B6Ng01-080K16.b_120_241 (reverse)

seq1  AGAACACACACACACACACGCACACACACACACACACACACACACACACA  50
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AGAACACACACACACACACACACACACACACACACACACACACACACACA  50

seq1  CATACACACACTCCCTACCTCTTCTGGCCTCCATGGTCACCAGACATGGA  100
      || ||||| ||                             || |||    
seq2  CACACACATAC----------------------------ACACACA----  68

seq1  TGTGGTACACATGCAGGTAACACACACACACATACACACACTTGCACATG  150
           ||||||        ||| |||||||||||||||||| | ||||  
seq2  -----TACACA-------CACATACACACACATACACACACATACACA--  104

seq1  TGCATACACATCATACCAAAAAAACACACACACACACCCTACCTCTTCTG  200
        || ||||||| |   |||                              
seq2  --CACACACATCTTTTAAAA------------------------------  122

seq1  GCCTCCATGGTCACCAGGTATGGATGTGGTACACAGACACACATGCAAGT  250
                                                        
seq2  --------------------------------------------------  122

seq1  AAAACACACACACACACACACACACACACACACACACATCCTTTTAAAA  299
                                                       
seq2  -------------------------------------------------  122