BAC Information

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BAC

Clone NameB6Ng01-084C01
Chromosome18 (Build37)
Map Location 26,498,629 - 26,675,152
singlet/doubletdoublet
Overlap genenone
Upstream geneBrunol4, LOC100041241, LOC665916, LOC100041263, LOC100041274
Downstream geneEG665977
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-084C01.bB6Ng01-084C01.g
ACCDH898187DH898188
length1,1821,106
definitionDH898187|Mus musculus domesticus DNA, BAC clone: B6Ng01-084C01, 5' end.DH898188|Mus musculus domesticus DNA, BAC clone: B6Ng01-084C01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(26,673,954 - 26,675,152)(26,498,629 - 26,499,740)
sequence
gaattcacacattcaaaagtgaaaagggggaatgtgcccaaggaaaacag
gctttggggaggacaaaggcggcctttcatcattttatcacaaaagccag
aatgtgattgcaggagggttactgtgtgtcatctctccatagcagcctgc
ccaccccttccttttttaaaaaataaaattcaagaaagaagcattgtcgt
ttagctgacagtcactgcctgtgctacatgggctctgtctcttccctaaa
gccacactgaggtgttgtatatcatgatatttgcagactaaagaaggtga
cattttcaagataaagacaggcagccctgtggtaggatcagctgtctgga
actgggttcagttagaaatgattattttccagttgtcccgtcatctgttt
ctcttcctaaaaggtttttcctttggggaaaagtctccagatgcacttta
aagtgctatctaccacacacatcccaaacctggcagggagcctgaaggga
ctgagagaggcttttctatggaacataacatccaagcattaaaagtgaaa
gcagatcctggcctctctgcatgctgcctggctggattcaaaaattcctt
tgagtctcctgtgcaaagacagcctctatggtcaagtcagaaccattcta
cagcctggggttccagactgagtaaaaaaggaaaaaggtataggtcacag
aaccccagcatccatctcagatttctgactgtgaatggatatcatcagct
acctacacttcttccacatctccctgtatcttcaggatagactataccct
caaactgagaagcaaaaaaatctcatccttttcaaagttgatattgtcaa
gtattttgtatagaatgtgtcaagtatagaaatcaaaaaagtagtcaaca
taactatcctgactgttgtctcttctggaacatgtatctatacatgcata
ttaatgtgtatatataccttaatgatatatggaaagtgcaaagatgaaaa
attatcctctaaaatgactattattattcataaattagatatgaggatag
aagatttttccaaagcatgatctagtagagctgagaaatcagagtacact
gtctcagaaatcttagcatgcatttttcaatgtgctagctcttaattcta
taaaataggaaatgcataggggctgaaagcaa
gaattctttcttagaatgaagtaaaaatcctttaaatgaagctgtggttt
taaaggtttggcctagctgcctgcatataaagtggattttttaaaacttt
ttatttttcagtcttaaaactgacattagctgagactaactcagttttgt
atctttactgacaaatccatattaataacagcatcaatactgcattaaac
ctgaactataggaataatttgtaatcatgccaaaattaataacattgtat
caccccagagtctctttggtagcagagtgaaatggttattaacttgggtt
atcatcacaacattatggacatttaaataggctataactctagaaattta
aaggtcagtttgatttattcaatttagttttgtcgtatgtttggaaaact
aattaaaatcccaaaagcatggctttggctataatattctggctagcaag
tgagaagcctgtgcttttgactcaccatcacgaactatttcctaggcatg
gtgacctctgtgtgttcatggaacagtgtgtttatagcaaggttcaagaa
ggcaggttcttagaaaatcccatttttctggataaatagctttctttatg
tgagtttgttcatcacaacaccatgcctttgttgactatgagattagttt
tagaaagaatacgaagtcattttatataaagatctacaatgattctgaac
ccccaaatgcccatgttcccatttttctcacattctttcccgctgaaaaa
agcatcccttttgttattaatcaaactacatattttggccaaatagctgt
aaagaagtccttaaattatttgggatgacaattttatgatcctcaaagca
gaaacttcagccatatgaatgtctacttgagtgtgacttcctgacacagg
aaggatccaataaagaagggaaaaggtagatggaatgatgcaggagtaga
tttctttattcataccatagaaaactggtaccctgtcactgtagatacag
tttctcagatttatattcactaaaatgaatcttgtaggtgctcttcttga
aaattcttctaatgcattggtatggacaatgtgtactatgccattagatg
gctccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_26673954_26675152
seq2: B6Ng01-084C01.b_44_1225 (reverse)

seq1  TTGCTTCAAGCCCCTATTGCATTCCCTATATTATTAGAATTGAGAGCTAG  50
      ||||||  |||||||| |||||| ||||| ||| ||||||| ||||||||
seq2  TTGCTTTCAGCCCCTA-TGCATTTCCTATTTTA-TAGAATTAAGAGCTAG  48

seq1  CACATTGAAAAATGCATGCTATAGA-TTCTGAGACAGTTGTACCTCTGGA  99
      ||||||||||||||||||||| ||| ||||||||||| |||| |||| ||
seq2  CACATTGAAAAATGCATGCTA-AGATTTCTGAGACAG-TGTA-CTCT-GA  94

seq1  TTTCTCAGCTCTTACTAGATCAATGCTTTTGGAAAAATCTTTCTAATCCT  149
      ||||||||||| ||||||||| |||| |||||||||||| |||| |||||
seq2  TTTCTCAGCTC-TACTAGATC-ATGC-TTTGGAAAAATC-TTCT-ATCCT  139

seq1  CATATCCTATGTTATGAATAATAATAAGTCATTTTTAGAGGATAATTTTT  199
      ||||| |||  |||||||||||||| ||||| ||||||||||||| ||||
seq2  CATAT-CTAATTTATGAATAATAAT-AGTCA-TTTTAGAGGATAA-TTTT  185

seq1  TCATCTTTGCACTTTTCCATATATTCATTAAGGTATATATACACATTTAA  249
      |||||||||||| |||||||||| ||||||||||||||||||||| ||||
seq2  TCATCTTTGCAC-TTTCCATATA-TCATTAAGGTATATATACACA-TTAA  232

seq1  TATGCATGTATAGATACATGTTCCAGAAGAGACAACAGTCAGGATAGTTA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCATGTATAGATACATGTTCCAGAAGAGACAACAGTCAGGATAGTTA  282

seq1  TGTTGACTACTTTTTTGATTTCTATACTTGACACATTCTATACAAAATAC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGACTACTTTTTTGATTTCTATACTTGACACATTCTATACAAAATAC  332

seq1  TTGACAATATCAACTTTGAAAAGGATGAGATTTTTTTGCTTCTCAGTTTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACAATATCAACTTTGAAAAGGATGAGATTTTTTTGCTTCTCAGTTTG  382

seq1  AGGGTATAGTCTATCCTGAAGATACAGGGAGATGTGGAAGAAGTGTAGGT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTATAGTCTATCCTGAAGATACAGGGAGATGTGGAAGAAGTGTAGGT  432

seq1  AGCTGATGATATCCATTCACAGTCAGAAATCTGAGATGGATGCTGGGGTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGATGATATCCATTCACAGTCAGAAATCTGAGATGGATGCTGGGGTT  482

seq1  CTGTGACCTATACCTTTTTCCTTTTTTACTCAGTCTGGAACCCCAGGCTG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGACCTATACCTTTTTCCTTTTTTACTCAGTCTGGAACCCCAGGCTG  532

seq1  TAGAATGGTTCTGACTTGACCATAGAGGCTGTCTTTGCACAGGAGACTCA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATGGTTCTGACTTGACCATAGAGGCTGTCTTTGCACAGGAGACTCA  582

seq1  AAGGAATTTTTGAATCCAGCCAGGCAGCATGCAGAGAGGCCAGGATCTGC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAATTTTTGAATCCAGCCAGGCAGCATGCAGAGAGGCCAGGATCTGC  632

seq1  TTTCACTTTTAATGCTTGGATGTTATGTTCCATAGAAAAGCCTCTCTCAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACTTTTAATGCTTGGATGTTATGTTCCATAGAAAAGCCTCTCTCAG  682

seq1  TCCCTTCAGGCTCCCTGCCAGGTTTGGGATGTGTGTGGTAGATAGCACTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTCAGGCTCCCTGCCAGGTTTGGGATGTGTGTGGTAGATAGCACTT  732

seq1  TAAAGTGCATCTGGAGACTTTTCCCCAAAGGAAAAACCTTTTAGGAAGAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTGCATCTGGAGACTTTTCCCCAAAGGAAAAACCTTTTAGGAAGAG  782

seq1  AAACAGATGACGGGACAACTGGAAAATAATCATTTCTAACTGAACCCAGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGATGACGGGACAACTGGAAAATAATCATTTCTAACTGAACCCAGT  832

seq1  TCCAGACAGCTGATCCTACCACAGGGCTGCCTGTCTTTATCTTGAAAATG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGACAGCTGATCCTACCACAGGGCTGCCTGTCTTTATCTTGAAAATG  882

seq1  TCACCTTCTTTAGTCTGCAAATATCATGATATACAACACCTCAGTGTGGC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTTCTTTAGTCTGCAAATATCATGATATACAACACCTCAGTGTGGC  932

seq1  TTTAGGGAAGAGACAGAGCCCATGTAGCACAGGCAGTGACTGTCAGCTAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGGAAGAGACAGAGCCCATGTAGCACAGGCAGTGACTGTCAGCTAA  982

seq1  ACGACAATGCTTCTTTCTTGAATTTTATTTTTTAAAAAAGGAAGGGGTGG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGACAATGCTTCTTTCTTGAATTTTATTTTTTAAAAAAGGAAGGGGTGG  1032

seq1  GCAGGCTGCTATGGAGAGATGACACACAGTAACCCTCCTGCAATCACATT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGCTGCTATGGAGAGATGACACACAGTAACCCTCCTGCAATCACATT  1082

seq1  CTGGCTTTTGTGATAAAATGATGAAAGGCCGCCTTTGTCCTCCCCAAAGC  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTTTTGTGATAAAATGATGAAAGGCCGCCTTTGTCCTCCCCAAAGC  1132

seq1  CTGTTTTCCTTGGGCACATTCCCCCTTTTCACTTTTGAATGTGTGAATTC  1199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTTCCTTGGGCACATTCCCCCTTTTCACTTTTGAATGTGTGAATTC  1182

seq1: chr18_26498629_26499740
seq2: B6Ng01-084C01.g_66_1171

seq1  GAATTCTTTCTTAGAATGAAGTAAAAATCCTTTAAATGAAGCTGTGGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTTAGAATGAAGTAAAAATCCTTTAAATGAAGCTGTGGTTT  50

seq1  TAAAGGTTTGGCCTAGCTGCCTGCATATAAAGTGGATTTTTTAAAACTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGTTTGGCCTAGCTGCCTGCATATAAAGTGGATTTTTTAAAACTTT  100

seq1  TTATTTTTCAGTCTTAAAACTGACATTAGCTGAGACTAACTCAGTTTTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTTCAGTCTTAAAACTGACATTAGCTGAGACTAACTCAGTTTTGT  150

seq1  ATCTTTACTGACAAATCCATATTAATAACAGCATCAATACTGCATTAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTACTGACAAATCCATATTAATAACAGCATCAATACTGCATTAAAC  200

seq1  CTGAACTATAGGAATAATTTGTAATCATGCCAAAATTAATAACATTGTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAACTATAGGAATAATTTGTAATCATGCCAAAATTAATAACATTGTAT  250

seq1  CACCCCAGAGTCTCTTTGGTAGCAGAGTGAAATGGTTATTAACTTGGGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCAGAGTCTCTTTGGTAGCAGAGTGAAATGGTTATTAACTTGGGTT  300

seq1  ATCATCACAACATTATGGACATTTAAATAGGCTATAACTCTAGAAATTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCACAACATTATGGACATTTAAATAGGCTATAACTCTAGAAATTTA  350

seq1  AAGGTCAGTTTGATTTATTCAATTTAGTTTTGTCGTATGTTTGGAAAACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCAGTTTGATTTATTCAATTTAGTTTTGTCGTATGTTTGGAAAACT  400

seq1  AATTAAAATCCCAAAAGCATGGCTTTGGCTATAATATTCTGGCTAGCAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAAATCCCAAAAGCATGGCTTTGGCTATAATATTCTGGCTAGCAAG  450

seq1  TGAGAAGCCTGTGCTTTTGACTCACCATCACGAACTATTTCCTAGGCATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAGCCTGTGCTTTTGACTCACCATCACGAACTATTTCCTAGGCATG  500

seq1  GTGACCTCTGTGTGTTCATGGAACAGTGTGTTTATAGCAAGGTTCAAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACCTCTGTGTGTTCATGGAACAGTGTGTTTATAGCAAGGTTCAAGAA  550

seq1  GGCAGGTTCTTAGAAAATCCCATTTTTCTGGATAAATAGCTTTCTTTATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGTTCTTAGAAAATCCCATTTTTCTGGATAAATAGCTTTCTTTATG  600

seq1  TGAGTTTGTTCATCACAACACCATGCCTTTGTTGACTATGAGATTAGTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTTGTTCATCACAACACCATGCCTTTGTTGACTATGAGATTAGTTT  650

seq1  TAGAAAGAATACGAAGTCATTTTATATAAAGATCTACAATGATTCTGAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAGAATACGAAGTCATTTTATATAAAGATCTACAATGATTCTGAAC  700

seq1  CCCCAAATGCCCATGTTCCCATTTTTCTCACATTCTTTCCCGCTGAAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAAATGCCCATGTTCCCATTTTTCTCACATTCTTTCCCGCTGAAAAA  750

seq1  AGCATCCCTTTTGTTATTAATCAAACTACATATTTTGGCCAAATAGCTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCCCTTTTGTTATTAATCAAACTACATATTTTGGCCAAATAGCTGT  800

seq1  AAAGAAGTCCTTAAATTATTT-GGATGACAATTTTATGATCCTCAAAGCA  849
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AAAGAAGTCCTTAAATTATTTGGGATGACAATTTTATGATCCTCAAAGCA  850

seq1  GAAACTTCAGCCATATGAATGTCTACTTGAGTGTGACTTCCTGACAACAG  899
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GAAACTTCAGCCATATGAATGTCTACTTGAGTGTGACTTCCTGAC-ACAG  899

seq1  GAAGGATCCAATAAAAGAAGGAAAAGGTAGAAGGAATGAAGGCAGGAGTA  949
      |||||||||||||||  | |||||||||||| |||||| | |||||||||
seq2  GAAGGATCCAATAAAGAAGGGAAAAGGTAGATGGAATG-ATGCAGGAGTA  948

seq1  GATTTCTTTATTCAATACCATAGAAAACTGGTAACCCTGTCACTGTAGAT  999
      ||||||||||||| |||||||||||||||||| |||||||||||||||||
seq2  GATTTCTTTATTC-ATACCATAGAAAACTGGT-ACCCTGTCACTGTAGAT  996

seq1  ACAGTTTCTCCAGAATTTATATTCACTAAAAATGAATC-TGTAGGTGCTC  1048
      ||||||||| ||| ||||||||||||| |||||||||| |||||||||||
seq2  ACAGTTTCT-CAG-ATTTATATTCACT-AAAATGAATCTTGTAGGTGCTC  1043

seq1  -TCTGAAAAATTCTTCTATTGCATTGGTTATGGACAATGTGTACTTATG-  1096
       |||  |||||||||||| |||||||| |||||||||||||||| |||| 
seq2  TTCTTGAAAATTCTTCTAATGCATTGG-TATGGACAATGTGTAC-TATGC  1091

seq1  CATTAGTATTGCTCCC  1112
      |||||| || ||||||
seq2  CATTAG-ATGGCTCCC  1106