BAC Information

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BAC

Clone NameB6Ng01-084M02
Chromosome18 (Build37)
Map Location 7,856,796 - 7,857,929
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039635, Mkx, LOC664778, Armc4, Mpp7, EG622384, LOC100039562, LOC100039606
Downstream geneWac, LOC665121, LOC225134, LOC665132, EG433158, EG545242
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-084M02.bB6Ng01-084M02.g
ACCDH898614DH898615
length1,1271,156
definitionDH898614|Mus musculus domesticus DNA, BAC clone: B6Ng01-084M02, 5' end.DH898615|Mus musculus domesticus DNA, BAC clone: B6Ng01-084M02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctttctgcctcccaaaggctgggattaagttttaaaatgtgca
ttactatattgggttggcttcagtttgtattttatagtccatctctgaag
caggcaagaacttgcgggaggaactaaagcaggagctgtgaaagggagct
acctactggcttgttcctcatggcttgctcagtctgctttattatacaac
cttcccagggaaggcattgcctaccatgggattggccttttcatgttaac
cataaatcagcaaagtgtcccacagacttgtctacaggcaatttatagag
atagtttctcaacagagcttccttcttcccagatgaccctagcttgtatc
aggtgaaaaaaaaataactatcacgaaagacaactttatcttccaattat
cataagtagtaagttcaaccttaaaaaatatgcatatttcatatgcaaag
cccataagccatgtaaagatgtctctacatataagctggttctttcattt
ctttctaaatcctataaatttatattttaagtttgcctagaaaagagcat
cttagaaatttcctcagcatttaataaaagcatatttttaacaatttaat
caatctttaagtacaaggtattagttatctctcttgtgaacctgtagtat
tttcttttgtagtttttccagaattaacatttgaaaatgccagatctaaa
tcattctatcaagaaactcaaactcaaccttgcaatacctataatttctg
actgaggtaaagtctttatgtaactcagattatacagttaattcttagtt
ttcttccttccttcctccccccccccctttcttttttattaaggtttggc
taaagggccaggataagttttttcccaagagacagttgcagagggaaagg
gacaatagaggcagatagctaacagcctattatatattaatgccatcatc
taaattcagaaattatgcatgcatgtgtgcatacacaccccctatatcag
catctgagtatagtgacattagtgtatcctatgctaaaaacagaaactgg
ggctggagagatgtgacagtattgctgctcttgcagagatcagctcagtg
gcagttatcccacttggtgctcagaac
gaattccttatcacttgaatatttttaacataaaggggtgttgtattttg
tcaaagccttttttagcatccaatgaaatgatcaagtgcttccccccaac
cccctttgagtttgtttatataatggattacattgatggatttttgaacc
atccctacattcctgggatgaagcctacttgatattggtgaatgatcatt
tgtatgtgttcttggatttggtttgagagaatttagtgagtatttttgca
tcgatattaataagggaaattgatctgaagttctctttttttctttggtg
tggttttggtattagcataactgtagattgatagaacgaattgggtagtg
ttccttctgtttctattttgtggactagtttgaagagtattggtattagg
tcttcttggagggtctgatagaattcggcactaaacccatgtggtcctgg
gctttatttgcttgggaagacttttaattactacttctaattctttagag
gatagggaactgtttagatggtttatctgatcctgatctaactttgatgc
ctgatatctgtctaaataattatctatttctttcacattttccttttttt
tttttttttttttgagtataggtttctgtactaggatctaatgatttttt
tttttaatttcctcagtttctgttgttatgtctccctttttggtaccttt
cttaatatttaagaggcagaattaagaaataaattatgtgtgaccttttg
tatctgaaatagcatcgtctgagttcaaaatggttttgttttgttttgtt
tttgtattttactttgggtcttttgaaatattctccaagaatttttttta
ttcttttgacacttttcttatgtacatgtgctttgatcatactcaccctg
aaatatcactccattctctcacaactctaccatttcccttccactgatat
gagtgctgtatcatttttaattatgatatgatatttcactggtgcctcat
gccagattggcacatctctggaccagaaactgtcagtagccattgccaga
tgtttcttcttcagagtccactgctaagtcgttagctagtaggttcagct
tcagtcactgagtgaccttgatcggtccatcgactcgaatcaatggtcgc
ctaggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_7856796_7857929
seq2: B6Ng01-084M02.b_45_1171

seq1  GAATTCTCTTTCTGCCTCCCAAAGGCTGGGATTAAGTTTTAAAATGTGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTTCTGCCTCCCAAAGGCTGGGATTAAGTTTTAAAATGTGCA  50

seq1  TTACTATATTGGGTTGGCTTCAGTTTGTATTTTATAGTCCATCTCTGAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTATATTGGGTTGGCTTCAGTTTGTATTTTATAGTCCATCTCTGAAG  100

seq1  CAGGCAAGAACTTGCGGGAGGAACTAAAGCAGGAGCTGTGAAAGGGAGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCAAGAACTTGCGGGAGGAACTAAAGCAGGAGCTGTGAAAGGGAGCT  150

seq1  ACCTACTGGCTTGTTCCTCATGGCTTGCTCAGTCTGCTTTATTATACAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTACTGGCTTGTTCCTCATGGCTTGCTCAGTCTGCTTTATTATACAAC  200

seq1  CTTCCCAGGGAAGGCATTGCCTACCATGGGATTGGCCTTTTCATGTTAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCAGGGAAGGCATTGCCTACCATGGGATTGGCCTTTTCATGTTAAC  250

seq1  CATAAATCAGCAAAGTGTCCCACAGACTTGTCTACAGGCAATTTATAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAATCAGCAAAGTGTCCCACAGACTTGTCTACAGGCAATTTATAGAG  300

seq1  ATAGTTTCTCAACAGAGCTTCCTTCTTCCCAGATGACCCTAGCTTGTATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTTCTCAACAGAGCTTCCTTCTTCCCAGATGACCCTAGCTTGTATC  350

seq1  AGGTGAAAAAAAAATAACTATCACGAAAGACAACTTTATCTTCCAATTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGAAAAAAAAATAACTATCACGAAAGACAACTTTATCTTCCAATTAT  400

seq1  CATAAGTAGTAAGTTCAACCTTAAAAAATATGCATATTTCATATGCAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGTAGTAAGTTCAACCTTAAAAAATATGCATATTTCATATGCAAAG  450

seq1  CCCATAAGCCATGTAAAGATGTCTCTACATATAAGCTGGTTCTTTCATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATAAGCCATGTAAAGATGTCTCTACATATAAGCTGGTTCTTTCATTT  500

seq1  CTTTCTAAATCCTATAAATTTATATTTTAAGTTTGCCTAGAAAAGAGCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTAAATCCTATAAATTTATATTTTAAGTTTGCCTAGAAAAGAGCAT  550

seq1  CTTAGAAATTTCCTCAGCATTTAATAAAAGCATATTTTTAACAATTTAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGAAATTTCCTCAGCATTTAATAAAAGCATATTTTTAACAATTTAAT  600

seq1  CAATCTTTAAGTACAAGGTATTAGTTATCTCTCTTGTGAACCTGTAGTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTTTAAGTACAAGGTATTAGTTATCTCTCTTGTGAACCTGTAGTAT  650

seq1  TTTCTTTTGTAGTTTTTCCAGAATTAACATTTGAAAATGCCAGATCTAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTGTAGTTTTTCCAGAATTAACATTTGAAAATGCCAGATCTAAA  700

seq1  TCATTCTATCAAGAAACTCAAACTCAACCTTGCAATACCTATAATTTCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCTATCAAGAAACTCAAACTCAACCTTGCAATACCTATAATTTCTG  750

seq1  ACTGAGGTAAAGTCTTTATGTAACTCAGATTATACAGTTAATTCTTAGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGGTAAAGTCTTTATGTAACTCAGATTATACAGTTAATTCTTAGTT  800

seq1  TTCTTCCTTCCTTCCTCCCCCCCCCCCTTTCTTTTTTATTAAGGTTTGGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCCTTCCTTCCTCCCCCCCCCCCTTTCTTTTTTATTAAGGTTTGGC  850

seq1  TAAA-GGCCAGGATAAGTTTTTTCCCAAGAGACAGTTGCAGAGGGAAAGG  899
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGGCCAGGATAAGTTTTTTCCCAAGAGACAGTTGCAGAGGGAAAGG  900

seq1  GACAATAGAGGCAGATAGCTAACAGCCTA-TATATATTAATGCCATCATT  948
      ||||||||||||||||||||||||||||| |||||||||||||||||| |
seq2  GACAATAGAGGCAGATAGCTAACAGCCTATTATATATTAATGCCATCA-T  949

seq1  CTAAATTCAGAAATTATGCATGCATGTGTGCATACACACCCCCTTATATC  998
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CTAAATTCAGAAATTATGCATGCATGTGTGCATACACACCCCC-TATATC  998

seq1  AGGCATCTTGAGTATAGTGACATTAGTGTATCCTATGCTAAAAACAGAAA  1048
      | ||||| ||||||||||||||||||||||||||||||||||||||| ||
seq2  A-GCATC-TGAGTATAGTGACATTAGTGTATCCTATGCTAAAAACAG-AA  1045

seq1  ACTGGGGCTGGAGAGATGGTTGACAGTATTTGCTGCTCTTGCAGGAGATC  1098
      ||||||||||||||||||  |||||||| |||||||||||||| ||||| 
seq2  ACTGGGGCTGGAGAGATG--TGACAGTA-TTGCTGCTCTTGCA-GAGAT-  1090

seq1  CAGCTCAGTTGCCAGTA-CCCACTTGGTGCTCAGAAC  1134
      ||||||||| ||   || |||||||||||||||||||
seq2  CAGCTCAGTGGCAGTTATCCCACTTGGTGCTCAGAAC  1127