BAC Information

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BAC

Clone NameB6Ng01-088F22
Chromosome18 (Build37)
Map Location 50,723,777 - 50,724,756
singlet/doubletsinglet
Overlap genenone
Upstream geneDtwd2, Dmxl1, Tnfaip8, Hsd17b4, LOC626721, LOC667233, Gm93
Downstream geneHdhd1a, LOC100042373, LOC100042385, Prr16
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-088F22.bB6Ng01-088F22.g
ACCDH901239DH901240
length1,0211,147
definitionDH901239|Mus musculus domesticus DNA, BAC clone: B6Ng01-088F22, 5' end.DH901240|Mus musculus domesticus DNA, BAC clone: B6Ng01-088F22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaaaggtgaagctgatctacataaggataaagggaaaaagattg
tcaagtcatttatgccaagcatccagtcttattaaacagctacaaaaaat
tctacttaataatcataacataagggactagagagatgtctcagcactta
agagtgcatccagttttttgcaacggacctttgtttggctcctggcattg
acatctgtcagtttacagctgcatgaaacttcagctccagggaatctgat
acttctcttctgattgtgtcagcatttgcactcgagtgagcgcttgaaca
ctcgtgcatgtgcgtgcacacgcacacacacacacacatacacacacata
cacacacatacacacacacacacacgcacacactcacacacacaatttaa
acataaaacatatcagtttgggtagggaaactcatgtctttagcctttat
actcaggaggagtattaagagatccaattggttctccctacctattcaac
attgtactcgaagtcctagccagagcaattagacaacaaaaggagtcaag
gagatacaaattggaaaggaagaagtcaaagtattactatttacagatga
tatgatagtatatataagtgaccctaaaaattccaccagagaactcctaa
acctgataaacagcttcagtgcagtagctggatataaaattaactcaaac
aaatcagtgacctttttctacacaaaggataaacaggctgagaaagaaat
tagggaaacaacacctttcacaatagtcacaaatactataaaattccttg
gtgtgactctaaggaagtgaaagatctgtatgataagaacttcaagtctc
taaagaaagaaatcaaagaagatctcagaagatggaaagatctcccatgc
tcatggattgggagatcaatatagtaaaaatggctatcttgctgaaagca
atctacagattcaatgcaatccccatcaaaattccaactcaattcttcac
agagttagaaagggcaatttg
gaattcctgatctttccaagatttttatcatgaatgggtgttggatttta
tcaaatgctttctccacatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacactgatggattttcgtatattaaacc
atccctgcatccctgggatggaacctacttggtcaggatggatgactgtt
ttgatgtgttcttggattcggttagcaagaattttattgagtatttttgc
atagatattcataagggaaattggtctgaagttttctatctttgttggat
ctttctgtggtttaggtatcagaataattgtggcttgatagaatgagttg
ggttgaggaccttctacttctattttgtggaatagtttgtgcagaactgg
gattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggttgggagactattaatgactgcttctatttct
ttaggggatataggactgtttagatcattaacctgatcctaagttaactt
tggtacctggtaactgtctagaaatttgtccatttcatccaggttctcca
gttttgttgagtatagccttttgtagacggatctgatggtggtttggatt
tcttcgggatctgctgtatgtctccctttttcatttctgattttgttatt
aggatgctttccctgtgcacttttagtgagtcttgctaaatgttttgcta
aatgtttatctaactttgttgattttctcaaagaaccagctcctggtttg
ggttgattctttgaatagtcttatttccccttggttgattttgaccctga
gtttgattattcctgcattctactcctctttggtgaattgctttcttttg
ttctagagcttttagtgtgtgtcaagctgctactgtctgctctctctagt
ttcttttttggaggcactcagagctatgagtttcctctagaaatgatttc
atgtgtccatagcttcggtatgttgtgcttcattttcgtaaactctaaag
tcttaatttcttcttattcttcttgaccagatcatggaagggttgtcgat
tccaggaagtggctcatatattaggtgtatcgaatcgccaatgccaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_50723777_50724756
seq2: B6Ng01-088F22.b_48_1026

seq1  GAATTCCAAAGGTGAAGCTGATCTACATAAGGATAAAGGGAAAAAGATTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAAGGTGAAGCTGATCTACATAAGGATAAAGGGAAAAAGATTG  50

seq1  TCAAGTCATTTATGCCAAGCATCCAGTCTTATTAAACAGCTACAAAAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTCATTTATGCCAAGCATCCAGTCTTATTAAACAGCTACAAAAAAT  100

seq1  TCTACTTAATAATCATAACATAAGGGACTAGAGAGATGTCTCAGCACTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTTAATAATCATAACATAAGGGACTAGAGAGATGTCTCAGCACTTA  150

seq1  AGAGTGCATCCAGTTTTTTGCAACGGACCTTTGTTTGGCTCCTGGCATTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGCATCCAGTTTTTTGCAACGGACCTTTGTTTGGCTCCTGGCATTG  200

seq1  ACATCTGTCAGTTTACAGCTGCATGAAACTTCAGCTCCAGGGAATCTGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTGTCAGTTTACAGCTGCATGAAACTTCAGCTCCAGGGAATCTGAT  250

seq1  ACTTCTCTTCTGATTGTGTCAGCATTTGCACTCGAGTGAGCGCTTGAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTCTTCTGATTGTGTCAGCATTTGCACTCGAGTGAGCGCTTGAACA  300

seq1  CTCGTGCATGTGCGTGCACACGCACACACACACACACATACACACACATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGTGCATGTGCGTGCACACGCACACACACACACACATACACACACATA  350

seq1  CACACACATACACACACACACACACGCACACACTCACACACACAATTTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACATACACACACACACACACGCACACACTCACACACACAATTTAA  400

seq1  ACATAAAACATATCAGTTTGGGTAGGGAAACTCATGTCTTTAGCCTTTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAAACATATCAGTTTGGGTAGGGAAACTCATGTCTTTAGCCTTTAT  450

seq1  ACTCAGGAGGAGTATTAAGAGATCCAATTGGTTCTCCCTACCTATTCAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGGAGGAGTATTAAGAGATCCAATTGGTTCTCCCTACCTATTCAAC  500

seq1  ATTGTACTCGAAGTCCTAGCCAGAGCAATTAGACAACAAAAGGAGTCAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTACTCGAAGTCCTAGCCAGAGCAATTAGACAACAAAAGGAGTCAAG  550

seq1  GAGATACAAATTGGAAAGGAAGAAGTCAAAGTATTACTATTTACAGATGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATACAAATTGGAAAGGAAGAAGTCAAAGTATTACTATTTACAGATGA  600

seq1  TATGATAGTATATATAAGTGACCCTAAAAATTCCACCAGAGAACTCCTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATAGTATATATAAGTGACCCTAAAAATTCCACCAGAGAACTCCTAA  650

seq1  ACCTGATAAACAGCTTCAGTGCAGTAGCTGGATATAAAATTAACTCAAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGATAAACAGCTTCAGTGCAGTAGCTGGATATAAAATTAACTCAAAC  700

seq1  AAATCAGTGACCTTTTTCTACACAAAGGATAAACAGGCTGAGAAAGAAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAGTGACCTTTTTCTACACAAAGGATAAACAGGCTGAGAAAGAAAT  750

seq1  TAGGGAAACAACACCTTTCACAATAGTCACAAATACTATAAAATTCCTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGAAACAACACCTTTCACAATAGTCACAAATACTATAAAATTCCTTG  800

seq1  GTGTGACTCTAAGGAAGTGAAAGATCTGTATGATAAGAACTTCAAGTCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGACTCTAAGGAAGTGAAAGATCTGTATGATAAGAACTTCAAGTCTC  850

seq1  TAAAGAAAGAAATCAAAGAAGATCTCAGAAGATGGAAAGATCTCCCATGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAAAGAAATCAAAGAAGATCTCAGAAGATGGAAAGATCTCCCATGC  900

seq1  TCATGGATTGGGAGGATCAATATAGTAAAAATGGCTATCTTGCTGAAAGC  950
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TCATGGATTGGGA-GATCAATATAGTAAAAATGGCTATCTTGCTGAAAGC  949

seq1  AATCTACAGATTCAATGCAATCCCCATCAA  980
      ||||||||||||||||||||||||||||||
seq2  AATCTACAGATTCAATGCAATCCCCATCAA  979