BAC Information

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BAC

Clone NameB6Ng01-093G14
Chromosome18 (Build37)
Map Location 85,778,141 - 85,898,945
singlet/doubletdoublet
Overlap geneLOC665382
Upstream geneCndp1, EG640234, Cndp2, LOC100039711, LOC100039725, B230399E16Rik, Cyb5, Fbxo15, 1700034H14Rik, LOC100039765
Downstream geneLOC545269, LOC545270, LOC665402, Neto1, Cbln2
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-093G14.bB6Ng01-093G14.g
ACCDH904911DH904912
length9791,159
definitionDH904911|Mus musculus domesticus DNA, BAC clone: B6Ng01-093G14, 5' end.DH904912|Mus musculus domesticus DNA, BAC clone: B6Ng01-093G14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(85,778,141 - 85,779,066)(85,897,773 - 85,898,945)
sequence
gaattcattctttttaatagctgagtagtactccattgtgtaaatgtacc
acattttctgtatccattcctctgttgagttctacagattcaatgcaatc
cccatcaaaattccaactcaattcttcaacgaattagaaagggaaaaact
gaatggcttcatgatggtggacatatctgtttgtacagttgtacaaaggt
gtagagtaatgtagagcatggtcttccactgactacaatatgttgtatgc
cctactatgatatgtaaatactggagtagtaagaaattcattgtgccaac
aggaagtagaaactgtccaagcggagtgtgcaagacaaatcaatgtttcc
aactctcactgttgctgaaaattcactctgaaaagcaacactagtctaaa
atcattaccttaaaaataaataagtaaaattagtgtgtccagttttatgt
ggaagtcttcaattcacttggacttgagatttgtgcaaggtgataaatat
ggatctatttggattcttctgtatgcagacatccagttataccagcacca
tttgatgtagatgctttttttcccccccgcaccattattttccatggttt
gcacttctttgtcaaaatcaagtgtccatagatgtgtggctttaaatctg
ggacttttattagaatacattaatcaaccttctttttctttcttttcttt
tctttttttctttctttcttttttttttttttttttgccaataccatgtg
gttttgttactattgctctgtattacagcttgaaataagggatggcaaaa
cgtccagaagttcttttactgcagaggattgttttagataccctaggctt
ttttgtttttccatattaagttgagaatcgtcttttgaggcctataaaga
actgtttgggatttttatgggaattgcagtgatctgtaaattgctttggt
aagatggccatttgcatatgctagtccta
gaattcctatcctgacttttctataggattaactgtgacctgaagttagc
caattaaccgtttccctcccaagctgtcatttgtgcagagcactttgtca
cagcaatggaaaggaatggaggacattattcactctgcaagtaccatctt
ttctatcttctccaggtgctttcctctcactgaaggcagacacctcacag
tcttgtcagaacctttccttcttagaattcttctcaaattcatcccactt
ctgcttgccttcgctcagggacagctgttttctgggccagcactctccat
ggggggctattgccttctcacttccagagtggtaactctgaattcttccc
ttctttacttctcctaattatttcatccattgttgtttgagaaacacctt
tgctggcctcaggagtgtgtctccaacttactattaaattaaaatttcgc
atattggctatatcagaatcagccccttgataggagttttgaatttactt
gaacaaagcatatagaggaaaatttaatttagcattgacagctatatctt
gggacacaggaaatcttctatgtaatcatcaatataaaatgtcactttcc
tgaacattgacataaattggcttacaaactggagcttttttttttctcta
aaactctgtggttgctaatggcatttaacttctttattcagcttttaagt
atctgctggtatctgacttttcatgtttagttttttaaccttgagaatct
aaacaccttggttaggcatttctaattttagaaatcagtttgtattgccc
tacatgatcacagcaaattcttataatggttggtttccttttcttttgtt
aatgcctttgtgacaaatgagaaaaaatatagtggagtaaaaataactta
aaatgagatatatgctgagatgtaaatgtcctaaaggaatcagatgcttg
tgttgattgatacttcagaactttctcactgaaaatgtgttgaaatgtca
tttaaacccaatggatataatttagcacaatctctaatgtctgtactggg
aatatagagactctctgacttcattattagacagacatccaggtcggaaa
gtagcataggtaaagtaacctccagttattttacttctcattgaataacg
attggatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_85778141_85779066
seq2: B6Ng01-093G14.b_43_967

seq1  GAATTCATTCTTTTTAATAGCTGAGTAGTACTCCATTGTGTAAATGTACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTCTTTTTAATAGCTGAGTAGTACTCCATTGTGTAAATGTACC  50

seq1  ACATTTTCTGTATCCATTCCTCTGTTGAGTTCTACAGATTCAATGCAATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTCTGTATCCATTCCTCTGTTGAGTTCTACAGATTCAATGCAATC  100

seq1  CCCATCAAAATTCCAACTCAATTCTTCAACGAATTAGAAAGGGAAAAACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCAAAATTCCAACTCAATTCTTCAACGAATTAGAAAGGGAAAAACT  150

seq1  GAATGGCTTCATGATGGTGGACATATCTGTTTGTACAGTTGTACAAAGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGCTTCATGATGGTGGACATATCTGTTTGTACAGTTGTACAAAGGT  200

seq1  GTAGAGTAATGTAGAGCATGGTCTTCCACTGACTACAATATGTTGTATGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAGTAATGTAGAGCATGGTCTTCCACTGACTACAATATGTTGTATGC  250

seq1  CCTACTATGATATGTAAATACTGGAGTAGTAAGAAATTCATTGTGCCAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACTATGATATGTAAATACTGGAGTAGTAAGAAATTCATTGTGCCAAC  300

seq1  AGGAAGTAGAAACTGTCCAAGCGGAGTGTGCAAGACAAATCAATGTTTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGTAGAAACTGTCCAAGCGGAGTGTGCAAGACAAATCAATGTTTCC  350

seq1  AACTCTCACTGTTGCTGAAAATTCACTCTGAAAAGCAACACTAGTCTAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTCACTGTTGCTGAAAATTCACTCTGAAAAGCAACACTAGTCTAAA  400

seq1  ATCATTACCTTAAAAATAAATAAGTAAAATTAGTGTGTCCAGTTTTATGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTACCTTAAAAATAAATAAGTAAAATTAGTGTGTCCAGTTTTATGT  450

seq1  GGAAGTCTTCAATTCACTTGGACTTGAGATTTGTGCAAGGTGATAAATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTCTTCAATTCACTTGGACTTGAGATTTGTGCAAGGTGATAAATAT  500

seq1  GGATCTATTTGGATTCTTCTGTATGCAGACATCCAGTTATACCAGCACCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTATTTGGATTCTTCTGTATGCAGACATCCAGTTATACCAGCACCA  550

seq1  TTTGATGTAGATGCTTTTTTTCCCCCCCGCACCATTATTTTCCATGGTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATGTAGATGCTTTTTTTCCCCCCCGCACCATTATTTTCCATGGTTT  600

seq1  GCACTTCTTTGTCAAAATCAAGTGTCCATAGATGTGTGGCTTTAAATCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTTCTTTGTCAAAATCAAGTGTCCATAGATGTGTGGCTTTAAATCTG  650

seq1  GGACTTTTATTAGAATACATTAATCAACCTTCTTTTTCTTTCTTTTCTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTTTATTAGAATACATTAATCAACCTTCTTTTTCTTTCTTTTCTTT  700

seq1  TCTTTTTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTGCCAATACCATGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTGCCAATACCATGTG  750

seq1  GTTTTGTTACTATTGCTCTGTATTACAGCTTGAAATAAGGGATGGCAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTTACTATTGCTCTGTATTACAGCTTGAAATAAGGGATGGCAAAA  800

seq1  CGTCCAGAAGTTCTTTTACTGCAGAGGATTGTTTTAGATACCCTAGGC-T  849
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CGTCCAGAAGTTCTTTTACTGCAGAGGATTGTTTTAGATACCCTAGGCTT  850

seq1  TTTTGTTTTTCCATATTAAGTTGAGAATCGTTCTTTTGAGGCCTATAAAG  899
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TTTTGTTTTTCCATATTAAGTTGAGAATCG-TCTTTTGAGGCCTATAAAG  899

seq1  AACTGTTTTGGGATTTTTATGGGAATT  926
      ||||| |||||||||||||||||||||
seq2  AACTG-TTTGGGATTTTTATGGGAATT  925

seq1: chr18_85897773_85898945
seq2: B6Ng01-093G14.g_68_1226 (reverse)

seq1  ATATCCAATCGTTATTTAAATTGAAGATGATAAAAATAACTGAGGATAAC  50
      |||||||||||||||| ||   ||||      ||||||||||  | | ||
seq2  ATATCCAATCGTTATTCAATGAGAAG-----TAAAATAACTGGAGGTTAC  45

seq1  TATTTAACTAATGCTACTTTCAGACTTGGATGTCTG-CTAATGATGAAGT  99
        |||| || ||||||||||| ||| |||||||||| ||||| |||||||
seq2  --TTTACCT-ATGCTACTTTCCGACCTGGATGTCTGTCTAATAATGAAGT  92

seq1  CAGAGAGTCT-TATA-TCCCAGTACAGACATTTAGAGA-TGTGCCTAAAT  146
      |||||||||| |||| |||||||||||||| ||||||| |||| ||||| 
seq2  CAGAGAGTCTCTATATTCCCAGTACAGACA-TTAGAGATTGTG-CTAAA-  139

seq1  TTATATCCATTGTGTTTAAATGACATTTCAACACATTTTTCAGTGAGAAA  196
      |||||||||||| |||||||||||||||||||||| ||||||||||||||
seq2  TTATATCCATTGGGTTTAAATGACATTTCAACACA-TTTTCAGTGAGAAA  188

seq1  GTTCTGAAGTATCAATCAACACAAGCATCTGATTCCCTTTTAGGACATTT  246
      ||||||||||||||||||||||||||||||||||||  ||||||||| ||
seq2  GTTCTGAAGTATCAATCAACACAAGCATCTGATTCC--TTTAGGACA-TT  235

seq1  TACATCTCAGCATATTATCTTCATTTTAAGTTATTTTTTACTCCACTATA  296
      |||||||||||||| |||| ||||||||||||| ||||||||||||||||
seq2  TACATCTCAGCATA-TATC-TCATTTTAAGTTA-TTTTTACTCCACTATA  282

seq1  TTTTTTCTCATTTTGTCACAAAGGCATTAACAAAAGAAAAGGAAACCAAC  346
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCTCA-TTTGTCACAAAGGCATTAACAAAAGAAAAGGAAACCAAC  331

seq1  CATTATAAGAATTTGCTGTGATCATGTAGGGCAATACAAACTGATTTCTA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATAAGAATTTGCTGTGATCATGTAGGGCAATACAAACTGATTTCTA  381

seq1  AAATTAGAAATGCCTAACCAAGGTGTTTAGATTCTCAAGGTTAAAAAACT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAGAAATGCCTAACCAAGGTGTTTAGATTCTCAAGGTTAAAAAACT  431

seq1  AAACATGAAAAGTCAGATACCAGCAGATACTTAAAAGCTGAATAAAGAAG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATGAAAAGTCAGATACCAGCAGATACTTAAAAGCTGAATAAAGAAG  481

seq1  TTAAATGCCATTAGCAACCACAGAGTTTTAGAG-AAAAAAAAAGCTCCAG  545
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TTAAATGCCATTAGCAACCACAGAGTTTTAGAGAAAAAAAAAAGCTCCAG  531

seq1  TTTGTAAGCCAATTTATGTCAATGTTCAGGAAAGTGACATTTTATATTGA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAAGCCAATTTATGTCAATGTTCAGGAAAGTGACATTTTATATTGA  581

seq1  TGATTACATAGAAGATTTCCTGTGTCCCAAGATATAGCTGTCAATGCTAA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTACATAGAAGATTTCCTGTGTCCCAAGATATAGCTGTCAATGCTAA  631

seq1  ATTAAATTTTCCTCTATATGCTTTGTTCAAGTAAATTCAAAACTCCTATC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAATTTTCCTCTATATGCTTTGTTCAAGTAAATTCAAAACTCCTATC  681

seq1  AAGGGGCTGATTCTGATATAGCCAATATGCGAAATTTTAATTTAATAGTA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGGCTGATTCTGATATAGCCAATATGCGAAATTTTAATTTAATAGTA  731

seq1  AGTTGGAGACACACTCCTGAGGCCAGCAAAGGTGTTTCTCAAACAACAAT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGGAGACACACTCCTGAGGCCAGCAAAGGTGTTTCTCAAACAACAAT  781

seq1  GGATGAAATAATTAGGAGAAGTAAAGAAGGGAAGAATTCAGAGTTACCAC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGAAATAATTAGGAGAAGTAAAGAAGGGAAGAATTCAGAGTTACCAC  831

seq1  TCTGGAAGTGAGAAGGCAATAGCCCCCCATGGAGAGTGCTGGCCCAGAAA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAAGTGAGAAGGCAATAGCCCCCCATGGAGAGTGCTGGCCCAGAAA  881

seq1  ACAGCTGTCCCTGAGCGAAGGCAAGCAGAAGTGGGATGAATTTGAGAAGA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTGTCCCTGAGCGAAGGCAAGCAGAAGTGGGATGAATTTGAGAAGA  931

seq1  ATTCTAAGAAGGAAAGGTTCTGACAAGACTGTGAGGTGTCTGCCTTCAGT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTAAGAAGGAAAGGTTCTGACAAGACTGTGAGGTGTCTGCCTTCAGT  981

seq1  GAGAGGAAAGCACCTGGAGAAGATAGAAAAGATGGTACTTGCAGAGTGAA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGAAAGCACCTGGAGAAGATAGAAAAGATGGTACTTGCAGAGTGAA  1031

seq1  TAATGTCCTCCATTCCTTTCCATTGCTGTGACAAAGTGCTCTGCACAAAT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTCCTCCATTCCTTTCCATTGCTGTGACAAAGTGCTCTGCACAAAT  1081

seq1  GACAGCTTGGGAGGGAAACGGTTAATTGGCTAACTTCAGGTCACAGTTAA  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGCTTGGGAGGGAAACGGTTAATTGGCTAACTTCAGGTCACAGTTAA  1131

seq1  TCCTATAGAAAAGTCAGGATAGGAATTC  1173
      ||||||||||||||||||||||||||||
seq2  TCCTATAGAAAAGTCAGGATAGGAATTC  1159