BAC Information

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BAC

Clone NameB6Ng01-093J17
Chromosome18 (Build37)
Map Location 21,860,683 - 22,032,303
singlet/doubletdoublet
Overlap gene4921528I01Rik
Upstream geneB4galt6, D030074E01Rik, Rnf125, Rnf138, Mep1b, EG622978, Gm944, LOC665722, LOC225264, Klhl14
Downstream geneLOC546708, LOC100040547, Asxl3, Nol4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-093J17.bB6Ng01-093J17.g
ACCDH905048DH905049
length7601,079
definitionDH905048|Mus musculus domesticus DNA, BAC clone: B6Ng01-093J17, 5' end.DH905049|Mus musculus domesticus DNA, BAC clone: B6Ng01-093J17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(21,860,683 - 21,861,440)(22,031,221 - 22,032,303)
sequence
gaattcattttcttgaataagaagggggattctttagatttagtagtttt
cgaaaaacaatcaccttcctcttgttttttaaaaaggcgttagggactct
cagcacttttgattcttgctggttcttgacatgagacaacccttctacgg
tagggttgtttctgccttgattagttttgagttgttaagttgtggaaatg
tgccacagaggaatgcctttatgaaaacaattgagtaagtcatttagaaa
gacctttatcctagtctatagccatacctgtatgcacccatcttatgtta
gaagctaagaagggtcaggcctggttaatacttggatgggagacaggact
gacgctaacttgagttttgccattgtggataagaatagctgcctggccac
attggaagggggttggttgttctgattagtttttgttaactagacacaat
cgtagacatccctggaaagaagaatctcaatggataaattgcctccatca
ggttggcctatagtcaagtctatggaggtgatttctgcctttcttttttt
tttttattagatatattttatttacatttcaaatgttatctcctttccta
gtttcccctctgataatcctctatcccctccccattcccctggtccccaa
cccacccactcccactttcctggccctggcattccccctatactgaggca
tagaagaaccttcacaggaccaaggacctcttctcccactgatggctgac
aaggccatct
gaattcactttgtggcagatagagagataatcagtaaattacttgttgta
agtcatgaatatctgagcccgtgtaaagaataaataaacaaagaacatgt
ttgcatggacttggaaccacagtaccccagtgcaggagaagtggacacag
gtggatccatgggtttgtgggctctagcccaatcagcaagttctcagcca
cagtggacagtattctcagcaagaaagcatatctacagttgacctctgac
ctatatatacttataaatacacacatgcacgcgcgtgcgcacacacacac
atatacacacaaagagaaaaagaaaaagttccaagacagtactacgaaat
gatgcaggctgtgcgggtaagagttctcttccaaggctagaacttgggaa
ttatacttagaactttttctgtttgagaaaaaggtagaaatattttagta
actgacaaattatatataactaaataatggatccaaatatttcaacatga
tgcatttatttttgctaattcattctgtgtgataagtcttcatttttccc
gatgatggatattagtgatatctaaaactgaatgagaatatcacccctga
agcaattagtatgcacggtgtgacagatttcagatcactcccccagtgct
gctgtgcaaaagcctgtgctgaaaaatacagtacagcgtataatgttgtt
ttgcagaaataacttttaagtattcaaattgagccctcactaacttaaac
tgtagctctgtgatttcatctaatgaaagagactaaatgaatccacgctg
acgcatcattggaatgtgcagaacatgaagaacaaatcacacaaatttcc
ccacttaattatagtgatagaaattcattgtcatattattgacctattgg
tcatgcccaagttaatcatgtctgaacctttcccagtgggaaataagctt
gttcacttctgtctttcagcatacccactaaaactcagtcacaatatgcc
cacagtcctgatcacggcagcccacggtacagttgtcctccaacacgaag
ctgcagtctgcataggccgggagacttga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_21860683_21861440
seq2: B6Ng01-093J17.b_43_801

seq1  GAATTCATTTTCTTGAATAAGAAGGGGGATTCTTTAGATTTAGTAGTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTTCTTGAATAAGAAGGGGGATTCTTTAGATTTAGTAGTTTT  50

seq1  CGAAAAACAATCACCTTCCTCTTGTTTTTTAAAAAGGCGTTAGGGACTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAAAACAATCACCTTCCTCTTGTTTTTTAAAAAGGCGTTAGGGACTCT  100

seq1  CAGCACTTTTGATTCTTGCTGGTTCTTGACATGAGACAACCCTTCTACGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACTTTTGATTCTTGCTGGTTCTTGACATGAGACAACCCTTCTACGG  150

seq1  TAGGGTTGTTTCTGCCTTGATTAGTTTTGAGTTGTTAAGTTGTGGAAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGTTGTTTCTGCCTTGATTAGTTTTGAGTTGTTAAGTTGTGGAAATG  200

seq1  TGCCACAGAGGAATGCCTTTATGAAAACAATTGAGTAAGTCATTTAGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCACAGAGGAATGCCTTTATGAAAACAATTGAGTAAGTCATTTAGAAA  250

seq1  GACCTTTATCCTAGTCTATAGCCATACCTGTATGCACCCATCTTATGTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTTTATCCTAGTCTATAGCCATACCTGTATGCACCCATCTTATGTTA  300

seq1  GAAGCTAAGAAGGGTCAGGCCTGGTTAATACTTGGATGGGAGACAGGACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTAAGAAGGGTCAGGCCTGGTTAATACTTGGATGGGAGACAGGACT  350

seq1  GACGCTAACTTGAGTTTTGCCATTGTGGATAAGAATAGCTGCCTGGCCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGCTAACTTGAGTTTTGCCATTGTGGATAAGAATAGCTGCCTGGCCAC  400

seq1  ATTGGAAGGGGGTTGGTTGTTCTGATTAGTTTTTGTTAACTAGACACAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGAAGGGGGTTGGTTGTTCTGATTAGTTTTTGTTAACTAGACACAAT  450

seq1  CGTAGACATCCCTGGAAAGAAGAATCTCAATGGATAAATTGCCTCCATCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTAGACATCCCTGGAAAGAAGAATCTCAATGGATAAATTGCCTCCATCA  500

seq1  GGTTGGCCTATAGTCAAGTCTATGGAGGTGATTTCTGCCTTTCTTTTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGGCCTATAGTCAAGTCTATGGAGGTGATTTCTGCCTTTCTTTTTTT  550

seq1  TTTTTATTAGATATATTTTATTTACATTTCAAATGTTATCTCCTTTCCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATTAGATATATTTTATTTACATTTCAAATGTTATCTCCTTTCCTA  600

seq1  GTTTCCCCTCTGATAATCCTCTATCCCCTCCCCATTCCCCTGGTCCCCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCCCTCTGATAATCCTCTATCCCCTCCCCATTCCCCTGGTCCCCAA  650

seq1  CCCACCCACTCCCAC-TTCCTGGCCCTGGCATTCCCCCTATACTGAGGCA  699
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CCCACCCACTCCCACTTTCCTGGCCCTGGCATTCCCCCTATACTGAGGCA  700

seq1  TAGAAGAACCTTCACAGGACCAAGGACCTCTCCTCCCACTGATGGCTGAC  749
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TAGAAGAACCTTCACAGGACCAAGGACCTCTTCTCCCACTGATGGCTGAC  750

seq1  AAGGCCATC  758
      |||||||||
seq2  AAGGCCATC  759

seq1: chr18_22031221_22032303
seq2: B6Ng01-093J17.g_68_1146 (reverse)

seq1  TCAAGTCTCCCGGGCTTACTGCAGACTGCAGCTTCGCTGTTGGA-GACAA  49
      ||||||||||||| ||   ||||||||||||||||| ||||||| |||||
seq2  TCAAGTCTCCCGGCCT--ATGCAGACTGCAGCTTCG-TGTTGGAGGACAA  47

seq1  CTGTTACGGTGGGCTGCCGTGATCAGGACTGTGGGCATA-TGTGACTGAG  98
      ||| ||| ||||||||||||||||||||||||||||||| ||||||||||
seq2  CTG-TACCGTGGGCTGCCGTGATCAGGACTGTGGGCATATTGTGACTGAG  96

seq1  TTTTAGTGGGTATGCTTGAAAGACAGGAAGTGAACAAGCTTATTTCCCAC  148
      ||||||||||||||| ||||||||| ||||||||||||||||||||||||
seq2  TTTTAGTGGGTATGC-TGAAAGACA-GAAGTGAACAAGCTTATTTCCCAC  144

seq1  TGGGAAAGGTTCAGACATGATTAACTTGGGCATGACCAAATAGGTCAATA  198
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TGGGAAAGGTTCAGACATGATTAACTTGGGCATGACC-AATAGGTCAATA  193

seq1  ATATGACAATGAATTTCTATCACTATAATTAAGTGGGGAAATTTGTGTGA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGACAATGAATTTCTATCACTATAATTAAGTGGGGAAATTTGTGTGA  243

seq1  TTTGTTCTTCATGTTCTGCACATTCCAATGATGCGTCAGCGTGGATTCAT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTCTTCATGTTCTGCACATTCCAATGATGCGTCAGCGTGGATTCAT  293

seq1  TTAGTCTCTTTCATTAGATGAAATCACAGAGCTACAGTTTAAGTTAGTGA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTCTCTTTCATTAGATGAAATCACAGAGCTACAGTTTAAGTTAGTGA  343

seq1  GGGCTCAATTTGAATACTTAAAAGTTATTTCTGCAAAACAACATTATACG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTCAATTTGAATACTTAAAAGTTATTTCTGCAAAACAACATTATACG  393

seq1  CTGTACTGTA-TTTTCAGCACAGGCTTTTGCACAGCAGCACTGGGGGAGT  447
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CTGTACTGTATTTTTCAGCACAGGCTTTTGCACAGCAGCACTGGGGGAGT  443

seq1  GATCTGAAATCTGTCACACCGTGCATACTAATTGCTTCAGGGGTGATATT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGAAATCTGTCACACCGTGCATACTAATTGCTTCAGGGGTGATATT  493

seq1  CTCATTCAGTTTTAGATATCACTAATATCCATCATCGGGAAAAATGAAGA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTCAGTTTTAGATATCACTAATATCCATCATCGGGAAAAATGAAGA  543

seq1  CTTATCACACAGAATGAATTAGCAAAAATAAATGCATCATGTTGAAATAT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATCACACAGAATGAATTAGCAAAAATAAATGCATCATGTTGAAATAT  593

seq1  TTGGATCCATTATTTAGTTATATATAATTTGTCAGTTACTAAAATATTTC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATCCATTATTTAGTTATATATAATTTGTCAGTTACTAAAATATTTC  643

seq1  TACCTTTTTCTCAAACAGAAAAAGTTCTAAGTATAATTCCCAAGTTCTAG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTTTTTCTCAAACAGAAAAAGTTCTAAGTATAATTCCCAAGTTCTAG  693

seq1  CCTTGGAAGAGAACTCTTACCCGCACAGCCTGCATCATTTCGTAGTACTG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGAAGAGAACTCTTACCCGCACAGCCTGCATCATTTCGTAGTACTG  743

seq1  TCTTGGAACTTTTTCTTTTTCTCTTTGTGTGTATATGTGTGTGTGTGCGC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGAACTTTTTCTTTTTCTCTTTGTGTGTATATGTGTGTGTGTGCGC  793

seq1  ACGCGCGTGCATGTGTGTATTTATAAGTATATATAGGTCAGAGGTCAACT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCGCGTGCATGTGTGTATTTATAAGTATATATAGGTCAGAGGTCAACT  843

seq1  GTAGATATGCTTTCTTGCTGAGAATACTGTCCACTGTGGCTGAGAACTTG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGATATGCTTTCTTGCTGAGAATACTGTCCACTGTGGCTGAGAACTTG  893

seq1  CTGATTGGGCTAGAGCCCACAAACCCATGGATCCACCTGTGTCCACTTCT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTGGGCTAGAGCCCACAAACCCATGGATCCACCTGTGTCCACTTCT  943

seq1  CCTGCACTGGGGTACTGTGGTTCCAAGTCCATGCAAACATGTTCTTTGTT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCACTGGGGTACTGTGGTTCCAAGTCCATGCAAACATGTTCTTTGTT  993

seq1  TATTTATTCTTTACACGGGCTCAGATATTCATGACTTACAACAAGTAATT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATTCTTTACACGGGCTCAGATATTCATGACTTACAACAAGTAATT  1043

seq1  TACTGATTATCTCTCTATCTGCCACAAAGTGAATTC  1083
      ||||||||||||||||||||||||||||||||||||
seq2  TACTGATTATCTCTCTATCTGCCACAAAGTGAATTC  1079