BAC Information

Click to search

BAC

Clone NameB6Ng01-095I13
Chromosome18 (Build37)
Map Location 14,940,319 - 15,108,665
singlet/doubletdoublet
Overlap geneTaf4b, LOC669965
Upstream geneZfp521, LOC100040094, LOC100040103, LOC100040391, LOC382096, LOC100040129, EG623867, Ss18, LOC100040446, Psma8
Downstream geneKctd1, EG622268, LOC100040151, Aqp4, LOC665473, Chst9, LOC670012, LOC100040551
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-095I13.bB6Ng01-095I13.g
ACCDH906453DH906454
length1,0341,133
definitionDH906453|Mus musculus domesticus DNA, BAC clone: B6Ng01-095I13, 5' end.DH906454|Mus musculus domesticus DNA, BAC clone: B6Ng01-095I13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(14,940,319 - 14,941,354)(15,107,539 - 15,108,665)
sequence
gaattcaggccctctgaaataacagtaggtgtgcttactacggagtccta
attattttaatattaatatttaggttttttgttttttgggtttttttttt
tttttttttttttttggttttttgagacagggtttctctgtatagccctg
gctgtcctggaactcactttgtagaccaggctggcctcgaactcagaaat
tcgcctgcttctgcatcctgagtgctgggattaaaggcgtgcgccaccac
gcccggccttaacattaatatttaatgtatgatttttgtttgtttattta
agagagggtcttgctatgtaaccctggctggcctggaactttctgtatag
caactcaggaagagagggaagaggggaggggagagaataagttccaggaa
agccagcaagaaacccggtctccggattctccctcccagcctcccgcccc
ccacaccccaaaaaagattttagagctggagtttgaagattaagaatcaa
aagacctgtcctagttttccggaagataacgtgtaaacaggttaacaatt
taaatatgctacgaaatgctcagcaggcaggaagaagccgaggcggggtt
acctcactttcaagtcaggaggagttccagaggattctaaactaccagag
taaaaagaaatatccaggtgtggaggtgtggcggggcgagccttgaattc
tagccctagggaggtagagataaggcgctctctgagttcaagggcagcta
gggcttaaatagtgagaccctgtctaaacaaaattcattaaaacaagcta
aaagtggacagagacatattaaaccgtgaggaggaataaaaaaatttccc
gtttgtttttgcctattaaaagccaaaatgaactttaggaactgtaacct
ataccctatttcgattttcccgtgtctactgttatgaaaatttttgccag
gctttccagggacgccggtaaaaacagaaaaatcaaaaacccaaaacaaa
tacatcccggaaaccaacaaactcaaagctgaga
gaattcctgttccagcttctcctttaacgccctgactgtgcaaactcagt
ccatttagactttggactaaacagttcagggtccatctgcttagaaacaa
gagtgcctgggtcttggctttgctattggtgagctacttgtgagcgtaac
cacactggccgagcactcacagctatgtgctgtattcacttaaggagacc
acatcatctgccacaaatctgcttctagacagttgcaagtcacacctcct
tgctctctccaggaacactcagtcattcccttcagctcctgctgttcttg
ggaacaaataagaaagcacagcacataggccagcctgcaagccctcactc
ctccactgcacattgccactactacggagattctggtttatccttatggt
ctacaaagagtttgccttttaaactccgacttcaatttggtcatatcggt
gcactccaaggaacagatatcatcttggccatgacttcagagccttgaga
aaatgatcattttgaggaaataaggatcttgcagtggttcctggttgtct
tagtcagggtttctattcctgcacaaacatcatgaccaagaagcaagctg
gggaggaaagggtttattcggcttacacttccacactgctgttcatcacc
aaaggaagtcaggactggaactcaaacaggtcaggaagcaggagctgatg
cagaggccatggagggatgttctttactggcttgcctcacctggctgctc
agcctgctctcttatagaacccaagactaccagcccagagatggtcccac
ccacaagggacctttcccctttgatcactaattgagaaaatgccttaaca
gttggatctcattggagcttttcctcaaattgaagcttctttctctgtga
taactccagctctgtcaggttgacaaaaaactagccagtacactggtgaa
atttcagaacactggcatttgcctttaatatctgcccactgggtgcttcg
caggctaacatctgtctttcaggagagctaatacctcctgcaagaacttg
agtttccctgaagaatcttgtggctaatgtcagcttcaccccagagctct
ggcctacaagtcctctgaatacaagtgttccca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_14940319_14941354
seq2: B6Ng01-095I13.b_48_1081

seq1  GAATTCAGGCCCTCTGAAATAACAGTAGGTGTGCTTACTACGGAGTCCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGCCCTCTGAAATAACAGTAGGTGTGCTTACTACGGAGTCCTA  50

seq1  ATTATTTTAATATTAATATTTAGGTTTTTTGTTTTTTGGGTTTTTTTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTTAATATTAATATTTAGGTTTTTTGTTTTTTGGGTTTTTTTTTT  100

seq1  TTTTTTTTTTTTTTTGGTTTTTTGAGACAGGGTTTCTCTGTATAGCCCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTTGGTTTTTTGAGACAGGGTTTCTCTGTATAGCCCTG  150

seq1  GCTGTCCTGGAACTCACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCCTGGAACTCACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAAT  200

seq1  TCGCCTGCTTCTGCATCCTGAGTGCTGGGATTAAAGGCGTGCGCCACCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCCTGCTTCTGCATCCTGAGTGCTGGGATTAAAGGCGTGCGCCACCAC  250

seq1  GCCCGGCCTTAACATTAATATTTAATGTATGATTTTTGTTTGTTTATTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCGGCCTTAACATTAATATTTAATGTATGATTTTTGTTTGTTTATTTA  300

seq1  AGAGAGGGTCTTGCTATGTAACCCTGGCTGGCCTGGAACTTTCTGTATAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGGGTCTTGCTATGTAACCCTGGCTGGCCTGGAACTTTCTGTATAG  350

seq1  CAACTCAGGAAGAGAGGGAAGAGGGGAGGGGAGAGAATAAGTTCCAGGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCAGGAAGAGAGGGAAGAGGGGAGGGGAGAGAATAAGTTCCAGGAA  400

seq1  AGCCAGCAAGAAACCCGGTCTCCGGATTCTCCCTCCCAGCCTCCCGCCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGCAAGAAACCCGGTCTCCGGATTCTCCCTCCCAGCCTCCCGCCCC  450

seq1  CCACACCCCAAAAAAGATTTTAGAGCTGGAGTTTGAAGATTAAGAATCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACCCCAAAAAAGATTTTAGAGCTGGAGTTTGAAGATTAAGAATCAA  500

seq1  AAGACCTGTCCTAGTTTTCCGGAAGATAACGTGTAAACAGGTTAACAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCTGTCCTAGTTTTCCGGAAGATAACGTGTAAACAGGTTAACAATT  550

seq1  TAAATATGCTACGAAATGCTCAGCAGGCAGGAAGAAGCCGAGGCGGGGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATATGCTACGAAATGCTCAGCAGGCAGGAAGAAGCCGAGGCGGGGTT  600

seq1  ACCTCACTTTCAAGTCAGGAGGAGTTCCAGAGGATCCTAAACTA-CAGAG  649
      ||||||||||||||||||||||||||||||||||| |||||||| |||||
seq2  ACCTCACTTTCAAGTCAGGAGGAGTTCCAGAGGATTCTAAACTACCAGAG  650

seq1  TAAAAAGAAAATATCCAGGTGTGGAGGTGTGGCGGGGCGAGCCTTGAATC  699
      ||||||| ||||||||||||||||||||||||||||||||||||||||| 
seq2  TAAAAAG-AAATATCCAGGTGTGGAGGTGTGGCGGGGCGAGCCTTGAATT  699

seq1  CTAGCCCTAGGGAGGTAGAGATAAGGCGCTCTCTGAGTTCAAGGCCAGCT  749
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CTAGCCCTAGGGAGGTAGAGATAAGGCGCTCTCTGAGTTCAAGGGCAGCT  749

seq1  AGGGC-TAAATAGTGAGACCCTGTCTAAACAAAATTCAGTAAAAACAAGC  798
      ||||| |||||||||||||||||||||||||||||||| | |||||||||
seq2  AGGGCTTAAATAGTGAGACCCTGTCTAAACAAAATTCA-TTAAAACAAGC  798

seq1  TAAAAGTGGACAGAGACATATAAACCAGTGAGGAGGAATAAAAAAATTTC  848
      ||||||||||||||||||||| || | |||||||||||||||||||||||
seq2  TAAAAGTGGACAGAGACATATTAAACCGTGAGGAGGAATAAAAAAATTTC  848

seq1  CAGTTTGTTTTAG-CTATTTAAAGTCTAAAATAATACTTTAGGAACTGTA  897
      | ||||||||| | ||||| |||| | ||||| | |||||||||||||| 
seq2  CCGTTTGTTTTTGCCTATTAAAAG-CCAAAATGA-ACTTTAGGAACTGT-  895

seq1  AACGTATACACTATTCTGATTTTCCCAGTGTCTACTGTTATGAAAATTTT  947
      ||| ||||| |||||  ||||||||| |||||||||||||||||||||||
seq2  AACCTATACCCTATTTCGATTTTCCC-GTGTCTACTGTTATGAAAATTTT  944

seq1  TGCCAGGCTTTCCAGGGACGCCGGAAAAAAACAGAAAAACAAAAAACCCA  997
      ||||||||||||||||||||||||  |||||||||||||  |||||||||
seq2  TGCCAGGCTTTCCAGGGACGCCGG-TAAAAACAGAAAAATCAAAAACCCA  993

seq1  AAACAAA-ACA-CCCGGAAACCAGACAAACCCAAAGC-GAGA  1036
      ||||||| ||| ||||||||||| |||||| |||||| ||||
seq2  AAACAAATACATCCCGGAAACCA-ACAAACTCAAAGCTGAGA  1034

seq1: chr18_15107539_15108665
seq2: B6Ng01-095I13.g_69_1201 (reverse)

seq1  TGGGAACACTTGTATTCAGAGTGACTTGTAGG-CAGAG-GCTGGGGTGAA  48
      ||||||||||||||||||||| |||||||||| |||||  ||||||||||
seq2  TGGGAACACTTGTATTCAGAG-GACTTGTAGGCCAGAGCTCTGGGGTGAA  49

seq1  GCTGGACA-TGGCCAC-AGAATCCTCAGGG-GACTCAAG-TCTTGCAGGA  94
      ||| |||| | ||||| ||| || ||||||  ||||||| ||||||||||
seq2  GCT-GACATTAGCCACAAGATTCTTCAGGGAAACTCAAGTTCTTGCAGGA  98

seq1  GGTAATAGC-CTCCTGGAAGACAGATGTTAGCCTGCGAAGCACCCAGTGG  143
      |||| |||| |||||| |||||||||||||||||||||||||||||||||
seq2  GGTATTAGCTCTCCTGAAAGACAGATGTTAGCCTGCGAAGCACCCAGTGG  148

seq1  GCAGATATTAAAGGCAAATGCCAGTTGTCTGAAATTTCACCAGTGTACTG  193
      |||||||||||||||||||||||||  |||||||||||||||||||||||
seq2  GCAGATATTAAAGGCAAATGCCAGTGTTCTGAAATTTCACCAGTGTACTG  198

seq1  GCTAGTTTTGTGTCAACTTGACAGAGCTGGAGTTATCACAGAGAAAGGAG  243
      ||||||||| ||||||| ||||||||||||||||||||||||||||| ||
seq2  GCTAGTTTTTTGTCAACCTGACAGAGCTGGAGTTATCACAGAGAAAGAAG  248

seq1  CTTC-AGTTGAGGAAATGCCTCCATGAGATCCAACTG-TAAGGCATTTTC  291
      |||| | ||||||||| ||  | |||||||||||||| ||||||||||||
seq2  CTTCAATTTGAGGAAAAGCTCCAATGAGATCCAACTGTTAAGGCATTTTC  298

seq1  TCAATTAGTGATCAAGGGGGAAAGGTCCCTTGTGGGTGGGACCATCTCTG  341
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TCAATTAGTGATCAAAGGGGAAAGGTCCCTTGTGGGTGGGACCATCTCTG  348

seq1  GGCTGGTAGTCTTGGGTTCTATAAGAGAGCAGGCTGAGCAAGCCAGGTGA  391
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GGCTGGTAGTCTTGGGTTCTATAAGAGAGCAGGCTGAGC-AGCCAGGTGA  397

seq1  GGCAAGCCAGTAAAGAACATCCCTCCATGGCCTCTGCATCAGCTCCTGCT  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGCCAGTAAAGAACATCCCTCCATGGCCTCTGCATCAGCTCCTGCT  447

seq1  TCCTGACCTGTTTGAGTTCCAGTCCTGACTTCCTTTGGTGATGAACAGCA  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGACCTGTTTGAGTTCCAGTCCTGACTTCCTTTGGTGATGAACAGCA  497

seq1  GTGTGGAAGTGTAAGCCGAATAAACCCTTTCCTCCCCAGCTTGCTTCTTG  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGAAGTGTAAGCCGAATAAACCCTTTCCTCCCCAGCTTGCTTCTTG  547

seq1  GTCATGATGTTTGTGCAGGAATAGAAACCCTGACTAAGACAACCAGGAAC  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATGATGTTTGTGCAGGAATAGAAACCCTGACTAAGACAACCAGGAAC  597

seq1  CACTGCAAGATCCTTATTTCCTCAAAATGATCATTTTCTCAAGGCTCTGA  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCAAGATCCTTATTTCCTCAAAATGATCATTTTCTCAAGGCTCTGA  647

seq1  AGTCATGGCCAAGATGATATCTGTTCCTTGGAGTGCACCGATATGACCAA  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATGGCCAAGATGATATCTGTTCCTTGGAGTGCACCGATATGACCAA  697

seq1  ATTGAAGTCGGAGTTTAAAAGGCAAACTCTTTGTAGACCATAAGGATAAA  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAGTCGGAGTTTAAAAGGCAAACTCTTTGTAGACCATAAGGATAAA  747

seq1  CCAGAATCTCCGTAGTAGTGGCAATGTGCAGTGGAGGAGTGAGGGCTTGC  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAATCTCCGTAGTAGTGGCAATGTGCAGTGGAGGAGTGAGGGCTTGC  797

seq1  AGGCTGGCCTATGTGCTGTGCTTTCTTATTTGTTCCCAAGAACAGCAGGA  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGGCCTATGTGCTGTGCTTTCTTATTTGTTCCCAAGAACAGCAGGA  847

seq1  GCTGAAGGGAATGACTGAGTGTTCCTGGAGAGAGCAAGGAGGTGTGACTT  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAAGGGAATGACTGAGTGTTCCTGGAGAGAGCAAGGAGGTGTGACTT  897

seq1  GCAACTGTCTAGAAGCAGATTTGTGGCAGATGATGTGGTCTCCTTAAGTG  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACTGTCTAGAAGCAGATTTGTGGCAGATGATGTGGTCTCCTTAAGTG  947

seq1  AATACAGCACATAGCTGTGAGTGCTCGGCCAGTGTGGTTACGCTCACAAG  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACAGCACATAGCTGTGAGTGCTCGGCCAGTGTGGTTACGCTCACAAG  997

seq1  TAGCTCACCAATAGCAAAGCCAAGACCCAGGCACTCTTGTTTCTAAGCAG  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTCACCAATAGCAAAGCCAAGACCCAGGCACTCTTGTTTCTAAGCAG  1047

seq1  ATGGACCCTGAACTGTTTAGTCCAAAGTCTAAATGGACTGAGTTTGCACA  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGACCCTGAACTGTTTAGTCCAAAGTCTAAATGGACTGAGTTTGCACA  1097

seq1  GTCAGGGCGTTAAAGGAGAAGCTGGAACAGGAATTC  1127
      ||||||||||||||||||||||||||||||||||||
seq2  GTCAGGGCGTTAAAGGAGAAGCTGGAACAGGAATTC  1133