BAC Information

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BAC

Clone NameB6Ng01-096M23
Chromosome18 (Build37)
Map Location 58,813,151 - 58,929,360
singlet/doubletdoublet
Overlap geneIsoc1
Upstream gene1700011I03Rik, Slc12a2, 9330166H04Rik, Fbn2, Slc27a6
Downstream geneAdamts19, A730017C20Rik, 4833446K15Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-096M23.bB6Ng01-096M23.g
ACCDH907353DH907354
length1,0871,149
definitionDH907353|Mus musculus domesticus DNA, BAC clone: B6Ng01-096M23, 5' end.DH907354|Mus musculus domesticus DNA, BAC clone: B6Ng01-096M23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(58,928,270 - 58,929,360)(58,813,151 - 58,814,282)
sequence
gaattcagagaaaaaaatcattatttagctcatactcattcaactttaag
aactcaatcaagtcatacagaccctaagagaacacaaatgccagcccagg
ctacaatacccagcaaaactctcaatcaccatagatggagaaaacacgat
atcccatgacaaaaccaaatttacacaatatctttccacaaatccagccc
tacaaaggataatagatggaaaacaccaacacaaggagtgagactacacc
ctaggagaagcaagaaagtaatctttcaacaaacccacaaaaacataatt
ccatatttaacaagaaaattaacaggaagtaacaataacttttccttaat
gtctcttagtatgaaaattaatattaccaacatattctagtcaattgaaa
ttcaaaaatatgaggaattagaaatttattggctgtcatcccatggtctc
tctaatttggtaatgggaggaataggtccaatatggtacaatccatatat
actttctgcttgtttgtacatgacagggtcttgctgtgtgccacataatg
gtcttgaaatcatgcttctcctatctcagactctctattagtaggattgt
ttatttgatgtttttacattatactatggctttcagaacagcttacacat
ttcaaaattatttatgcagccaaaagaagtgtggacaattaacttgggag
gtggcttgtaagagaacaacaaagagtgagattgaaggctttgcttgata
tttataattattgtatcaatttggagaaaaggactttataagttactctt
attctgagatgaatgctttgcaaaattatcacagccaatgaaccagaatc
ttatactcacctaacgtctgtgtgccaccctctaagcagaaccattgttc
attgaaacagttgatgaatgacatcatggatagaccatcttaacacacac
accatttcttaaatgaatgtaacctattccctgcgggctgagatgatgac
atcacctcaaatcaatagcttgaccgtagcagaatctgcatctaaaactg
gtgcctacaattcatttccttggcacagtagaactgt
gaattctctgatagcaccaagattgttcctgtcaacttctcaggaaggga
gacatggatactgagtgctgggctaacttcaaaggttctgccaatcccct
gtcaaagagttccaatcacaaatggcatttgccgcaggtggcacgcccac
ttacacttgagcaacagtacagtgactaagaattgcacacaagtaacggc
tgaagtagcaaaaggaaggcagaataatgattgagtagaggtgtagccaa
gcttcctgaagctgggcaatttcaagatcttaagacaaattttgtagaca
ataggattttccagtttaggaaagagtttataagttggatttcatttttt
tttcttcccattccaggagtctatttattgaaaaatgaaccagactccac
actagacagaaacatcctgatgcaatacatagaaatgccaaaattcaaaa
cgtaataaattataaacactttctgtcctcaaaggatgatcgtggagaag
tgaatgtactaaaatagaaatgtgtctctgaaagcaaattctttgaaaag
aaaatatgacagctaggaatagcagagcaggtcagaattacggctgcctt
agacgcagtgacagatgagtatactacacagagacaaaagaacaggagag
atttaaaaagagtatatgggaatgtgtcacagaaagatatgaacacttaa
tcaactcctttattttctgatcttaaaccagtcacctgcttgtatcttta
tgcacataaattaattgcttttcttccactgtgataaagtagctctgaga
gattactcacttgcagacctcctctggagactagctagctcctcccccag
tgctgtacccaatgaacacaaacacggagggttctaggctgcatttatag
acaccatcttattctagctttcactgaacagtgcctgtgtgtctgtcctt
ctcattccttctctgccttagccaggggtttcaggatccaaagtagcagg
agtctgcacattatttgtttgatctttttactgggtttaaatgactggtg
aaatagaaacactggtggtaacattttattttgttgccttcctgacttct
cgatgcacaacaccttggggtgtgcttcttgggcaattattctttcttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_58928270_58929360
seq2: B6Ng01-096M23.b_49_1135 (reverse)

seq1  ACAGTTCTACTGTGCCAAGG-AATGAATTGTAGGCACAGTTTTTAGATGC  49
      |||||||||||||||||||| ||||||||||||||||   ||||||||||
seq2  ACAGTTCTACTGTGCCAAGGAAATGAATTGTAGGCACCAGTTTTAGATGC  50

seq1  AGATTTCCTGCTACGGTCAAAGCTATTTGATTTGA-GTGATTGTCATCAT  98
      |||||  ||||||||||| |||||| ||||||||| |||| |||||||| 
seq2  AGATT--CTGCTACGGTC-AAGCTA-TTGATTTGAGGTGA-TGTCATCA-  94

seq1  TCTCAGCCCGCAGGGAATAGGTTACATTCATTTAAGAAATGGTGTGTGTG  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGCCCGCAGGGAATAGGTTACATTCATTTAAGAAATGGTGTGTGTG  144

seq1  TTAAGATGGTCTATCCATGATGTCATTCATCAACTGTTTCAATGAACAAT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGATGGTCTATCCATGATGTCATTCATCAACTGTTTCAATGAACAAT  194

seq1  GGTTCTGCTTAGAGGGTGGCACACAGACGTTAGGTGAGTATAAGATTCTG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCTGCTTAGAGGGTGGCACACAGACGTTAGGTGAGTATAAGATTCTG  244

seq1  GTTCATTGGCTGTGATAATTTTGCAAAGCATTCATCTCAGAATAAGAGTA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATTGGCTGTGATAATTTTGCAAAGCATTCATCTCAGAATAAGAGTA  294

seq1  ACTTATAAAGTCCTTTTCTCCAAATTGATACAATAATTATAAATATCAAG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATAAAGTCCTTTTCTCCAAATTGATACAATAATTATAAATATCAAG  344

seq1  CAAAGCCTTCAATCTCACTCTTTGTTGTTCTCTTACAAGCCACCTCCCAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCCTTCAATCTCACTCTTTGTTGTTCTCTTACAAGCCACCTCCCAA  394

seq1  GTTAATTGTCCACACTTCTTTTGGCTGCATAAATAATTTTGAAATGTGTA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATTGTCCACACTTCTTTTGGCTGCATAAATAATTTTGAAATGTGTA  444

seq1  AGCTGTTCTGAAAGCCATAGTATAATGTAAAAACATCAAATAAACAATCC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTTCTGAAAGCCATAGTATAATGTAAAAACATCAAATAAACAATCC  494

seq1  TACTAATAGAGAGTCTGAGATAGGAGAAGCATGATTTCAAGACCATTATG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAATAGAGAGTCTGAGATAGGAGAAGCATGATTTCAAGACCATTATG  544

seq1  TGGCACACAGCAAGACCCTGTCATGTACAAACAAGCAGAAAGTATATATG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCACACAGCAAGACCCTGTCATGTACAAACAAGCAGAAAGTATATATG  594

seq1  GATTGTACCATATTGGACCTATTCCTCCCATTACCAAATTAGAGAGACCA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGTACCATATTGGACCTATTCCTCCCATTACCAAATTAGAGAGACCA  644

seq1  TGGGATGACAGCCAATAAATTTCTAATTCCTCATATTTTTGAATTTCAAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGATGACAGCCAATAAATTTCTAATTCCTCATATTTTTGAATTTCAAT  694

seq1  TGACTAGAATATGTTGGTAATATTAATTTTCATACTAAGAGACATTAAGG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTAGAATATGTTGGTAATATTAATTTTCATACTAAGAGACATTAAGG  744

seq1  AAAAGTTATTGTTACTTCCTGTTAATTTTCTTGTTAAATATGGAATTATG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTTATTGTTACTTCCTGTTAATTTTCTTGTTAAATATGGAATTATG  794

seq1  TTTTTGTGGGTTTGTTGAAAGATTACTTTCTTGCTTCTCCTAGGGTGTAG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTGGGTTTGTTGAAAGATTACTTTCTTGCTTCTCCTAGGGTGTAG  844

seq1  TCTCACTCCTTGTGTTGGTGTTTTCCATCTATTATCCTTTGTAGGGCTGG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACTCCTTGTGTTGGTGTTTTCCATCTATTATCCTTTGTAGGGCTGG  894

seq1  ATTTGTGGAAAGATATTGTGTAAATTTGGTTTTGTCATGGGATATCGTGT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTGGAAAGATATTGTGTAAATTTGGTTTTGTCATGGGATATCGTGT  944

seq1  TTTCTCCATCTATGGTGATTGAGAGTTTTGCTGGGTATTGTAGCCTGGGC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCCATCTATGGTGATTGAGAGTTTTGCTGGGTATTGTAGCCTGGGC  994

seq1  TGGCATTTGTGTTCTCTTAGGGTCTGTATGACTTGATTGAGTTCTTAAAG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATTTGTGTTCTCTTAGGGTCTGTATGACTTGATTGAGTTCTTAAAG  1044

seq1  TTGAATGAGTATGAGCTAAATAATGATTTTTTTCTCTGAATTC  1091
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATGAGTATGAGCTAAATAATGATTTTTTTCTCTGAATTC  1087

seq1: chr18_58813151_58814282
seq2: B6Ng01-096M23.g_66_1214

seq1  GAATTCTCTGATAGCACCAAGATTGTTCCTGTCAACTTCTCAGGAAGGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGATAGCACCAAGATTGTTCCTGTCAACTTCTCAGGAAGGGA  50

seq1  GACATGGATACTGAGTGCTGGGCTAACTTCAAAGGTTCTGCCAATCCCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGGATACTGAGTGCTGGGCTAACTTCAAAGGTTCTGCCAATCCCCT  100

seq1  GTCAAAGAGTTCCAATCACAAATGGCATTTGCCGCAGGTGGCACGCCCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAAGAGTTCCAATCACAAATGGCATTTGCCGCAGGTGGCACGCCCAC  150

seq1  TTACACTTGAGCAACAGTACAGTGACTAAGAATTGCACACAAGTAACGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACACTTGAGCAACAGTACAGTGACTAAGAATTGCACACAAGTAACGGC  200

seq1  TGAAGTAGCAAAAGGAAGGCAGAATAATGATTGAGTAGAGGTGTAGCCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTAGCAAAAGGAAGGCAGAATAATGATTGAGTAGAGGTGTAGCCAA  250

seq1  GCTTCCTGAAGCTGGGCAATTTCAAGATCTTAAGACAAATTTTGTAGACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCTGAAGCTGGGCAATTTCAAGATCTTAAGACAAATTTTGTAGACA  300

seq1  ATAGGATTTTCCAGTTTAGGAAAGAGTTTATAAGTTGGATTTCATTTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGATTTTCCAGTTTAGGAAAGAGTTTATAAGTTGGATTTCATTTTTT  350

seq1  TTTCTTCCCATTCCAGGAGTCTATTTATTGAAAAATGAACCAGACTCCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTCCCATTCCAGGAGTCTATTTATTGAAAAATGAACCAGACTCCAC  400

seq1  ACTAGACAGAAACATCCTGATGCAATACATAGAAATGCCAAAATTCAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGACAGAAACATCCTGATGCAATACATAGAAATGCCAAAATTCAAAA  450

seq1  CGTAATAAATTATAAACACTTTCTGTCCTCAAAGGATGATCGTGGAGAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTAATAAATTATAAACACTTTCTGTCCTCAAAGGATGATCGTGGAGAAG  500

seq1  TGAATGTACTAAAATAGAAATGTGTCTCTGAAAGCAAATTCTTTGAAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGTACTAAAATAGAAATGTGTCTCTGAAAGCAAATTCTTTGAAAAG  550

seq1  AAAATATGACAGCTAGGAATAGCAGAGCAGGTCAGAATTACGGCTGCCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATGACAGCTAGGAATAGCAGAGCAGGTCAGAATTACGGCTGCCTT  600

seq1  AGACGCAGTGACAGATGAGTATACTACACAGAGACAAAAGAACAGGAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACGCAGTGACAGATGAGTATACTACACAGAGACAAAAGAACAGGAGAG  650

seq1  ATTTAAAAAGAGTATATGGGAATGTGTCACAGAAAGATATGAACACTTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAAAAGAGTATATGGGAATGTGTCACAGAAAGATATGAACACTTAA  700

seq1  TCAACTCCTTTATTTTCTGATCTTAAACCAGTCACCTGCTTGTATCTTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACTCCTTTATTTTCTGATCTTAAACCAGTCACCTGCTTGTATCTTTA  750

seq1  TGCACATAAATTAATTGCTTTTCTTCCACTGTGATAAAGTAGCTCTGAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACATAAATTAATTGCTTTTCTTCCACTGTGATAAAGTAGCTCTGAGA  800

seq1  GATTACTCACTTGCAGACCTCCTCTGGAGACTAGCTAGCTCCTCCCCCAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTACTCACTTGCAGACCTCCTCTGGAGACTAGCTAGCTCCTCCCCCAG  850

seq1  TGCTGTACCCAATGAACACAAACACGGA-GGTTCTAGGCTGCATTTATAG  899
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TGCTGTACCCAATGAACACAAACACGGAGGGTTCTAGGCTGCATTTATAG  900

seq1  ACACCATCTTATTCTAGC-TTCACTGAACAGTGCCTGTGTGTCTGTCCCT  948
      |||||||||||||||||| ||||||||||||||||||||||||||| |||
seq2  ACACCATCTTATTCTAGCTTTCACTGAACAGTGCCTGTGTGTCTGT-CCT  949

seq1  TCTCATTCCTTCTCTGCCCTTAGCCA-GGGTTTCAGGATCCAAAAGTAGC  997
      |||||||||||||||| ||||||||| |||||||||||||| ||||||||
seq2  TCTCATTCCTTCTCTG-CCTTAGCCAGGGGTTTCAGGATCC-AAAGTAGC  997

seq1  AGGAGTCTGCACAT--ATTGTTTGATCTTTTAACTGG--TTTAATGACT-  1042
      ||||||||||||||   |||||||||||||| |||||  || ||||||| 
seq2  AGGAGTCTGCACATTATTTGTTTGATCTTTTTACTGGGTTTAAATGACTG  1047

seq1  GTGAAATAG-AACACT-GTG--TACATTTTATTT--GTGCCTTCCTGACT  1086
      ||||||||| |||||| |||   |||||||||||   |||||||||||||
seq2  GTGAAATAGAAACACTGGTGGTAACATTTTATTTTGTTGCCTTCCTGACT  1097

seq1  TCTCGATGCAC-ACACTT----GTGTGCTTCTTGGGCATTTA-TCTTTCT  1130
      ||||||||||| |||| |    |||||||||||||||| ||| |||||||
seq2  TCTCGATGCACAACACCTTGGGGTGTGCTTCTTGGGCAATTATTCTTTCT  1147

seq1  TC  1132
      ||
seq2  TC  1149