BAC Information

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BAC

Clone NameB6Ng01-098P13
Chromosome18 (Build37)
Map Location 16,333,585 - 16,334,716
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040151, Aqp4, LOC665473, Chst9, LOC670012, LOC100040551, EG225228, LOC100040202
Downstream genePpia-ps18_172.1, EG665509, Cdh2, LOC665519, 1700001G01Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-098P13.bB6Ng01-098P13.g
ACCDH908899DH908900
length1,1781,112
definitionDH908899|Mus musculus domesticus DNA, BAC clone: B6Ng01-098P13, 5' end.DH908900|Mus musculus domesticus DNA, BAC clone: B6Ng01-098P13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccaaatggctgagaagcacctgaaaaatgt
tcaccatccttaatcatcaaggaaatgcaaatcaaaacaaccctgagatt
ccacctcacaccagtcagaatggctaagataaaaaattcaggtgatagca
gatgatgtccatgatgtggggagagaggagcactcttccattgttgatgg
gatggcaaccactctggaaatcaatctggtggttcctcagaaaattggac
attgtactactggaggatcccacaataccttcctgggcatatatccagaa
gatgtttcaactggtaagaaggacacatgctccactatgttcatagcagc
cttatttataatagccagaagctgtaaacaacccagatgcccctcaacag
aggactggatacagaaaatgtggtacatttacacaatgaagtactactca
gctattaaaaagaatgaatttatgaaattcctaggcaaatagatggacct
ggacggcatcatcctgagtgaggtaacccaatcacaaaagtactcacgtg
atatatactcactgataagtggatattagcccagaaacttagaataacca
agatataagatacaatttgtaaaacacatgaaactgaagaacgaagacca
aagtgtggacactttgcccttttttagaattgggaacaaaacacccatgg
aaaggggttacagagacaaaatgtggagttgagatgaaaaaatggaccat
ctagatactgccatacccacggatccatcccataatcagccaccaaacgc
tgacaccattgcatataccagtaagattttgctgaaggaccctgatatag
ctgtctcttgtgaggctatcttgggcctagcaaacacagaaatggatgct
catagtcagctatttgatggatcacaaggcccctatggaggagctagaga
aagtacccaaaggagctaaagggatttgcaacccttataggtggaacaac
atatgacctaaccagtaccctcagagcttcgtgtctcttagttgcatgtt
tcagaagatggcctagtcttgccatcagtggaaaaagaggcccatcggtc
tttgcaaactttaatatgcctaaatatcaagggaatgtcattggtcaaga
aatggtgaatgttgatggtggtggaagt
gaattcttttgtttcctcttcctttgtgcctgtccttccctgaaacattg
aatcttacaaaaataaccatcatctagtgcaagaaatggaaactcaatag
acacccaatggttcatttttcttaatgaattaatgtcctcagcagtatct
caacaggaatttctagtaaacatatgactctgggattttttttaaatctt
attatctttgattttagtaaatatcaattgctctattcaactcctccaac
tgtgctcaaattaagcttaccaatgagtacaagttttgaaatagaaatgc
cctgaagagctggaggagaagagtataagtataaagggagcagtgtttat
aaaactgtcaaatttgtttcccctttgtggcataatcttgccaacaaata
aaaagatttttctgtgggttactaatctgaaagtcaagttcatcagtcac
aatcacagttcattgaggatagcacaggttctaacagggaaagtaaattt
gtgcctgcagaatctatcaagctgtcctgaattaagggcatgcctgctaa
agtaccagggtctgccagaggtagtaatcagtagggagatttggctaata
cagggttcagaattttttggatggccaagacagctggctgaagccatttg
tcctctggcagaaggaatagagatggcctgatgtatacactgtcagaaag
aggttgttttccctttcccaaaacaaattaaatgtggatcagattttctc
ttgggataatcctgaaattagatccacgattatgacatctaatatccatc
tcaaaagaattcatattatgcaatgggttccatttgtgtaggctcagtta
gggatacctttggcagatgataggactcaatgtctacaaatgaacttcag
agttctatcttcaaaatggttagcacattattttttatagatatttctct
aaaatataaattatcttttccttttaattactcactgataaagaaatcaa
acagctgcttaggaaagccactcatcattgcccatttcaaattctgtaca
ttcagtgatttggccattctgaaacaagagttggttagtttacacttaac
ctacccaaatct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_16333585_16334716
seq2: B6Ng01-098P13.g_72_1183

seq1  GAATTCTTTTGTTTCCTCTTCCTTTGTGCCTGTCCTTCCCTGAAACATTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTGTTTCCTCTTCCTTTGTGCCTGTCCTTCCCTGAAACATTG  50

seq1  AATCTTACAAAAATAACCATCATCTAGTGCAAGAAATGGAAACTCAATAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTACAAAAATAACCATCATCTAGTGCAAGAAATGGAAACTCAATAG  100

seq1  ACACCCAATGGTTCATTTTTCTTAATGAATTAATGTCCTCAGCAGTATCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCCAATGGTTCATTTTTCTTAATGAATTAATGTCCTCAGCAGTATCT  150

seq1  CAACAGGAATTTCTAGTAAACATATGACTCTGGGATTTTTTTTAAATCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGGAATTTCTAGTAAACATATGACTCTGGGATTTTTTTTAAATCTT  200

seq1  ATTATCTTTGATTTTAGTAAATATCAATTGCTCTATTCAACTCCTCCAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCTTTGATTTTAGTAAATATCAATTGCTCTATTCAACTCCTCCAAC  250

seq1  TGTGCTCAAATTAAGCTTACCAATGAGTACAAGTTTTGAAATAGAAATGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTCAAATTAAGCTTACCAATGAGTACAAGTTTTGAAATAGAAATGC  300

seq1  CCTGAAGAGCTGGAGGAGAAGAGTATAAGTATAAAGGGAGCAGTGTTTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAAGAGCTGGAGGAGAAGAGTATAAGTATAAAGGGAGCAGTGTTTAT  350

seq1  AAAACTGTCAAATTTGTTTCCCCTTTGTGGCATAATCTTGCCAACAAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTGTCAAATTTGTTTCCCCTTTGTGGCATAATCTTGCCAACAAATA  400

seq1  AAAAGATTTTTCTGTGGGTTACTAATCTGAAAGTCAAGTTCATCAGTCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGATTTTTCTGTGGGTTACTAATCTGAAAGTCAAGTTCATCAGTCAC  450

seq1  AATCACAGTTCATTGAGGATAGCACAGGTTCTAACAGGGAAAGTAAATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACAGTTCATTGAGGATAGCACAGGTTCTAACAGGGAAAGTAAATTT  500

seq1  GTGCCTGCAGAATCTATCAAGCTGTCCTGAATTAAGGGCATGCCTGCTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTGCAGAATCTATCAAGCTGTCCTGAATTAAGGGCATGCCTGCTAA  550

seq1  AGTACCAGGGTCTGCCAGAGGTAGTAATCAGTAGGGAGATTTGGCTAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACCAGGGTCTGCCAGAGGTAGTAATCAGTAGGGAGATTTGGCTAATA  600

seq1  CAGGGTTCAGAATTTTTTGGATGGCCAAGACAGCTGGCTGAAGCCATTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTTCAGAATTTTTTGGATGGCCAAGACAGCTGGCTGAAGCCATTTG  650

seq1  TCCTCTGGCAGAAGGAATAGAGATGGCCTGATGTATACACTGTCAGAAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTGGCAGAAGGAATAGAGATGGCCTGATGTATACACTGTCAGAAAG  700

seq1  AGGTTGTTTTCCCTTTCCCAAAACAAATTAAATGTGGATCAGATTTTCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTGTTTTCCCTTTCCCAAAACAAATTAAATGTGGATCAGATTTTCTC  750

seq1  TTGGGATAATCCTGAAATTAGATCCACGATTATGACATCTAATATCCATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGATAATCCTGAAATTAGATCCACGATTATGACATCTAATATCCATC  800

seq1  TCAAAAGAATTCATATTATGCAATGGGTTCCATTTGTGTAGGCTCAGTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAGAATTCATATTATGCAATGGGTTCCATTTGTGTAGGCTCAGTTA  850

seq1  GGGATACCTTTGGCAGATGATAGGACTCAATGTCTACAAATGAACTTCAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATACCTTTGGCAGATGATAGGACTCAATGTCTACAAATGAACTTCAG  900

seq1  AGTTCTATCTTCAAAATGGTTAGCACATTATTTTTTATAAGAATATTTCT  950
      |||||||||||||||||||||||||||||||||||||||   ||||||||
seq2  AGTTCTATCTTCAAAATGGTTAGCACATTATTTTTTATA--GATATTTCT  948

seq1  CCTAAAATATAAATTATCTTTTCCTTTTAATTAACTCACTGATAAAGATA  1000
       ||||||||||||||||||||||||||||||| ||||||||||||||| |
seq2  -CTAAAATATAAATTATCTTTTCCTTTTAATT-ACTCACTGATAAAGAAA  996

seq1  TCAAACAGCTGGCTTAGGAAAGCCACTCAATCATTTGCCCATTTTCAAAT  1050
      |||||||||| ||||||||||||||||| |||| ||||||| ||||||||
seq2  TCAAACAGCT-GCTTAGGAAAGCCACTC-ATCA-TTGCCCA-TTTCAAAT  1042

seq1  TCTGTACATTCCAAGTGAATTTTGGCCATTCTGAAACAAGGGAGTTTTGG  1100
      |||||||||||  |||||  |||||||||||||||||||| |    ||||
seq2  TCTGTACATTC--AGTGA--TTTGGCCATTCTGAAACAAGAG----TTGG  1084

seq1  TTATGGTTTTACACTTTAACTACCCAATATCT  1132
      |||    ||||||||| | |||||||| ||||
seq2  TTA---GTTTACACTTAACCTACCCAA-ATCT  1112