BAC Information

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BAC

Clone NameB6Ng01-099B01
Chromosome4 (Build37)18 (Build37)
Map Location 71,953,379 - 71,953,49226,720,531 - 26,721,049
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100039979, LOC667638, EG667649, Tle1
Downstream geneAldoa-ps2, EG384113, LOC667713, LOC100039698
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-099B01.bB6Ng01-099B01.g
ACCDH908966DH908967
length114588
definitionDH908966|Mus musculus domesticus DNA, BAC clone: B6Ng01-099B01, 5' end.DH908967|Mus musculus domesticus DNA, BAC clone: B6Ng01-099B01, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(71,953,379 - 71,953,492)(26,720,531 - 26,721,049)
sequence
tgtaataattttcttatagtgtatcatcatttacaactttatatctaagg
aaaataaagcttttactcttggaaaaaagaagaagaagaaggaggaggag
gaggaggaggagga
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_71953379_71953492
seq2: B6Ng01-099B01.b_48_161

seq1  TGTAATAATTTTCTTATAGTGTATCATCATTTACAACTTTATATCTAAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATAATTTTCTTATAGTGTATCATCATTTACAACTTTATATCTAAGG  50

seq1  AAAATAAAGCTTTTACTCTTGGAAAAAAGAAGAAGAAGAAGGAGGAGGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAAGCTTTTACTCTTGGAAAAAAGAAGAAGAAGAAGGAGGAGGAG  100

seq1  GAGGAGGAGGAGGA  114
      ||||||||||||||
seq2  GAGGAGGAGGAGGA  114

seq1: chr18_26720531_26721049
seq2: B6Ng01-099B01.g_136_654

seq1  AGGGAAATGCAAATCAAAACAACCCTGAGATTCCACCTCACACCAGTGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAATGCAAATCAAAACAACCCTGAGATTCCACCTCACACCAGTGAG  50

seq1  AATGGCTAAGATCAAAAATTCAGGTGACAGCAGATGCTGGCGAGGATGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCTAAGATCAAAAATTCAGGTGACAGCAGATGCTGGCGAGGATGTG  100

seq1  GAGAAAGAGGAACACTCCTCCATTGTTGGTGGGATTGCAGGCTTGTACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAGAGGAACACTCCTCCATTGTTGGTGGGATTGCAGGCTTGTACAA  150

seq1  CCACTCTGGAAATCAGTCTGGCGGTTCCTCAGAAAATTGGACATAGTACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTCTGGAAATCAGTCTGGCGGTTCCTCAGAAAATTGGACATAGTACT  200

seq1  ACCGGAGGATCCAGCAATACCTCTCCTGGGCATATATCCAGAAGAAGCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGGAGGATCCAGCAATACCTCTCCTGGGCATATATCCAGAAGAAGCCC  250

seq1  CAACTGGTAAGAAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGGTAAGAAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTT  300

seq1  ATAATAGTCAGAAACTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATG  350
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAGCCAGAAACTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATG  350

seq1  GATACAGAAAATGTGGTACATCTACACAATGGAGTACTACTCAGCTATTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACAGAAAATGTGGTACATCTACACAATGGAGTACTACTCAGCTATTA  400

seq1  AAAAGAATGAATTTATGAAATTCCTAGCCAAATGGATGGACCTGGAGAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAATGAATTTATGAAATTCCTAGCCAAATGGATGGACCTGGAGAGC  450

seq1  ATCATCCTGAGTGAGGTAACACAATCACAAAGGAACTCACACAATATGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCCTGAGTGAGGTAACACAATCACAAAGGAACTCACACAATATGTA  500

seq1  CTCACTGATAAGTGGATAC  519
      |||||||||||||||||||
seq2  CTCACTGATAAGTGGATAC  519