BAC Information

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BAC

Clone NameB6Ng01-101F13
Chromosome18 (Build37)
Map Location 23,444,992 - 23,617,670
singlet/doubletdoublet
Overlap geneDtna
Upstream geneLOC546708, LOC100040547, Asxl3, Nol4, LOC100040579, LOC665797
Downstream geneMapre2, EG665813, LOC100040623, Zfp397, C230097I24Rik, Zfp35, Zfp191, D030070L09Rik, Galnt1, LOC665586
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-101F13.bB6Ng01-101F13.g
ACCDH910559DH910560
length1,0161,161
definitionDH910559|Mus musculus domesticus DNA, BAC clone: B6Ng01-101F13, 5' end.DH910560|Mus musculus domesticus DNA, BAC clone: B6Ng01-101F13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(23,616,653 - 23,617,670)(23,444,992 - 23,446,158)
sequence
gaattcttagggttataaccaattgttaatgaagatttagaagcaatttc
tttccttttctcttctttctttttgtttttgattttgttttattttgttt
tgttttgagacagggtttctctgtgtagccctggcagttctgggactcat
tctgtagaccataatggcctccaactcacagagatcctcctgcctttgtc
tcctgagtcctgggattaaagatgtacaccaccacacccaaaattagaag
caaattcttattttacagttgttctttgacagtgtagctgttttgctaga
aagaaaactgtttcagcagaaccaacggtctgactttacatgctaatttt
ctattctgaaagtgacatgagaacagatagccattaacactcagatgcag
cagcattgccatcagggcctgatacaggatctcaaagatcaggaaaggtt
catcccattcttgaaaaatgaacagtaaagccacaggccaagaaactaaa
ttttcattctattttgaggtagagatattggttacgagtccagaacatga
ctaagagtgtctaaaagggacacgatctaattaccatcattgctataaaa
agatcatgttcctaggggaaaaacaggatctaggcaggtgtgggaaggcc
acacagagtgaagcacttgctccccagcctctgagtccacttacacagcc
ggtacttcacccttggtgtagaaggtacacctgactttttggctgttggc
aaaggttccttggcataagtctagatgtttggaaagtcaaagtttctctt
caataatactgtttcaggaagtgggaactttcctcttctgtgtcaggtgc
cagaaagtatttgtgatacagattctgtacagtaacgagtctcaaaggca
gccacccttccttgactctggggtcctttaggcacaagtgactttatttg
atagtgacaggatctttttattttcctttaaacagtttatttctattttg
ggtgtggtggtgtctg
gaattcagataagaggtaatccaagctttcagatacaagttgaaataatg
acacaaagtgggaagtagacagttttgtgaggggacttcccaattgtact
gagaatcaggattgtttaacaggattatgaatatatgattgttatatctc
tacacatgatggaaagtacaagcactactgtcattatttttaaatgtttc
atgcttcagagaaggaaaaaatgatttggttctgtgactgtagtcttctc
ttgtgagtaccaatttaataaacaaaaaaaattggtactcaagattcatc
tgaaggtagactgtatccgtactggatgtaaatgaccccatttaatcaaa
aacaaaacaacaaaacaaaacaaaacaaacaaaatggtaagcccatatac
ctgatgccatcaagattctaagtcagcacaagccatagggtgggtgttac
catgttcacagattatctaatattaatgtagccattggaaaactatgtag
ttatgctatgcattatgcattgaccctgatgtcaattatatcattaagca
gattggttatatttgctcagatcaatagcataaggtcttagaattaataa
taatttgagtaaaaatttaacttttacatatctttcacatattatagtaa
ttttgatttatcagcaattatatcagaaaaattatagtttactttttacc
actatctatagatattgttttctgtattaaataaaaatcccactaattaa
aaatcctgttaatttgaagactaataattttaaatttattttacttttaa
aacataatggtattatttaatatatttcaaaaaatatgattagtgaactt
ttcccagtccataaatcactacatttttgaaaagaaaactgatttctatt
aggagtaaaacatgaaaattagacttttgaacttaatttagtatctgttt
agcttgcagaaagttatgaacacatttctagtagcttctattagcaaatc
aaataattgatttactttgttttttaaaaaaaataaggagattatgcagc
attttttggtaactcggacaataatattctagcttccatccctttcctca
gctgtccacaaaggtaccagcacttccaatgttggctctccacttgaaaa
aactcattctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_23616653_23617670
seq2: B6Ng01-101F13.b_45_1060 (reverse)

seq1  CAGACACACACACACACACACAAAATAGAAATAAACTGTTTAAAGGAAAA  50
      |||||||   ||| ||||| ||||||||||||||||||||||||||||||
seq2  CAGACAC---CAC-CACACCCAAAATAGAAATAAACTGTTTAAAGGAAAA  46

seq1  TAAAAAGATCCTGTCACTATCAAATAAAGTCACTTGTGCCT-AAGGACCC  99
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TAAAAAGATCCTGTCACTATCAAATAAAGTCACTTGTGCCTAAAGGACCC  96

seq1  CAGAGTCAAGGAAGGGTGGCTGCCTTTGAGACTCGTTACTGTACAG-ATC  148
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CAGAGTCAAGGAAGGGTGGCTGCCTTTGAGACTCGTTACTGTACAGAATC  146

seq1  TGTATCAC-AATACTTTCTGGCACCTGACACAGAAGAGGAAAGTTCCCAC  197
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TGTATCACAAATACTTTCTGGCACCTGACACAGAAGAGGAAAGTTCCCAC  196

seq1  TTCCTGAAAACAGTATTATTGAAGAGAAACTTTGACCTTCCAAACATCTA  247
      |||||| ||||||||||||||||||||||||||||| |||||||||||||
seq2  TTCCTG-AAACAGTATTATTGAAGAGAAACTTTGACTTTCCAAACATCTA  245

seq1  GACTTATGCCAAGGAACCTTTGCCAACAGCCAAAAAGTCAGGTGTACCTT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTATGCCAAGGAACCTTTGCCAACAGCCAAAAAGTCAGGTGTACCTT  295

seq1  CTACACCAAGGGTGAAGTACCGGCTGTGTAAGTGGACTCAGAGGCTGGGG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACACCAAGGGTGAAGTACCGGCTGTGTAAGTGGACTCAGAGGCTGGGG  345

seq1  AGCAAGTGCTTCACTCTGTGTGGCCTTCCCACACCTGCCTAGATCCTGTT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGTGCTTCACTCTGTGTGGCCTTCCCACACCTGCCTAGATCCTGTT  395

seq1  TTTCCCCTAGGAACATGATCTTTTTATAGCAATGATGGTAATTAGATCGT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCCTAGGAACATGATCTTTTTATAGCAATGATGGTAATTAGATCGT  445

seq1  GTCCCTTTTAGACACTCTTAGTCATGTTCTGGACTCGTAACCAATATCTC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCTTTTAGACACTCTTAGTCATGTTCTGGACTCGTAACCAATATCTC  495

seq1  TACCTCAAAATAGAATGAAAATTTAGTTTCTTGGCCTGTGGCTTTACTGT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCAAAATAGAATGAAAATTTAGTTTCTTGGCCTGTGGCTTTACTGT  545

seq1  TCATTTTTCAAGAATGGGATGAACCTTTCCTGATCTTTGAGATCCTGTAT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTTCAAGAATGGGATGAACCTTTCCTGATCTTTGAGATCCTGTAT  595

seq1  CAGGCCCTGATGGCAATGCTGCTGCATCTGAGTGTTAATGGCTATCTGTT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCCTGATGGCAATGCTGCTGCATCTGAGTGTTAATGGCTATCTGTT  645

seq1  CTCATGTCACTTTCAGAATAGAAAATTAGCATGTAAAGTCAGACCGTTGG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGTCACTTTCAGAATAGAAAATTAGCATGTAAAGTCAGACCGTTGG  695

seq1  TTCTGCTGAAACAGTTTTCTTTCTAGCAAAACAGCTACACTGTCAAAGAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCTGAAACAGTTTTCTTTCTAGCAAAACAGCTACACTGTCAAAGAA  745

seq1  CAACTGTAAAATAAGAATTTGCTTCTAATTTTGGGTGTGGTGGTGTACAT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGTAAAATAAGAATTTGCTTCTAATTTTGGGTGTGGTGGTGTACAT  795

seq1  CTTTAATCCCAGGACTCAGGAGACAAAGGCAGGAGGATCTCTGTGAGTTG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAATCCCAGGACTCAGGAGACAAAGGCAGGAGGATCTCTGTGAGTTG  845

seq1  GAGGCCATTATGGTCTACAGAATGAGTCCCAGAACTGCCAGGGCTACACA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCCATTATGGTCTACAGAATGAGTCCCAGAACTGCCAGGGCTACACA  895

seq1  GAGAAACCCTGTCTCAAAACAAAACAAAATAAAACAAAATCAAAAACAAA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAACCCTGTCTCAAAACAAAACAAAATAAAACAAAATCAAAAACAAA  945

seq1  AAGAAAGAAGAGAAAAGGAAAGAAATTGCTTCTAAATCTTCATTAACAAT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGAAGAGAAAAGGAAAGAAATTGCTTCTAAATCTTCATTAACAAT  995

seq1  TGGTTATAACCCTAAGAATTC  1018
      |||||||||||||||||||||
seq2  TGGTTATAACCCTAAGAATTC  1016

seq1: chr18_23444992_23446158
seq2: B6Ng01-101F13.g_70_1230

seq1  GAATTCAGATAAGAGGTAATCCAAGCTTTCAGATACAAGTTGAAATAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGATAAGAGGTAATCCAAGCTTTCAGATACAAGTTGAAATAATG  50

seq1  ACACAAAGTGGGAAGTAGACAGTTTTGTGAGGGGACTTCCCAATTGTACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAAGTGGGAAGTAGACAGTTTTGTGAGGGGACTTCCCAATTGTACT  100

seq1  GAGAATCAGGATTGTTTAACAGGATTATGAATATATGATTGTTATATCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATCAGGATTGTTTAACAGGATTATGAATATATGATTGTTATATCTC  150

seq1  TACACATGATGGAAAGTACAAGCACTACTGTCATTATTTTTAAATGTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACATGATGGAAAGTACAAGCACTACTGTCATTATTTTTAAATGTTTC  200

seq1  ATGCTTCAGAGAAGGAAAAAATGATTTGGTTCTGTGACTGTAGTCTTCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTCAGAGAAGGAAAAAATGATTTGGTTCTGTGACTGTAGTCTTCTC  250

seq1  TTGTGAGTACCAATTTAATAAACAAAAAAAATTGGTACTCAAGATTCATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGAGTACCAATTTAATAAACAAAAAAAATTGGTACTCAAGATTCATC  300

seq1  TGAAGGTAGACTGTATCCGTACTGGATGTAAATGACCCCATTTAATCAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGTAGACTGTATCCGTACTGGATGTAAATGACCCCATTTAATCAAA  350

seq1  AACAAAACAACAAAACAAAACAAAACAAACAAAATGGTAAGCCCATATAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAACAACAAAACAAAACAAAACAAACAAAATGGTAAGCCCATATAC  400

seq1  CTGATGCCATCAAGATTCTAAGTCAGCACAAGCCATAGGGTGGGTGTTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATGCCATCAAGATTCTAAGTCAGCACAAGCCATAGGGTGGGTGTTAC  450

seq1  CATGTTCACAGATTATCTAATATTAATGTAGCCATTGGAAAACTATGTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTCACAGATTATCTAATATTAATGTAGCCATTGGAAAACTATGTAG  500

seq1  TTATGCTATGCATTATGCATTGACCCTGATGTCAATTATATCATTAAGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGCTATGCATTATGCATTGACCCTGATGTCAATTATATCATTAAGCA  550

seq1  GATTGGTTATATTTGCTCAGATCAATAGCATAAGGTCTTAGAATTAATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGGTTATATTTGCTCAGATCAATAGCATAAGGTCTTAGAATTAATAA  600

seq1  TAATTTGAGTAAAAATTTAACTTTTACATATCTTTCACATATTATAGTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTGAGTAAAAATTTAACTTTTACATATCTTTCACATATTATAGTAA  650

seq1  TTTTGATTTATCAGCAATTATATCAGAAAAATTATAGTTTACTTTTTACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGATTTATCAGCAATTATATCAGAAAAATTATAGTTTACTTTTTACC  700

seq1  ACTATCTATAGATATTGTTTTCTGTATTAAATAAAAATCCCACTAATTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATCTATAGATATTGTTTTCTGTATTAAATAAAAATCCCACTAATTAA  750

seq1  AAATCCTGTTAATTTGAAGACTAATAATTTTAAATTTATTTTACTTTTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCTGTTAATTTGAAGACTAATAATTTTAAATTTATTTTACTTTTAA  800

seq1  AACATAATGGTATTATTTAATATATTTC-AAAAATATGATTAGTGAACTT  849
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  AACATAATGGTATTATTTAATATATTTCAAAAAATATGATTAGTGAACTT  850

seq1  TTCCCAGTCCAT-AATCACTACA-TTTTGAAAAGAAAACTGA-TTCTATT  896
      |||||||||||| |||||||||| |||||||||||||||||| |||||||
seq2  TTCCCAGTCCATAAATCACTACATTTTTGAAAAGAAAACTGATTTCTATT  900

seq1  AGGAGTAAAACATGAAAATTAGACTTTTGAAC-TAATTTAGTATCTGTTT  945
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AGGAGTAAAACATGAAAATTAGACTTTTGAACTTAATTTAGTATCTGTTT  950

seq1  AAGCTGCAGAAAGATATGAACACATTTCTAGTAGCTTCTATAAGCAAAAT  995
      |   ||||||||| ||||||||||||||||||||||||||| ||| ||||
seq2  AGCTTGCAGAAAGTTATGAACACATTTCTAGTAGCTTCTATTAGC-AAAT  999

seq1  CCAAAATAATTGATTTTACTTTGTTTTTTAAAAAAAATTAGGTAGATTAT  1045
      |  |||||||||| |||||||||||||||||||||||| ||| |||||||
seq2  C--AAATAATTGA-TTTACTTTGTTTTTTAAAAAAAATAAGG-AGATTAT  1045

seq1  GCAGCATTTTCTTGGTAAACTCGGACAATTATAATGCTAAGCTTCCCATC  1095
      |||||||||| ||||| |||||||||||| || || || ||||| |||||
seq2  GCAGCATTTT-TTGGT-AACTCGGACAATAAT-ATTCT-AGCTT-CCATC  1090

seq1  CCTTTCCTCAGCTGT-CACCAAGGGACACAGCACTTTCTCATGTTGGC-C  1143
      ||||||||||||||| ||| |||| || |||||| |||  |||||||| |
seq2  CCTTTCCTCAGCTGTCCACAAAGGTAC-CAGCAC-TTCCAATGTTGGCTC  1138

seq1  TCCACCTGAGAAAACTCCATTCTC  1167
      ||||| ||| |||||| |||||||
seq2  TCCACTTGAAAAAACT-CATTCTC  1161