BAC Information

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BAC

Clone NameB6Ng01-105O01
Chromosome18 (Build37)
Map Location 32,452,273 - 32,453,555
singlet/doubletsinglet
Overlap genenone
Upstream geneRit2, EG666130, Syt4, LOC383420, Slc25a46, Sap130, LOC640549, Ammecr1l, Polr2d, EG626327, Wdr33, Sft2d3, Lims2, Gpr17, Myo7b, Iws1, Proc, LOC546710, Map3k2, Ercc3
Downstream geneBin1, Gypc, LOC100041160, LOC100041170, Tslp, Wdr36, Camk4, Stard4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-105O01.bB6Ng01-105O01.g
ACCDH913780DH913781
length9721,027
definitionDH913780|Mus musculus domesticus DNA, BAC clone: B6Ng01-105O01, 5' end.DH913781|Mus musculus domesticus DNA, BAC clone: B6Ng01-105O01, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagttttctttaaggggctggccactgggagtttgactatgctcc
actgagtatatgggcaacacaaattggacacctcttccatctcttcttct
tcctcctcttcttttgggtggggggcagtcacaagggtagtgggacagat
ctgggaggactgggaagtgtgatcagggttcatgatgtgaaattcccaaa
tacacatattaggtactttaaaaaaaaaatctgaggctggtccccagcat
cttcatcctctatcaaactgcaccctctgagcagcaccaccagctggggt
ctaagtgttcaaacctgtgaaccttcatgggatatttaaattcaaaccac
aagagaagaaagcctcccatctttttcccctccatttttctttttagctg
attcacatgcgagggaatggttttccggatgtaggaggaactgattaccc
ggatgtagaagacaagtcctcaggaacttgattcttttcatgggtgagcc
aggaagtggggaatgtgcagttcagttttaaatccttttcattcactggc
aacttaggagccttgcaagtactcaggaagtctctatttcctgacaggaa
ctcactgcctactttaaggttcagtgtagcctgtcatcaaagaaatgcta
attcttgcatggagtagactgctgggtgacctcactgaatgctgatgatt
gatgtctggtctttctcaaagaagtaacagtggatgtggtgatctggctg
caacatctgcaagcccattaattgcctgtgttgattcagctgaactggct
ggctgggtgggcatcccctttctcccttccttgctccgtgtctatccctc
ctccagcagagcactaggtgtcccacacagaaaggctggtcttcagtcaa
aggcatcttagctgatctgccgtagtggaaccttcaacatgctgccaaag
caatggggggggtggattggtg
gaattctgtggactgtatcttgtgtactctgaatgggtttttttcttttt
ttaatatccacttattagtgactacatactatgcatgtccttttgggcct
tagttaccacactcagatgatattttctagttccatccatttgcctgcaa
aactcaggatgtcctctttcttaagagctgagtagcattccattgtgtaa
atgaaccacattttctgtatccattcttctgtcatgggacatctaggttg
tttccagcttctggctatcacaaataaggctgctataaacatagtggtac
aggtgcccctgtggcattgtgggagcatcttttgggtatattcccaagag
tggtatagctgggtcttcaggtagatctatttccaagttactgaggaacg
tccagattgatttccagagtggttgtaccagtttgcaatcccaccagcaa
tggaggagtgttcctctttctccacatcctctccaacatgtgttgtcacc
tgaggttttgatcttagccattctgactggtgtgaggtggaatctcaggg
tcattttgatttgcatttctctgattactaaggactttgaacatttcttt
aggtgtttctcagccattcaagattcctcagttgtgaattctcagtttta
gttctattccccattttttaaattgggttgtttggttttttggtgattaa
cttcttgagttctttatatattttggccctctatcagatgtggagttagt
gaagttttttttttttttttcctatcagtatgttgccaatttgtcttctt
gactatgccctttgccttacagaagctttccagttttatggggtcccatt
tatcaattcttgattttagagcatgagacattggagttctgttcaggaaa
tttccccctgtgccatgacgtcaggatctttccacttactctctatacta
attttaaaataataaaaaagaagaatgtataaattcagtgacctaaatgt
gaggtcttgatctcatggactgtgctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_32452273_32453555
seq2: B6Ng01-105O01.b_48_1019

seq1  GAATTCAGTTTTCTTTAAGGGGCTGGCCACTGGGAGTTTGACTATGCTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTTTCTTTAAGGGGCTGGCCACTGGGAGTTTGACTATGCTCC  50

seq1  ACTGAGTATATGGGCAACACAAATTGGACACCTCTTCCATCTCTTCTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGTATATGGGCAACACAAATTGGACACCTCTTCCATCTCTTCTTCT  100

seq1  TCCTCCTCTTCTTTTGGGTGGGGGGCAGTCACAAGGGTAGTGGGACAGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCTCTTCTTTTGGGTGGGGGGCAGTCACAAGGGTAGTGGGACAGAT  150

seq1  CTGGGAGGACTGGGAAGTGTGATCAGGGTTCATGATGTGAAATTCCCAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAGGACTGGGAAGTGTGATCAGGGTTCATGATGTGAAATTCCCAAA  200

seq1  TACACATATTAGGTACTTTAAAAAAAAAATCTGAGGCTGGTCCCCAGCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACATATTAGGTACTTTAAAAAAAAAATCTGAGGCTGGTCCCCAGCAT  250

seq1  CTTCATCCTCTATCAAACTGCACCCTCTGAGCAGCACCACCAGCTGGGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATCCTCTATCAAACTGCACCCTCTGAGCAGCACCACCAGCTGGGGT  300

seq1  CTAAGTGTTCAAACCTGTGAACCTTCATGGGATATTTAAATTCAAACCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGTGTTCAAACCTGTGAACCTTCATGGGATATTTAAATTCAAACCAC  350

seq1  AAGAGAAGAAAGCCTCCCATCTTTTTCCCCTCCATTTTTCTTTTTAGCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAAGAAAGCCTCCCATCTTTTTCCCCTCCATTTTTCTTTTTAGCTG  400

seq1  ATTCACATGCGAGGGAATGGTTTTCCGGATGTAGGAGGAACTGATTACCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACATGCGAGGGAATGGTTTTCCGGATGTAGGAGGAACTGATTACCC  450

seq1  GGATGTAGAAGACAAGTCCTCAGGAACTTGATTCTTTTCATGGGTGAGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTAGAAGACAAGTCCTCAGGAACTTGATTCTTTTCATGGGTGAGCC  500

seq1  AGGAAGTGGGGAATGTGCAGTTCAGTTTTAAATCCTTTTCATTCACTGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGTGGGGAATGTGCAGTTCAGTTTTAAATCCTTTTCATTCACTGGC  550

seq1  AACTTAGGAGCCTTGCAAGTACTCAGGAAGTCTCTATTTCCTGACAGGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTAGGAGCCTTGCAAGTACTCAGGAAGTCTCTATTTCCTGACAGGAA  600

seq1  CTCACTGCCTACTTTAAGGTTCAGTGTAGCCTGTCATCAAAGAAATGCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTGCCTACTTTAAGGTTCAGTGTAGCCTGTCATCAAAGAAATGCTA  650

seq1  ATTCTTGCATGGAGTAGACTGCTGGGTGACCTCACTGAATGCTGATGATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTGCATGGAGTAGACTGCTGGGTGACCTCACTGAATGCTGATGATT  700

seq1  GATGTCTGGTCTTTCTCAAAGAAGTAACAGTGGATGTGGTGATCTGGCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTCTGGTCTTTCTCAAAGAAGTAACAGTGGATGTGGTGATCTGGCTG  750

seq1  CAACATCTGCAAGCCCATTAATTGCCTGTGTTGATTCAGCTGAACTGGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATCTGCAAGCCCATTAATTGCCTGTGTTGATTCAGCTGAACTGGCT  800

seq1  GGCTGGGTGGGCATCCCCTTTCT-CCTTCCTTGCTCCGTGTCTATCCCTC  849
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GGCTGGGTGGGCATCCCCTTTCTCCCTTCCTTGCTCCGTGTCTATCCCTC  850

seq1  CTCCAGCAGAGCACTAGGTGTCCCACACAGAAAGGCTGGCCTTCAGTCAA  899
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CTCCAGCAGAGCACTAGGTGTCCCACACAGAAAGGCTGGTCTTCAGTCAA  900

seq1  AGGCATCTTAGCTGATCTGCCGTAGTGGAACCTTCAAACATGCTGCCAAA  949
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AGGCATCTTAGCTGATCTGCCGTAGTGGAACCTTC-AACATGCTGCCAAA  949

seq1  GCAATGGGGGGGGTGGGATGGGGGGGGCGTGGTAGTGGGGAGTCAGGCAG  999
      ||||||||||||||||  ||| |                           
seq2  GCAATGGGGGGGGTGGATTGGTG---------------------------  972

seq1  ACAGTCATCTTACGTTCTGGTCCATCTCTGTATGATACCACTGGCTTTGG  1049
                                                        
seq2  --------------------------------------------------  972

seq1  AGAACAATTCCAAACCAGGTATTGGAACCTATGAAAACGAAAGACCTCAG  1099
                                                        
seq2  --------------------------------------------------  972

seq1  TGGGAGACCCCCACTCACAAGTCCCGAGATGGCGCGCACATCCAAGGAAT  1149
                                                        
seq2  --------------------------------------------------  972

seq1  CACGAGAGAGAGATCGTCTTGATGTAAACACATGAGGTACTTTAATGACA  1199
                                                        
seq2  --------------------------------------------------  972

seq1  CGCAGGAGACAGAGGACTCGACCATGAGGCTCAGAAGCTAGGGGTTTATA  1249
                                                        
seq2  --------------------------------------------------  972

seq1  TACAAAAAAGTTGGGGGCAGGGGAAGAATTGGTG  1283
                                        
seq2  ----------------------------------  972