BAC Information

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BAC

Clone NameB6Ng01-112O14
Chromosome18 (Build37)
Map Location 27,850,248 - 27,851,312
singlet/doubletsinglet
Overlap genenone
Upstream geneEG665977, EG665646
Downstream geneEG271505, EG625997
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-112O14.bB6Ng01-112O14.g
ACCDH918844DH918845
length8121,053
definitionDH918844|Mus musculus domesticus DNA, BAC clone: B6Ng01-112O14, 5' end.DH918845|Mus musculus domesticus DNA, BAC clone: B6Ng01-112O14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaggtccatacctaaacataatcatagtaatctacaggaaaccag
tagctaacatcaaataaatggagagaagctagaagcaatcccactaatat
tagggactagacaatgctgcccactttctccctaccaattcaatatacta
cttgaagtcctagagcaattcaacaacaaaagaggtcaaggggatagaag
ttggagaggaagaagtcaaaatatcactatttacagatatgatagtatat
atgtgaccctaaaaaatccaccagagaactcaaacctattaaactgcttc
agtgcagtagctggatataaaattaattcaaacaaatcagtggcctttca
ctacacaaaggaaaaacaggctgagaaaaaattagcgaaacaacaccttt
cacaacagtcacaaataatataaaataccttcctgtgattcaaactaagg
aagtgaaagatctgtatgataagaacttcaagtctctgaagaaagaagtc
aaggaaaatctcagaagattgaaagatctcccatgatcatagattggcag
agtcaatataatgaaaatggctatcttgccaaaagcaatctacagattca
atgcaatacccatcaaaattccaactcaattcttcatggagttagaaagg
gcaatttgcaaattcatctggaaataacaaaaaacctatgatagcaaaac
tctttctcaaggataaaaagaatctctaatggaaatcaccatgccctgac
ctaaagctgtactacagagcaatttgtgaaaaaaactgcatgggtactgg
tatattgacaag

gaattcttgttccatctaccctcaatgatgggccagtacctgcgcttatt
gatgaaaaaatcctttcctctccaagttatttgtgaccacagtgtttatc
acagcaatagaaacctaactcggaaaccaaggaatacacatttatggttg
agaagttatagttacctctaggcttgttttacacactttttttttgccac
cacggcacctcaaaggacgagttacctgtatcacaatgagaacatgaaag
acagggtataaatttgttgtgtgtagggaagtgaagagtattgaagagga
gttagataaagggaaatatgatcaaagatactgtattaaaatatattttc
aattaagataggaaccttaatttacatttgctttaagcccctttggagcc
ccttgcatagggaatgactagattttcactgtcacctctaccaacagact
gcaggatgtcttagttcatgtggcatacagatacatggaagaatgtaaca
tcactcaatgcatataaggataaataaatgttttaaacagtgaaaaacat
caatgtagcctttataaatggttatatacataacaatttatgtgttcatg
tatatatatgtccattaatatataaatatatgcatatagtcatatatata
tatactcacactcaaatatacacatatatttgttcaggcatcaaggctgc
cctggtgagggttgtcagaaacttgaaaaccacagaactctcttaccctt
aaaaacacattccaagtttctattggatgacaccaacttcttctcatcat
cagtgttttctccctaaatcagtttcaaatgtaataaatacttaacactt
caagctttaaatgctatgagtttatgtccagaaaatacgcttataaaata
tttgggtaaatccttaaacacagacttgctagattactactttagtttta
aaacatcacaatacaactgaataataggatctcccatctgatgtgagacc
aacatacactctcctctgacccggggtccaaggagagcattttctcagaa
gtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_27850248_27851312
seq2: B6Ng01-112O14.g_68_1120 (reverse)

seq1  AACTTCTGAGAAAATGCTCTTCCTTTTGACCACTGTGGTCAGAGGAGAGT  50
      ||||||||||||||||||||  | || |||| |   ||||||||||||||
seq2  AACTTCTGAGAAAATGCTCT--CCTTGGACCCC--GGGTCAGAGGAGAGT  46

seq1  GTATGTGTGTCTCTACATCAGATGTGGAGATACACATATCTAGGTCTATT  100
      ||||||  ||||| |||||||||| |||||| |   |||  || | ||||
seq2  GTATGTTGGTCTC-ACATCAGATG-GGAGATCCTATTATTCAGTTGTATT  94

seq1  GAGGATGTTTTAAAAACTAAAAGTAGTAATCTAGCAAGTCTGTGTTTTAA  150
      |  |||||||| |||||| ||||||||||||||||||||||||||||  |
seq2  G-TGATGTTTT-AAAACT-AAAGTAGTAATCTAGCAAGTCTGTGTTT--A  139

seq1  AGAATTTAACCAAATATTTAATAAGCCTATTTTCTGGACATAAACTCATA  200
      || ||||| |||||||||| |||||| |||||||||||||||||||||||
seq2  AGGATTTACCCAAATATTTTATAAGCGTATTTTCTGGACATAAACTCATA  189

seq1  GCATTTAAAGCTTGAAGTGTTAAGTATTTATTACATTTGAAAACTGATTT  250
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GCATTTAAAGCTTGAAGTGTTAAGTATTTATTACATTTG-AAACTGATTT  238

seq1  AGGGAGAAAACACTGATGATGAGAAGAAGTTGGTGTCATCCAATAGAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGAAAACACTGATGATGAGAAGAAGTTGGTGTCATCCAATAGAAAC  288

seq1  TTGGAATGTGTTTTTAAGGGTAAGAGAGTTCTGTGGTTTTCAAGTTTCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAATGTGTTTTTAAGGGTAAGAGAGTTCTGTGGTTTTCAAGTTTCTG  338

seq1  ACAACCCTCACCAGGGCAGCCTTGATGCCTGAACAAATATATGTGTATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACCCTCACCAGGGCAGCCTTGATGCCTGAACAAATATATGTGTATAT  388

seq1  TTGAGTGTGAGTATATATATATATGACTATATGCATATATTTATATATTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTGTGAGTATATATATATATGACTATATGCATATATTTATATATTA  438

seq1  ATGGACATATATATACATGAACACATAAATTGTTATGTATATAACCATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGACATATATATACATGAACACATAAATTGTTATGTATATAACCATTT  488

seq1  ATAAAGGCTACATTGATGTTTTTCACTGTTTAAAACATTTATTTATCCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGGCTACATTGATGTTTTTCACTGTTTAAAACATTTATTTATCCTT  538

seq1  ATATGCATTGAGTGATGTTACATTCTTCCATGTATCTGTATGCCACATGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCATTGAGTGATGTTACATTCTTCCATGTATCTGTATGCCACATGA  588

seq1  ACTAAGACATCCTGCAGTCTGTTGGTAGAGGTGACAGTGAAAATCTAGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGACATCCTGCAGTCTGTTGGTAGAGGTGACAGTGAAAATCTAGTC  638

seq1  ATTCCCTATGCAAGGGGCTCCAAAGGGGCTTAAAGCAAATGTAAATTAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCTATGCAAGGGGCTCCAAAGGGGCTTAAAGCAAATGTAAATTAAG  688

seq1  GTTCCTATCTTAATTGAAAATATATTTTAATACAGTATCTTTGATCATAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCTATCTTAATTGAAAATATATTTTAATACAGTATCTTTGATCATAT  738

seq1  TTCCCTTTATCTAACTCCTCTTCAATACTCTTCACTTCCCTACACACAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTTTATCTAACTCCTCTTCAATACTCTTCACTTCCCTACACACAAC  788

seq1  AAATTTATACCCTGTCTTTCATGTTCTCATTGTGATACAGGTAACTCGTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTATACCCTGTCTTTCATGTTCTCATTGTGATACAGGTAACTCGTC  838

seq1  CTTTGAGGTGCCGTGGTGGCAAAAAAAAAGTGTGTAAAACAAGCCTAGAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAGGTGCCGTGGTGGCAAAAAAAAAGTGTGTAAAACAAGCCTAGAG  888

seq1  GTAACTATAACTTCTCAACCATAAATGTGTATTCCTTGGTTTCCGAGTTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACTATAACTTCTCAACCATAAATGTGTATTCCTTGGTTTCCGAGTTA  938

seq1  GGTTTCTATTGCTGTGATAAACACTGTGGTCACAAATAACTTGGAGAGGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTCTATTGCTGTGATAAACACTGTGGTCACAAATAACTTGGAGAGGA  988

seq1  AAGGATTTTTTCATCAATAAGCGCAGGTACTGGCCCATCATTGAGGGTAG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATTTTTTCATCAATAAGCGCAGGTACTGGCCCATCATTGAGGGTAG  1038

seq1  ATGGAACAAGAATTC  1065
      |||||||||||||||
seq2  ATGGAACAAGAATTC  1053


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