BAC Information

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BAC

Clone NameB6Ng01-114K24
Chromosome18 (Build37)
Map Location 32,365,209 - 32,366,229
singlet/doubletsinglet
Overlap geneMap3k2
Upstream geneRit2, EG666130, Syt4, LOC383420, Slc25a46, Sap130, LOC640549, Ammecr1l, Polr2d, EG626327, Wdr33, Sft2d3, Lims2, Gpr17, Myo7b, Iws1, Proc, LOC546710
Downstream geneErcc3, Bin1, Gypc, LOC100041160, LOC100041170, Tslp, Wdr36, Camk4, Stard4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-114K24.bB6Ng01-114K24.g
ACCDH920147DH920148
length1,0371,043
definitionDH920147|Mus musculus domesticus DNA, BAC clone: B6Ng01-114K24, 5' end.DH920148|Mus musculus domesticus DNA, BAC clone: B6Ng01-114K24, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaactttgactgtcctctcggtatgagaccagtaattttctcct
tgcctttagacggtgggctgaaagccataaccggcgtacttgtagacaga
gctcttctccaactggaggcacagctgctagccttctttggggaagtaaa
gtaaaacagcccctacattccagttgttagacagggaaagcttacgtgca
ctagttaaattgccctttgatttcctcaatattaacccactagtaagtat
tcttgttgtttgactttggtaccaggataagggaaaaactgaaaatggta
cagaattactgagtgtgttaacatgcccattaaatgaatattaagaaata
tgagttatataattggatggagaaacttttatagtttccttctttctcag
tctccttttagttgcgtgtataattttaaaaaatgctctataattttaaa
aaagtatgcaaaaagatgaaaatatcatggattcagtaatgacagtggct
gtaggtgttacaaagcctgcatgagctccactcacagcttatcacacacc
tctttgcagactgcatatgagatctctgcacctacttaatagatcccttg
ctccttctccctacttaacaggtgacccctttacatgtgcttatttcttt
ttcaaatttaaacttgaatctaagaacatttatatgtttgtgtactttaa
aaattactgcaaggaaagctaacaacttaattaataaacgttgtgaacca
ggcatttaaataactgccaggcctcccctctattttttcttaaactatga
agattctaagggtttatagtatatagtacatctttatatataggtctagc
taatctgggactatctgtatagagcatgctggatttgaacttagagatct
gctcaacctttgcctctgagagctggattaaacgatgtatgctactacga
ctggataagtatcaagagattcaggttatatgaatatcgctcactacaaa
agcctgagggtcttagttggtaggtcgcttgtttgtt
gaattcaccactcttagagatatatccaaatgatcctttatcatgctaca
gagacactcgctcaaccgtattcatctctgctctattcacagaagccaga
aacagttgaatggataagaaaaatgtggtagatttacacaatactctatt
acttagctgttacaaaaaacacaggtaaatggatggagctagaaagaaaa
aaatcatctgagagaagtaacccagatccaaacggacaaatatagtaggc
attcacttgtatgtgggcaccagctgttctgtcttcaataagcaggctac
atccacataaccactgagattcgttatagaatacgggactaggggagagg
aatggagccctcccttggaaggggaagcataacagacagttataagtgag
tggggatggggaactgaaatgggaagatcaaatggggaggtggaggaatc
catccatttgcctacaaaactcatgatgccttccttcttaatagctgaat
agtgttctattttataaatgaacaaaattttctgtatccattcttcagtt
gagggacatctgagttgtttccagcttctggctattacagataaggccac
tatgaacatagtggaacatgtgcccccgtggcatggtggatcatcttttg
cgtatatgccaagaatggtatagctgggtcttcaggtagatctatttcca
attttccaaggaacctgcagatcagtttccaaagtggttgtaccagttta
caatcctaccagcaattgaggagtgttcctctttctccacatcctcacca
gcatgtgttgtcatttgagtttttgatcttagccattctgattgatgtaa
ggggaaatctcaggattgtttttatttgcatttcgcttatgactaaggaa
cacttcttgaagtgcttcttcagcactcagattctctgttatgagctctc
tggttaagctctgcaacaacagttttgtaatggggtcatttggattattt
tggttttgtttggattttggctttggtttttttgaagctgagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_32365209_32366229
seq2: B6Ng01-114K24.b_40_1076

seq1  GAATTCAAACTTTCACTGTCACTCTCGGTATGAGACCAGTAATTTTCTCC  50
      ||||||||||||| |||||| |||||||||||||||||||||||||||||
seq2  GAATTCAAACTTTGACTGTC-CTCTCGGTATGAGACCAGTAATTTTCTCC  49

seq1  TTGCCTTTAGACAGTGGGCTGAAAGCCATAACCAGCGTACTTGTAGACAG  100
      |||||||||||| |||||||||||||||||||| ||||||||||||||||
seq2  TTGCCTTTAGACGGTGGGCTGAAAGCCATAACCGGCGTACTTGTAGACAG  99

seq1  AGCTCTTCTCCAACTGGAGGCACAGCTGCTAGCCTTCTTTGTGGAAGTAA  150
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AGCTCTTCTCCAACTGGAGGCACAGCTGCTAGCCTTCTTTGGGGAAGTAA  149

seq1  AGTAAAACAGCCCCTACATTCCAGTTGTTAGACAGGGAAAGCTTACGTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAAACAGCCCCTACATTCCAGTTGTTAGACAGGGAAAGCTTACGTGC  199

seq1  ACTAGTTAAATTGCCCTTTGATTTCCTCAATATTAACCCACTAGTAAGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGTTAAATTGCCCTTTGATTTCCTCAATATTAACCCACTAGTAAGTA  249

seq1  TTCTTGTTGTTTGACTTTGGTACCAGGATAAGGGAAAAACTGAAAATGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGTTGTTTGACTTTGGTACCAGGATAAGGGAAAAACTGAAAATGGT  299

seq1  ACAGAATTACTGAGTGTGTTAACATGCCCATTAAATGAATATTAAGAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAATTACTGAGTGTGTTAACATGCCCATTAAATGAATATTAAGAAAT  349

seq1  ATGAGTTATATAATTGGATGGAGAAACTTTTATAGTTTCCTTCTTTCTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTTATATAATTGGATGGAGAAACTTTTATAGTTTCCTTCTTTCTCA  399

seq1  GTCTCCTTTTAGTTGCGTGTATAATTTTAAAAAATGCTCTATAATTTTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCCTTTTAGTTGCGTGTATAATTTTAAAAAATGCTCTATAATTTTAA  449

seq1  AAAAGTATGCAGAAAGATGAAAATATCAGGGATTCAGTAATGACAGTGGC  500
      ||||||||||| |||||||||||||||| |||||||||||||||||||||
seq2  AAAAGTATGCAAAAAGATGAAAATATCATGGATTCAGTAATGACAGTGGC  499

seq1  TGTAGGTGTTACAAAGCCTGCATGAGCTCCACTCAAAGCTTAGCACACAC  550
      ||||||||||||||||||||||||||||||||||| |||||| |||||||
seq2  TGTAGGTGTTACAAAGCCTGCATGAGCTCCACTCACAGCTTATCACACAC  549

seq1  CTCTTTGCAGACAGCAGATGAGATCTCTGCACCTACTTAATAGATCCCTT  600
      |||||||||||| ||| |||||||||||||||||||||||||||||||||
seq2  CTCTTTGCAGACTGCATATGAGATCTCTGCACCTACTTAATAGATCCCTT  599

seq1  GCTCCTTCTCCCTACTTAACAGGTGACCCCTTTACATGTGCTTATTTCTT  650
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GCTCCTTCTCCCTACTTAACAGGTGACCCCTTTACATGTGCTTATTTC-T  648

seq1  TTTTTAAATTTAAACTTAAATAGAAGAACATTTATATGTTTGTGTACTTT  700
      |||| |||||||||||| |||  |||||||||||||||||||||||||||
seq2  TTTTCAAATTTAAACTTGAATCTAAGAACATTTATATGTTTGTGTACTTT  698

seq1  AAAAATTACTGCAAGGAAAGCCAACAACTTAGTTAATAAACTTTGTGAAC  750
      ||||||||||||||||||||| ||||||||| ||||||||| ||||||||
seq2  AAAAATTACTGCAAGGAAAGCTAACAACTTAATTAATAAACGTTGTGAAC  748

seq1  CAGGTAATTAAATAACTGCCAGG-CTCCCCTCTATTTTTTCTTAAACTAT  799
      |||| | |||||||||||||||| ||||||||||||||||||||||||||
seq2  CAGGCATTTAAATAACTGCCAGGCCTCCCCTCTATTTTTTCTTAAACTAT  798

seq1  GAAGATTCTAGGGGTTTATAGTATATAGTATATCTTTATATATAGGCCTA  849
      |||||||||| ||||||||||||||||||| ||||||||||||||| |||
seq2  GAAGATTCTAAGGGTTTATAGTATATAGTACATCTTTATATATAGGTCTA  848

seq1  GCTAATCTGGGACTATCTATATAGACCAGGCTGGATTTGAACTTAGAGAT  899
      |||||||||||||||||| |||||| || |||||||||||||||||||||
seq2  GCTAATCTGGGACTATCTGTATAGAGCATGCTGGATTTGAACTTAGAGAT  898

seq1  CTGC-CAACCTTTGCCTCCTGAGTGCTGGAATTAAAGATGTATGCTAATA  948
      |||| |||||||||||| ||||| |||||| | || ||||||||||| ||
seq2  CTGCTCAACCTTTGCCT-CTGAGAGCTGGATTAAACGATGTATGCTACTA  947

seq1  CAACTGGAAAAGTATGAAGAGATTTAAGTAAAAAGAATATAGCTTACTAC  998
      | |||||| |||||| |||||||| | || | | |||||| ||| |||||
seq2  CGACTGGATAAGTATCAAGAGATTCAGGTTATATGAATATCGCTCACTAC  997

seq1  AAAAGCCT-AGGGTTTTGTTTGTT----------------  1021
      |||||||| ||||| ||  ||| |                
seq2  AAAAGCCTGAGGGTCTTAGTTGGTAGGTCGCTTGTTTGTT  1037