BAC Information

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BAC

Clone NameB6Ng01-114P01
Chromosome18 (Build37)
Map Location 23,520,413 - 23,630,046
singlet/doubletdoublet
Overlap geneDtna
Upstream geneLOC100040547, Asxl3, Nol4, LOC100040579, LOC665797
Downstream geneMapre2, EG665813, LOC100040623, Zfp397, C230097I24Rik, Zfp35, Zfp191, D030070L09Rik, Galnt1, LOC665586, 2700062C07Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-114P01.bB6Ng01-114P01.g
ACCDH920332DH920333
length8511,024
definitionDH920332|Mus musculus domesticus DNA, BAC clone: B6Ng01-114P01, 5' end.DH920333|Mus musculus domesticus DNA, BAC clone: B6Ng01-114P01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(23,629,196 - 23,630,046)(23,520,413 - 23,521,450)
sequence
gaattctttattactctcttcttgcccttctgggactcgtcctttagcct
ggaagccagcaagccccagtggtcctcctttcatttacagggaaacccag
cttgttatgcaggtgttgagatctgggctctggtcctcatgattgcagag
caagttatcataactgctgagtcgtctctctagcctctcttgcttttaag
gaaagcacaagcataaaactaatggaagtctcgtttgttcactaagtatc
agatttatgtatcttaaatttccttatgattaaaatcttttacgaagggc
aatgtgaaactagagctgtgtgccagcaaaagctccccatagtgaggaac
tcattagatcttgaaacacccctatgctgaaattaattcccagcaaagag
aaaagattaatacactttatcttgagtaggaaaaaaaaatatccaactca
gccttttgtctcttgccactcagtactactcaaattgatccaaagaaaat
gaagttggattgtgaacattaagaaccagtgtgtcaaagattagtctaat
taattttttagaagacattttttttaattagccacatacaggcacaacac
agattctattgaaagctcctggtaaaagatgaccttcaaatcttgctcat
agtttatgtctttcatttgacagagaagtccacaacatacttctaagaga
ttagtgctgcaatttgacctagcataactatgttttgattttattattgt
gcaactgtcaaaacaattagaaaccaaggaagaaagaaagaaggaaggaa
ggaaggaaggaaggaaggaaggaagaaaggaaggaaggggtgtagggaag
t
gattgccatacaatgaaatgaaagttgtgctaaattgatattgaaaagat
agccacagataatttctcctaatagctctagaatcccgatcttcttcttc
ctcttacttcccacccccacttcaaaaggcccttgaagagtcaaattgag
ccctcttgcaatatcacatcatggtaaaggccacaaaagtactgaccaag
cttcccttgggtgttgggagtggtttctgagagtatagataagagatgag
ttgtggcttctgtcttctggatgctcatctctgacaagatggacacttgt
cataaaatgacacaagagtgtcactccacagaagcagagtggccataaga
gatgtcttcctcagtctctccatttataagcatgctttttatcaaactca
catttttaaagcaaacaaattggacatacatatttgcgtgtgtttacttt
ctataacctgctgaacccagccttttaacaaacataacagtgtatataaa
ctcactgtaggcagaaatcgttatccagagaagaaaatggttgcatatac
taagagaaaccagaaaaggggataacatttgaaatctaaataaagaaaat
atccaaccttttttaaaagtagttgaacaaattatcacactccaaaataa
ctaaccctatttatgatgctagttagaattattattttaaggaaaaaaca
gagaccatgtagttttgtgactactgtttatcttaagtgacactacagtg
tacacatcacttataagagccaaataaatagcagtaggcaggaggcaatg
ttaaaaaatccaattgatgaattctgaaaaatcaatcaggagatagagtt
aagtgtttttgttgttgttgtgtttgttttgtttttggtggtccctaaac
accactgactgagggagatataagcagttcatgggtagaatactctgatg
ggatcacatattcaaagtgaagaagcatgcaccagaatagatgttttcca
agggatgtcagaattctcaatagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_23629196_23630046
seq2: B6Ng01-114P01.b_45_895 (reverse)

seq1  ACTTCCCTACACCCCTTCCTTCCTTTCTTCCTTCCTTCCTTCCTTCCTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCCTACACCCCTTCCTTCCTTTCTTCCTTCCTTCCTTCCTTCCTTC  50

seq1  CTTCCTTCCTTCCTTCTTTCTTCCTTGGTTTCTAATTGTTTTGACAGTTG  100
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CTTCCTTCCTTCTTTCTTTCTTCCTTGGTTTCTAATTGTTTTGACAGTTG  100

seq1  CACAATAATAAAATCAAAACATAGTTATGCTAGGTCAAATTGCAGCACTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATAATAAAATCAAAACATAGTTATGCTAGGTCAAATTGCAGCACTA  150

seq1  ATCTCTTAGAAGTATGTTGTGGACTTCTCTGTCAAATGAAAGACATAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTTAGAAGTATGTTGTGGACTTCTCTGTCAAATGAAAGACATAAAC  200

seq1  TATGAGCAAGATTTGAAGGTCATCTTTTACCAGGAGCTTTCAATAGAATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGCAAGATTTGAAGGTCATCTTTTACCAGGAGCTTTCAATAGAATC  250

seq1  TGTGTTGTGCCTGTATGTGGCTAATTAAAAAAAATGTCTTCTAAAAAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTGTGCCTGTATGTGGCTAATTAAAAAAAATGTCTTCTAAAAAATT  300

seq1  AATTAGACTAATCTTTGACACACTGGTTCTTAATGTTCACAATCCAACTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGACTAATCTTTGACACACTGGTTCTTAATGTTCACAATCCAACTT  350

seq1  CATTTTCTTTGGATCAATTTGAGTAGTACTGAGTGGCAAGAGACAAAAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTCTTTGGATCAATTTGAGTAGTACTGAGTGGCAAGAGACAAAAGG  400

seq1  CTGAGTTGGATATTTTTTTTTCCTACTCAAGATAAAGTGTATTAATCTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTTGGATATTTTTTTTTCCTACTCAAGATAAAGTGTATTAATCTTT  450

seq1  TCTCTTTGCTGGGAATTAATTTCAGCATAGGGGTGTTTCAAGATCTAATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTGCTGGGAATTAATTTCAGCATAGGGGTGTTTCAAGATCTAATG  500

seq1  AGTTCCTCACTATGGGGAGCTTTTGCTGGCACACAGCTCTAGTTTCACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCTCACTATGGGGAGCTTTTGCTGGCACACAGCTCTAGTTTCACAT  550

seq1  TGCCCTTCGTAAAAGATTTTAATCATAAGGAAATTTAAGATACATAAATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCTTCGTAAAAGATTTTAATCATAAGGAAATTTAAGATACATAAATC  600

seq1  TGATACTTAGTGAACAAACGAGACTTCCATTAGTTTTATGCTTGTGCTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATACTTAGTGAACAAACGAGACTTCCATTAGTTTTATGCTTGTGCTTT  650

seq1  CCTTAAAAGCAAGAGAGGCTAGAGAGACGACTCAGCAGTTATGATAACTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAAAAGCAAGAGAGGCTAGAGAGACGACTCAGCAGTTATGATAACTT  700

seq1  GCTCTGCAATCATGAGGACCAGAGCCCAGATCTCAACACCTGCATAACAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGCAATCATGAGGACCAGAGCCCAGATCTCAACACCTGCATAACAA  750

seq1  GCTGGGTTTCCCTGTAAATGAAAGGAGGACCACTGGGGCTTGCTGGCTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGTTTCCCTGTAAATGAAAGGAGGACCACTGGGGCTTGCTGGCTTC  800

seq1  CAGGCTAAAGGACGAGTCCCAGAAGGGCAAGAAGAGAGTAATAAAGAATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTAAAGGACGAGTCCCAGAAGGGCAAGAAGAGAGTAATAAAGAATT  850

seq1  C  851
      |
seq2  C  851

seq1: chr18_23520413_23521450
seq2: B6Ng01-114P01.g_78_1100

seq1  GATTGCCATACAATGAAATGAAAGTTGTGCTAAATTGATATTGAAAAGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGCCATACAATGAAATGAAAGTTGTGCTAAATTGATATTGAAAAGAT  50

seq1  AGCCACAGATAATTTCTCCTAATAGCTCTAGAATCCCGATCTTCTTCTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCACAGATAATTTCTCCTAATAGCTCTAGAATCCCGATCTTCTTCTTC  100

seq1  CTCTTACTTCCCACCCCCACTTCAAAAGGCCCTTGAAGAGTCAAATTGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTACTTCCCACCCCCACTTCAAAAGGCCCTTGAAGAGTCAAATTGAG  150

seq1  CCCTCTTGCAATATCACATCATGGTAAAGGCCACAAAAGTACTGACCAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTTGCAATATCACATCATGGTAAAGGCCACAAAAGTACTGACCAAG  200

seq1  CTTCCCTTGGGTGTTGGGAGTGGTTTCTGAGAGTATAGATAAGAGATGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCTTGGGTGTTGGGAGTGGTTTCTGAGAGTATAGATAAGAGATGAG  250

seq1  TTGTGGCTTCTGTCTTCTGGATGCTCATCTCTGACAAGATGGACACTTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGGCTTCTGTCTTCTGGATGCTCATCTCTGACAAGATGGACACTTGT  300

seq1  CATAAAATGACACAAGAGTGTCACTCCACAGAAGCAGAGTGGCCATAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAATGACACAAGAGTGTCACTCCACAGAAGCAGAGTGGCCATAAGA  350

seq1  GATGTCTTCCTCAGTCTCTCCATTTATAAGCATGCTTTTTATCAAACTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTCTTCCTCAGTCTCTCCATTTATAAGCATGCTTTTTATCAAACTCA  400

seq1  CATTTTTAAAGCAAACAAATTGGACATACATATTTGCGTGTGTTTACTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTAAAGCAAACAAATTGGACATACATATTTGCGTGTGTTTACTTT  450

seq1  CTATAACCTGCTGAACCCAGCCTTTTAACAAACATAACAGTGTATATAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAACCTGCTGAACCCAGCCTTTTAACAAACATAACAGTGTATATAAA  500

seq1  CTCACTGTAGGCAGAAATCGTTATCCAGAGAAGAAAATGGTTGCATATAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTGTAGGCAGAAATCGTTATCCAGAGAAGAAAATGGTTGCATATAC  550

seq1  TAAGAGAAACCAGAAAAGGGGATAACATTTGAAATCTAAATAAAGAAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGAAACCAGAAAAGGGGATAACATTTGAAATCTAAATAAAGAAAAT  600

seq1  ATCCAACCTTTTTTAAAAGTAGTTGAACAAATTATCACACTCCAAAATAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAACCTTTTTTAAAAGTAGTTGAACAAATTATCACACTCCAAAATAA  650

seq1  CTAACCCTATTTATGATGCTAGTTAGAATTATTATTTTAAGGAAAAAACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACCCTATTTATGATGCTAGTTAGAATTATTATTTTAAGGAAAAAACA  700

seq1  GAGACCATGTAGTTTTGTGACTACTGTTTATCTTAAGTGACACTACAGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACCATGTAGTTTTGTGACTACTGTTTATCTTAAGTGACACTACAGTG  750

seq1  TACACATCACTTATAAGAGCCAAATAAATAGCAGTAGGCAGGAGGCAATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACATCACTTATAAGAGCCAAATAAATAGCAGTAGGCAGGAGGCAATG  800

seq1  TTAAAAAATCCAATTGATGAATTCTGAAAAATCAATCAGGAGATAGAGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAATCCAATTGATGAATTCTGAAAAATCAATCAGGAGATAGAGTT  850

seq1  AAGGTGTTTTTGTTGTTGTTGTTGTTTTGTTTTTTGTTTTTTGTTGTTCT  900
      || |||||||||||||||||||   ||||||||    |||||| || || 
seq2  AA-GTGTTTTTGTTGTTGTTGT--GTTTGTTTT---GTTTTTGGTGGTCC  894

seq1  CTAAAACACCACTGACTTGAGGGAAGATATAAGCAGTTCCATGGGTTAGA  950
      || ||||||||||||| |||||| |||||||||||||| |||||| ||||
seq2  CT-AAACACCACTGAC-TGAGGG-AGATATAAGCAGTT-CATGGG-TAGA  939

seq1  ATACTCTGATGGGATCACAGTATTCAAAGTGAAGAAGCATGCATCAGAAA  1000
      ||||||||||||||||||| ||||||||||||||||||||||| ||| ||
seq2  ATACTCTGATGGGATCACA-TATTCAAAGTGAAGAAGCATGCACCAG-AA  987

seq1  TAGATGTTTCTCCAAGGGATGTCAGAATTCATCAATAG  1038
      ||||||||| |||||||||||||||||||| |||||||
seq2  TAGATGTTT-TCCAAGGGATGTCAGAATTC-TCAATAG  1023