BAC Information

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BAC

Clone NameB6Ng01-116F17
Chromosome18 (Build37)
Map Location 85,876,105 - 86,020,981
singlet/doubletdoublet
Overlap geneLOC665382, LOC545269
Upstream geneLOC100039725, B230399E16Rik, Cyb5, Fbxo15, 1700034H14Rik, LOC100039765
Downstream geneLOC545270, LOC665402, Neto1, Cbln2, LOC100039872, LOC100039881, LOC665437
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-116F17.bB6Ng01-116F17.g
ACCDH921375DH921376
length3091,077
definitionDH921375|Mus musculus domesticus DNA, BAC clone: B6Ng01-116F17, 5' end.DH921376|Mus musculus domesticus DNA, BAC clone: B6Ng01-116F17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(86,020,673 - 86,020,981)(85,876,105 - 85,877,194)
sequence
attttttattgcataatagaattccattgtatgtttgcaatgtgtgtgtg
tgtgtttttttaaatcaaccatctattgagagatgtcaaggctgttttaa
tttattatctattgtaaagagtgtgtcaataaatatgaatttgccagtgt
cttcaaaatagggcatatagtctttcaggtgtgtgtccagaaatggagga
aatgagtcaaagtcagaaagaggagtatggcatattttgtttcaagtgaa
gatcctagattttaatgtattgatttaggtgtgggtgtgtattatgaatg
tgtgtgtat
gaattctaaggcaattttcaaatgttcccttagaactatagtcacaaaca
aaactaatattcaaaatcagattcatttcttagataacacattaaatacg
ttgaataatttctacatcttaaaataggtgaaaaagtaatatatatatgt
caagctatatatctgagctagcctgtaaactcaaatataattcaagaggg
atgatgaaatataaaatctggagaaaagtgtatttattgtttttagagtc
tcatgtctttgagaggaacacagaacttgatatctaacttgggccttgaa
taaaatgagaggatttggatgcaagtcttcaaactaagtgcaaaaagcat
caatgatttgtaatgactagagacagacaattagaatttagttacttaat
tgattttttaaaaattaagttgtcactcaggattattcatttagagagtc
tccttatctatctacgttttcagcctgcccagcttccatagctgtggccc
tttgtatgcctttgaagccactgaccacacctggttctggcctctgcttc
tgtttgtacatcttttcatcttacaccctggtttttgcctcttccacaga
gagacactgatgtttagatgattaaaagtgactctactgtgtgattcaga
atagtctctccatgccgaagagatgtaccacttacaacaaatgttgatat
tagacatgactgacccctcactcccaggacggacactggtagtagatctt
gctgatactgatagtatctgcttattcagagaagatacaaaatagcattt
ccagttgctttattaacaacgatctgtggctgaaagtgactactcaattt
taatttagaaatcattagataattagataaagtataatcttaattagaaa
tgggttaattatatttctcattcacagaaactaaagagcatgacaactag
atatctaacatcacccatcctaagaaaataatctagctttcttaccacat
ttctgttatttgccctatttcttcagtgaatgttttttattaattgtctg
aaggaaattttttggttcctggttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_86020673_86020981
seq2: B6Ng01-116F17.b_50_358 (reverse)

seq1  ATACACACACATTCATAATACACACCCACACCTAAATCAATACATTAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACACACATTCATAATACACACCCACACCTAAATCAATACATTAAAA  50

seq1  TCTAGGATCTTCACTTGAAACAAAATATGCCATACTCCTCTTTCTGACTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGATCTTCACTTGAAACAAAATATGCCATACTCCTCTTTCTGACTT  100

seq1  TGACTCATTTCCTCCATTTCTGGACACACACCTGAAAGACTATATGCCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCATTTCCTCCATTTCTGGACACACACCTGAAAGACTATATGCCCT  150

seq1  ATTTTGAAGACACTGGCAAATTCATATTTATTGACACACTCTTTACAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGAAGACACTGGCAAATTCATATTTATTGACACACTCTTTACAATA  200

seq1  GATAATAAATTAAAACAGCCTTGACATCTCTCAATAGATGGTTGATTTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATAAATTAAAACAGCCTTGACATCTCTCAATAGATGGTTGATTTAA  250

seq1  AAAAACACACACACACACATTGCAAACATACAATGGAATTCTATTATGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACACACACACACACATTGCAAACATACAATGGAATTCTATTATGCA  300

seq1  ATAAAAAAT  309
      |||||||||
seq2  ATAAAAAAT  309

seq1: chr18_85876105_85877194
seq2: B6Ng01-116F17.g_69_1145

seq1  GAATTCTAAGGCAATTTTCAAATGTTCCCTTAGAACTATAGTCACAAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAGGCAATTTTCAAATGTTCCCTTAGAACTATAGTCACAAACA  50

seq1  AAACTAATATTCAAAATCAGATTCATTTCTTAGATAACACATTAAATACG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTAATATTCAAAATCAGATTCATTTCTTAGATAACACATTAAATACG  100

seq1  TTGAATAATTTCTACATCTTAAAATAGGTGAAAAAGTAATATATATATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATAATTTCTACATCTTAAAATAGGTGAAAAAGTAATATATATATGT  150

seq1  CAAGCTATATATCTGAGCTAGCCTGTAAACTCAAATATAATTCAAGAGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTATATATCTGAGCTAGCCTGTAAACTCAAATATAATTCAAGAGGG  200

seq1  ATGATGAAATATAAAATCTGGAGAAAAGTGTATTTATTGTTTTTAGAGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGAAATATAAAATCTGGAGAAAAGTGTATTTATTGTTTTTAGAGTC  250

seq1  TCATGTCTTTGAGAGGAACACAGAACTTGATATCTAACTTGGGCCTTGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTCTTTGAGAGGAACACAGAACTTGATATCTAACTTGGGCCTTGAA  300

seq1  TAAAATGAGAGGATTTGGATGCAAGTCTTCAAACTAAGTGCAAAAAGCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATGAGAGGATTTGGATGCAAGTCTTCAAACTAAGTGCAAAAAGCAT  350

seq1  CAATGATTTGTAATGACTAGAGACAGACAATTAGAATTTAGTTACTTAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGATTTGTAATGACTAGAGACAGACAATTAGAATTTAGTTACTTAAT  400

seq1  TGATTTTTTAAAAATTAAGTTGTCACTCAGGATTATTCATTTAGAGAGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTTTTAAAAATTAAGTTGTCACTCAGGATTATTCATTTAGAGAGTC  450

seq1  TCCTTATCTATCTACGTTTTCAGCCTGCCCAGCTTCCATAGCTGTGGCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTATCTATCTACGTTTTCAGCCTGCCCAGCTTCCATAGCTGTGGCCC  500

seq1  TTTGTATGCCTTTGAAGCCACTGACCACACCTGGTTCTGGCCTCTGCTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTATGCCTTTGAAGCCACTGACCACACCTGGTTCTGGCCTCTGCTTC  550

seq1  TGTTTGTACATCTTTTCATCTTACACCCTGGTTTTTGCCTCTTCCACAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTACATCTTTTCATCTTACACCCTGGTTTTTGCCTCTTCCACAGA  600

seq1  GAGACACTGATGTTTAGATGATTAAAAGTGACTCTACTGTGTGATTCAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACACTGATGTTTAGATGATTAAAAGTGACTCTACTGTGTGATTCAGA  650

seq1  ATAGTCTCTCCATGCCGAAGAGATGTACCACTTACAACAAATGTTGATAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTCTCTCCATGCCGAAGAGATGTACCACTTACAACAAATGTTGATAT  700

seq1  TAGACATGACTGACCCCTCACTCCCAGGACGGACACTGGTAGTAGATCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACATGACTGACCCCTCACTCCCAGGACGGACACTGGTAGTAGATCTT  750

seq1  GCTGATACTGATAGTATCTGCTTATTCAGAGAAGATACAAAATAGCATTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGATACTGATAGTATCTGCTTATTCAGAGAAGATACAAAATAGCATTT  800

seq1  CCAGTTGCTTTATTAACAACGATCTGTGGCTGAAAGTGACTACTCAATTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTGCTTTATTAACAACGATCTGTGGCTGAAAGTGACTACTCAATTT  850

seq1  TAATTTAGAAATCATTAGATAATTAGATAAAGTATAATCTTAATTAGAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTAGAAATCATTAGATAATTAGATAAAGTATAATCTTAATTAGAAA  900

seq1  TGGGTTAATTATATTTCTCATTCACAGAAACTAAAGAGCATGACAACTAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTAATTATATTTCTCATTCACAGAAACTAAAGAGCATGACAACTAG  950

seq1  ATATCTAACATCACCCATCCTAAGAAAATAATCTAGCTTTCTTTACCACA  1000
      ||||||||||||||||||||||||||||||||||||||||| ||||||| 
seq2  ATATCTAACATCACCCATCCTAAGAAAATAATCTAGCTTTC-TTACCAC-  998

seq1  ATTTCTGTATATTTGCCCTATTTTCTTCAGTGAATGTTTTTGTATTAATT  1050
      |||||||| ||||||||||| |||||||||||||||||||| ||||||||
seq2  ATTTCTGT-TATTTGCCCTA-TTTCTTCAGTGAATGTTTTT-TATTAATT  1045

seq1  GTCTGAAGGTAATTTTTTTGTTTCTTGTTTTTTGGTTTTT  1090
      ||||||||| |||||||| ||| || ||||||        
seq2  GTCTGAAGGAAATTTTTTGGTTCCTGGTTTTT--------  1077