BAC Information

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BAC

Clone NameB6Ng01-120O07
Chromosome18 (Build37)
Map Location 75,359,287 - 75,491,851
singlet/doubletdoublet
Overlap geneDym
Upstream gene2810433K01Rik, Cxxc1, EG435570, Mbd1, Ccdc11, LOC628298, LOC668124, LOC668126, Myo5b, Acaa2, LOC672799, Lipg, Rpl17, BC031181, LOC628356, EG667777
Downstream geneSmad7, Gm672, Zbtb7c, 4833419G08Rik, LOC668184, Smad2, LOC668188
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-120O07.bB6Ng01-120O07.g
ACCDH924718DH924719
length7911,109
definitionDH924718|Mus musculus domesticus DNA, BAC clone: B6Ng01-120O07, 5' end.DH924719|Mus musculus domesticus DNA, BAC clone: B6Ng01-120O07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(75,491,061 - 75,491,851)(75,359,287 - 75,360,412)
sequence
gaattcattcgtcctgagagagtcatgtttttctaaaaagtctggtaggc
tgtgtgggtactgctcctctgcgctggagttggtggtctgtggtcttccc
cgtcacctctagctgtgctccggggaagacccctgcttcattctcttggc
ccctgggaaggcggagctcttgctagcctgctgcttagccccaggcctgg
acttcgcctggcagggccaaaatacaatcaggcagagctaaactttctgg
ataattctgtgcaactctgaagagttggttagtacctcagggatctcctc
aaacggcgaccctcctgttttacaccaaatttctgccctggcacattttg
aagtctgcccctctgaggctactccgagaccctgattcccactgtcaccg
cgcagttagcagagcatccaggttctgggtggtaccctagctcctggctg
tgttccagatccttgactctgttcgcgctcttgtttgcctctttttccac
tctggtttgcctcgccactgctctcaggaccctacctaggagctctgcgc
actacctcctgtgctcaatcatctcagcgcgatgccaacagatggaagta
gaccaaataagcccagaaaggaggcggctcctgcaacccctcaaggttgt
tggaagagggagaattagcccatcaccaaagcgccaaaggaggcctctgc
ccctgctttgataggagattcagggccggggttgggggccggggtgaggt
gaggaatcttaagattttgacaagggtggatttgggggtac
gaattcatggagttttaaagtcctcctaatagtttcttccattaatcaga
gtacaacattggcgtttctaagaggaagtggtcatatttaatgccaatca
tgagtatgactgtaatggtagaacccattttgtgatacacgtttgaattc
tctgttgaacctctcagttcttactgacttagtgggtttcttcatccata
aactttgcagcaagtcctgagcccctggtccctaggatcaccagggaacg
ctcgctatgacctgtccctgcagctctcgacctaacactgagcacatgag
gctgcaacccacaccctctctgccagtcttgctgcctttgcccagagcta
acagagcaggagtgactggagttgaatcactacctgtgccaaggatccaa
taggtgatttgagagcacagtagcgggcctgaagtgtggcccagcaggga
aagagtctgctgcgcaagcctgaggacctgagttcgatcccccagcacct
agtaaaagtggaaggagaaaaggagttccatagaatagtcccctggcctc
cgtgggcatactgtggtgtgctcatccccacacatgcatcacacacagta
acagtgaagagagcaaacctgttagcaagggaacggggatgctctccttt
tgtaattcctcagccgtttaactggttgagtatccttggcaagagccaca
gatttctgtgtcctggactcaccccagacggcttgcccgcagagctggga
aaggaggaggagagggtctccacagctctggaggtccagatgtgtgcttt
ctgcaccagattggagaccatattagcagagttttaataagtgcttaaaa
ataagcctatgttttccttcttgcactaacacatagaacactcagggtct
gcgtagaggtttctcagttataagaaaatgtttatactcattacactgta
taattacaagtcagttgagtacaacgtaaaaagaacatggcaagttacaa
aatatagtgtagtatttaagtcaaccatgttgtctgaacacctcacggga
aacctccatcgcatttgagatattaagaactggcctggctgttgaaggaa
tatacaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_75491061_75491851
seq2: B6Ng01-120O07.b_50_839 (reverse)

seq1  TACCACCAATTCCACCCTTGTCAAAAATCCTAAGATTCCTCACCTCACCC  50
      |||| |||| |||||||||||| |||||| ||||||||||||||||||||
seq2  TACCCCCAAATCCACCCTTGTC-AAAATCTTAAGATTCCTCACCTCACCC  49

seq1  CGGCCCCCAACCCCGGCCCTGAATCTCCTATCAAAGCAGGGGCAGAGGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCCCCCAACCCCGGCCCTGAATCTCCTATCAAAGCAGGGGCAGAGGCC  99

seq1  TCCTTTGGCGCTTTGGTGATGGGCTAATTCTCCCTCTTCCAACAACCTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTGGCGCTTTGGTGATGGGCTAATTCTCCCTCTTCCAACAACCTTG  149

seq1  AGGGGTTGCAGGAGCCGCCTCCTTTCTGGGCTTATTTGGTCTACTTCCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGTTGCAGGAGCCGCCTCCTTTCTGGGCTTATTTGGTCTACTTCCAT  199

seq1  CTGTTGGCATCGCGCTGAGATGATTGAGCACAGGAGGTAGTGCGCAGAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGGCATCGCGCTGAGATGATTGAGCACAGGAGGTAGTGCGCAGAGC  249

seq1  TCCTAGGTAGGGTCCTGAGAGCAGTGGCGAGGCAAACCAGAGTGGAAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAGGTAGGGTCCTGAGAGCAGTGGCGAGGCAAACCAGAGTGGAAAAA  299

seq1  GAGGCAAACAAGAGCGCGAACAGAGTCAAGGATCTGGAACACAGCCAGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAAACAAGAGCGCGAACAGAGTCAAGGATCTGGAACACAGCCAGGA  349

seq1  GCTAGGGTACCACCCAGAACCTGGATGCTCTGCTAACTGCGCGGTGACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGGGTACCACCCAGAACCTGGATGCTCTGCTAACTGCGCGGTGACAG  399

seq1  TGGGAATCAGGGTCTCGGAGTAGCCTCAGAGGGGCAGACTTCAAAATGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAATCAGGGTCTCGGAGTAGCCTCAGAGGGGCAGACTTCAAAATGTG  449

seq1  CCAGGGCAGAAATTTGGTGTAAAACAGGAGGGTCGCCGTTTGAGGAGATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGCAGAAATTTGGTGTAAAACAGGAGGGTCGCCGTTTGAGGAGATC  499

seq1  CCTGAGGTACTAACCAACTCTTCAGAGTTGCACAGAATTATCCAGAAAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGGTACTAACCAACTCTTCAGAGTTGCACAGAATTATCCAGAAAGT  549

seq1  TTAGCTCTGCCTGATTGTATTTTGGCCCTGCCAGGCGAAGTCCAGGCCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTCTGCCTGATTGTATTTTGGCCCTGCCAGGCGAAGTCCAGGCCTG  599

seq1  GGGCTAAGCAGCAGGCTAGCAAGAGCTCCGCCTTCCCAGGGGCCAAGAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTAAGCAGCAGGCTAGCAAGAGCTCCGCCTTCCCAGGGGCCAAGAGA  649

seq1  ATGAAGCAGGGGTCTTCCCCGGAGCACAGCTAGAGGTGACGGGGAAGACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGCAGGGGTCTTCCCCGGAGCACAGCTAGAGGTGACGGGGAAGACC  699

seq1  ACAGACCACCAACTCCAGCGCAGAGGAGCAGTACCCACACAGCCTACCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACCACCAACTCCAGCGCAGAGGAGCAGTACCCACACAGCCTACCAG  749

seq1  ACTTTTTAGAAAAACATGACTCTCTCAGGACGAATGAATTC  791
      |||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTTAGAAAAACATGACTCTCTCAGGACGAATGAATTC  790

seq1: chr18_75359287_75360412
seq2: B6Ng01-120O07.g_67_1175

seq1  GAATTCATGGAGTTTTAAAGTCCTCCTAATAGTTTCTTCCATTAATCAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGGAGTTTTAAAGTCCTCCTAATAGTTTCTTCCATTAATCAGA  50

seq1  GTACAACATTGGCGTTTCTAAGAGGAAGTGGTCATATTTAATGCCAATCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAACATTGGCGTTTCTAAGAGGAAGTGGTCATATTTAATGCCAATCA  100

seq1  TGAGTATGACTGTAATGGTAGAACCCATTTTGTGATACACGTTTGAATTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTATGACTGTAATGGTAGAACCCATTTTGTGATACACGTTTGAATTC  150

seq1  TCTGTTGAACCTCTCAGTTCTTACTGACTTAGTGGGTTTCTTCATCCATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTGAACCTCTCAGTTCTTACTGACTTAGTGGGTTTCTTCATCCATA  200

seq1  AACTTTGCAGCAAGTCCTGAGCCCCTGGTCCCTAGGATCACCAGGGAACG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTGCAGCAAGTCCTGAGCCCCTGGTCCCTAGGATCACCAGGGAACG  250

seq1  CTCGCTATGACCTGTCCCTGCAGCTCTCGACCTAACACTGAGCACATGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGCTATGACCTGTCCCTGCAGCTCTCGACCTAACACTGAGCACATGAG  300

seq1  GCTGCAACCCACACCCTCTCTGCCAGTCTTGCTGCCTTTGCCCAGAGCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCAACCCACACCCTCTCTGCCAGTCTTGCTGCCTTTGCCCAGAGCTA  350

seq1  ACAGAGCAGGAGTGACTGGAGTTGAATCACTACCTGTGCCAAGGATCCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGCAGGAGTGACTGGAGTTGAATCACTACCTGTGCCAAGGATCCAA  400

seq1  TAGGTGATTTGAGAGCACAGTAGCGGGCCTGAAGTGTGGCCCAGCAGGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTGATTTGAGAGCACAGTAGCGGGCCTGAAGTGTGGCCCAGCAGGGA  450

seq1  AAGAGTCTGCTGCGCAAGCCTGAGGACCTGAGTTCGATCCCCCAGCACCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTCTGCTGCGCAAGCCTGAGGACCTGAGTTCGATCCCCCAGCACCT  500

seq1  AGTAAAAGTGGAAGGAGAAAAGGAGTTCCATAGAATAGTCCCCTGGCCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAAAGTGGAAGGAGAAAAGGAGTTCCATAGAATAGTCCCCTGGCCTC  550

seq1  CGTGGGCATACTGTGGTGTGCTCATCCCCACACATGCATCACACACAGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGGGCATACTGTGGTGTGCTCATCCCCACACATGCATCACACACAGTA  600

seq1  ACAGTGAAGAGAGCAAACCTGTTAGCAAGGGAACGGGGATGCTCTCCTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGAAGAGAGCAAACCTGTTAGCAAGGGAACGGGGATGCTCTCCTTT  650

seq1  TGTAATTCCTCAGCCGTTTAACTGGTTGAGTATCCTTGGCAAGAGCCACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATTCCTCAGCCGTTTAACTGGTTGAGTATCCTTGGCAAGAGCCACA  700

seq1  GATTTCTGTGTCCTGGACTCACCCCAGACGGCTTGCCCGCAGAGCTGGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCTGTGTCCTGGACTCACCCCAGACGGCTTGCCCGCAGAGCTGGGA  750

seq1  AAGGAGGAGGAGAGGGTCTCCACAGCTCTGGAGGTCCAGATGTGTGCTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGGAGGAGAGGGTCTCCACAGCTCTGGAGGTCCAGATGTGTGCTTT  800

seq1  CTGCACCAGATTGGAGACCATATTAGCAGAGTTTTAATAAGTGCTTAAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCACCAGATTGGAGACCATATTAGCAGAGTTTTAATAAGTGCTTAAAA  850

seq1  ATAAGCCTATGTTTTCCTTCTTGCACTAACACATAGAACACTCAGGGTCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGCCTATGTTTTCCTTCTTGCACTAACACATAGAACACTCAGGGTCT  900

seq1  GCGTAGAGGTTTCTCAGTTTATTAAGAAAATGTTTATACTCATTACACTG  950
      |||||||||||||||||||   ||||||||||||||||||||||||||||
seq2  GCGTAGAGGTTTCTCAGTT--ATAAGAAAATGTTTATACTCATTACACTG  948

seq1  TATAATTTACAAGTCAGTTGAGTAACAACGTAAAAAGAACATGGCAAGTT  1000
      ||||| ||||||||||||||||| ||||||||||||||||||||||||||
seq2  TATAA-TTACAAGTCAGTTGAGT-ACAACGTAAAAAGAACATGGCAAGTT  996

seq1  ACAAAAATATTAGTGTTAGTATTTAAGTCCAACCATGTTTGTCTGAACAC  1050
      || |||||| ||||| |||||||||||| |||||||| ||||||||||||
seq2  AC-AAAATA-TAGTG-TAGTATTTAAGT-CAACCATG-TTGTCTGAACAC  1041

seq1  CTCACGGGAAACCCTTCCATCGCATTTTAGATAATGAGGAAACTGCCCTG  1100
      |||||||||||||  |||||||||||| ||||| | ||  ||||| ||||
seq2  CTCACGGGAAACC--TCCATCGCATTTGAGATATTAAG--AACTGGCCTG  1087

seq1  GCTGTTGAAGGGAAAATAATACAAAA  1126
      |||||||||||   ||| ||||||||
seq2  GCTGTTGAAGG---AAT-ATACAAAA  1109