BAC Information

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BAC

Clone NameB6Ng01-122M22
Chromosome18 (Build37)
Map Location 72,274,795 - 72,393,696
singlet/doubletdoublet
Overlap geneDcc
Upstream genenone
Downstream geneLOC629684, LOC100043411, LOC100042955
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-122M22.bB6Ng01-122M22.g
ACCDH926138DH926139
length1,098290
definitionDH926138|Mus musculus domesticus DNA, BAC clone: B6Ng01-122M22, 5' end.DH926139|Mus musculus domesticus DNA, BAC clone: B6Ng01-122M22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(72,392,938 - 72,393,696)(72,274,795 - 72,275,083)
sequence
gaattctgaacacctgttggctacccttctcattttttgacctccacatt
atcaccagtgccttttattgtgtaggtgtctaaccactgatgcacctaac
actgagtcttatatagcttctctagaaaaagttattttcatagtagcacc
atccagtatcctgactttcgggtatttaaaatgcccctatttttatgctt
cactcaaacatctcctcacatcttccagttaagcatgggagtgttcattg
acataatagatgtaacctcttgtgacctaaacacccaatcttcctctttc
ctcttcctgctccttctgaagtcctctttaatttagggcaactctgtgct
ttcaattgtcaatctccaaactctagtattttcttggctctctattcatt
caggcataagccatcaatccagtcttagagtctatactgtccatttgtac
tcagaatgtaaggacttctccctgcttccttcaccctttactctgcggtc
ctattcctcattgcagttatcttaggaactttttgatgagtcccccagct
ccaaggtttgccatggtaaaatattgtagctttagtaatatgtgacatca
tcaacctttaagcatgtccccataccttcctagttcataatcttctaaca
cttcccatctcaatgggagtaaaaccaaaccctttccaatgccctaaaga
ctgtgtactattgataccttcatttttttttttaaatcttgagccctagt
catccccatgctactctcgtttcccatgttcctgatacactgacctattt
tatttatttatttatttatttatttattatttattttacctaatttcaat
tttaacaccaactttctaactgcccattgctctgctctgcttctcttagt
cacagggtgagctcctttgcctcctttctatcttatctaacctgtccctt
tccctatgagcactgcttaccttttccttttccaaatgttacgactctta
ccttttctctcttctgctttcatttataatttctccacgaggttactgta
tattattatatgtgggatatattcaatgatgatgaactgggatgatga
atggctccagatacatttgtagcagagaatggccctatctgacatcaatc
agagtagaggccctgggtcctgtggaggcttgatgcccccgcataggagg
atgctaaagcagtgaggtatgagtaagaaagtaggtggaggagcaccctc
atagagacataagggagggaaaagaggagggattggatgaggagagtgtg
gaagggtaaccgggaagggggatatcatttaaatgtaaatgaataaaacg
attaacttaaaaaatgtgtagttctagtgttcacagcact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_72392938_72393696
seq2: B6Ng01-122M22.b_388_1145 (reverse)

seq1  TCATCATCACCAG-TCATCATCAATTGAATATATACCACATATAATAATA  49
      |||||||| |||| |||||||| ||||||||||| |||||||||||||||
seq2  TCATCATC-CCAGTTCATCATC-ATTGAATATATCCCACATATAATAATA  48

seq1  TACAGTAAACCTCGTGGAGAAA-TATAAATGAAGGCAG-AGAGAGAAAAG  97
      |||||| ||||||||||||||| |||||||||| |||| |||||||||||
seq2  TACAGT-AACCTCGTGGAGAAATTATAAATGAAAGCAGAAGAGAGAAAAG  97

seq1  GTAAGAGTCGTAACATTTGGAAAAGGAAAAGGTAAGCAGTGGCTCATAGG  147
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GTAAGAGTCGTAACATTTGGAAAAGGAAAAGGTAAGCAGT-GCTCATAGG  146

seq1  GAAAGGGACAGGTTAGATAAGATAGAAAGGAGGCAAAGGAGCTCACCCTG  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGGACAGGTTAGATAAGATAGAAAGGAGGCAAAGGAGCTCACCCTG  196

seq1  TGACTAAGAGAAGCAGAGCAGAGCAATGGGCAGTTAGAAAGTTGGTGTTA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTAAGAGAAGCAGAGCAGAGCAATGGGCAGTTAGAAAGTTGGTGTTA  246

seq1  AAATTGAAATTAGGTAAAATAAATAATAAATAAATAAATAAATAAATAAA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGAAATTAGGTAAAATAAATAATAAATAAATAAATAAATAAATAAA  296

seq1  TAAAATAGGTCAGTGTATCAGGAACATGGGAAACGAGAGTAGCATGGGGA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATAGGTCAGTGTATCAGGAACATGGGAAACGAGAGTAGCATGGGGA  346

seq1  TGACTAGGGCTCAAGATTTAAAAAAAAAAATGAAGGTATCAATAGTACAC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTAGGGCTCAAGATTTAAAAAAAAAAATGAAGGTATCAATAGTACAC  396

seq1  AGTCTTTAGGGCATTGGAAAGGGTTTGGTTTTACTCCCATTGAGATGGGA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTTAGGGCATTGGAAAGGGTTTGGTTTTACTCCCATTGAGATGGGA  446

seq1  AGTGTTAGAAGATTATGAACTAGGAAGGTATGGGGACATGCTTAAAGGTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTAGAAGATTATGAACTAGGAAGGTATGGGGACATGCTTAAAGGTT  496

seq1  GATGATGTCACATATTACTAAAGCTACAATATTTTACCATGGCAAACCTT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATGTCACATATTACTAAAGCTACAATATTTTACCATGGCAAACCTT  546

seq1  GGAGCTGGGGGACTCATCAAAAAGTTCCTAAGATAACTGCAATGAGGAAT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTGGGGGACTCATCAAAAAGTTCCTAAGATAACTGCAATGAGGAAT  596

seq1  AGGACCGCAGAGTAAAGGGTGAAGGAAGCAGGGAGAAGTCCTTACATTCT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACCGCAGAGTAAAGGGTGAAGGAAGCAGGGAGAAGTCCTTACATTCT  646

seq1  GAGTACAAATGGACAGTATAGACTCTAAGACTGGATTGATGGCTTATGCC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTACAAATGGACAGTATAGACTCTAAGACTGGATTGATGGCTTATGCC  696

seq1  TGAATGAATAGAGAGCCAAGAAAATACTAGAGTTTGGAGATTGACAATTG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGAATAGAGAGCCAAGAAAATACTAGAGTTTGGAGATTGACAATTG  746

seq1  AAAGCACAGAGT  759
      ||||||||||||
seq2  AAAGCACAGAGT  758

seq1: chr18_72274795_72275083
seq2: B6Ng01-122M22.g_73_361

seq1  ATGGCTCCAGATACATTTGTAGCAGAGAATGGCCCTATCTGACATCAATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTCCAGATACATTTGTAGCAGAGAATGGCCCTATCTGACATCAATC  50

seq1  AGAGTAGAGGCCCTGGGTCCTGTGGAGGCTTGATGCCCCCGCATAGGAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTAGAGGCCCTGGGTCCTGTGGAGGCTTGATGCCCCCGCATAGGAGG  100

seq1  ATGCTAAAGCAGTGAGGTATGAGTAAGAAAGTAGGTGGAGGAGCACCCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTAAAGCAGTGAGGTATGAGTAAGAAAGTAGGTGGAGGAGCACCCTC  150

seq1  ATAGAGACATAAGGGAGGGAAAAGAGGAGGGATTGGATGAGGAGAGTGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGACATAAGGGAGGGAAAAGAGGAGGGATTGGATGAGGAGAGTGTG  200

seq1  GAAGGGTAACCGGGAAGGGGGATATCATTTAAATGTAAATGAATAAAACG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGTAACCGGGAAGGGGGATATCATTTAAATGTAAATGAATAAAACG  250

seq1  ATTAACTTAAAAAATGTGTAGTTCTAGTGTTCACAGCAC  289
      |||||||||||||||||||||||||||||||||||||||
seq2  ATTAACTTAAAAAATGTGTAGTTCTAGTGTTCACAGCAC  289