BAC Information

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BAC

Clone NameB6Ng01-123J04
Chromosome18 (Build37)
Map Location 79,370,998 - 79,371,931
singlet/doubletsinglet
Overlap genenone
Upstream geneSlc14a2, EG620155, Setbp1
Downstream geneLOC100039242, LOC100039250, LOC383311, LOC433204, LOC545267, LOC100040632, LOC620963, LOC100040604, LOC620692, LOC100040593, LOC639825, Pard6g, Zfp508, LOC665009
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-123J04.bB6Ng01-123J04.g
ACCDH926702DH926703
length983394
definitionDH926702|Mus musculus domesticus DNA, BAC clone: B6Ng01-123J04, 5' end.DH926703|Mus musculus domesticus DNA, BAC clone: B6Ng01-123J04, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaccacaaggtgttcccgggggtgtgctgagtaattaaaagtct
gtatcgtgaaaggaaaagcttctaacattgaattggatattaatagatca
agatggcatgccctgaatcacaaaggaagtttttggttttggttttgttt
tccaattctgagcaatttatacttgacttacaagccaacgattgacagca
ttgtcaactttaggtagaacagaaagtattaacacaacaaccccttgcta
gtcgactttatcctagtaatggaagaagggatagaattactttatagata
aaaaaatcctcatacatacaatgattcaaaaagtcatttatttaatgatc
tgggcaataattgcaacaggtctctttttttaaaaataataaagtagtag
gctttagtctccttttaaataaagatttttaaaacatttttattagatat
tttcttcatttacatttcaaatgctattctgaaagtcccctataccctcc
cccctgccctgctccccaacccacccactcctgcttcctggtcctggcgt
tctcctgtaccgggcatataaagtttgcaataccaaggggcctctcttcc
caatgatggctgactagtccattgtctgctatatatgcagctagagacat
gagctctggagatactggttagttcatattgttgttccacctatagggtt
gcagaccccttcagctccttgggtactttctctagctcctccattggggg
ccccgtgttccatccaatagctgactgtgagcattcacttctgtatttgc
ctggcactggcatagcgacacaagagacagctatatcagggtcctgtcag
caaaatcttgctgtcatatgcaatagtgtctgcatttggtggctgattat
gggatggatccccgggcagggcagtatctggatgttccttactggctgct
tgctcttgcttgctcagcctgctctcttataaa

tctatccctaagtaaattctcttttgtaaatgaaagagtagcttgtagag
ggatacttcgtgaaggattcagcagcagccttgttaacttagtaatctga
atgtacatcatagtaattagttcatatttgggggggggacccaaggagct
gcaggagcttgcaaccccatagcaggaacaacaatatgaactaaccagta
tccccagagccccctgggactaaatcaccaaccaaacacacatggtggga
cccatagctccagctgcatatgtagcagtggacggcctagtcggtcatca
atgggaggaaaggcccttggtcctgtgaaggttctatgctccagtgtagg
gttaatgccagggccaggaatgggagtgggtgggttggggagca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_79370998_79371931
seq2: B6Ng01-123J04.b_49_982

seq1  GAATTCTACCACAAGGTGTTCCCGGGGGTGTGCTGAGTAATTAAAAGTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACCACAAGGTGTTCCCGGGGGTGTGCTGAGTAATTAAAAGTCT  50

seq1  GTATCGTGAAAGGAAAAGCTTCTAACATTGAATTGGATATTAATAGATCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCGTGAAAGGAAAAGCTTCTAACATTGAATTGGATATTAATAGATCA  100

seq1  AGATGGCATGCCCTGAATCACAAAGGAAGTTTTTGGTTTTGGTTTTGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGCATGCCCTGAATCACAAAGGAAGTTTTTGGTTTTGGTTTTGTTT  150

seq1  TCCAATTCTGAGCAATTTATACTTGACTTACAAGCCAACGATTGACAGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAATTCTGAGCAATTTATACTTGACTTACAAGCCAACGATTGACAGCA  200

seq1  TTGTCAACTTTAGGTAGAACAGAAAGTATTAACACAACAACCCCTTGCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCAACTTTAGGTAGAACAGAAAGTATTAACACAACAACCCCTTGCTA  250

seq1  GTCGACTTTATCCTAGTAATGGAAGAAGGGATAGAATTACTTTATAGATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGACTTTATCCTAGTAATGGAAGAAGGGATAGAATTACTTTATAGATA  300

seq1  AAAAAATCCTCATACATACAATGATTCAAAAAGTCATTTATTTAATGATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATCCTCATACATACAATGATTCAAAAAGTCATTTATTTAATGATC  350

seq1  TGGGCAATAATTGCAACAGGTCTCTTTTTTTAAAAATAATAAAGTAGTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCAATAATTGCAACAGGTCTCTTTTTTTAAAAATAATAAAGTAGTAG  400

seq1  GCTTTAGTCTCCTTTTAAATAAAGATTTTTAAAACATTTTTATTAGATAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTAGTCTCCTTTTAAATAAAGATTTTTAAAACATTTTTATTAGATAT  450

seq1  TTTCTTCATTTACATTTCAAATGCTATTCTGAAAGTCCCCTATACCCTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTCATTTACATTTCAAATGCTATTCTGAAAGTCCCCTATACCCTCC  500

seq1  CCCCTGCCCTGCTCCCCAACCCACCCACTCCTGCTTCCTGGTCCTGGCGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGCCCTGCTCCCCAACCCACCCACTCCTGCTTCCTGGTCCTGGCGT  550

seq1  TCTCCTGTACCGGGCATATAAAGTTTGCAATACCAAGGGGCCTCTCTTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTGTACCGGGCATATAAAGTTTGCAATACCAAGGGGCCTCTCTTCC  600

seq1  CAATGATGGCTGACTAGTCCATTGTCTGCTATATATGCAGCTAGAGACAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGATGGCTGACTAGTCCATTGTCTGCTATATATGCAGCTAGAGACAT  650

seq1  GAGCTCTGGAGATACTGGTTAGTTCATATTGTTGTTCCACCTATAGGGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTCTGGAGATACTGGTTAGTTCATATTGTTGTTCCACCTATAGGGTT  700

seq1  GCAGACCCCTTCAGCTCCTTGGGTACTTTCTCTAGCTCCTCCATTGGGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGACCCCTTCAGCTCCTTGGGTACTTTCTCTAGCTCCTCCATTGGGGG  750

seq1  CCCCGTGTTCCATCCAATAGCTGACTGTGAGCATTCACTTCTGTATTTGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCGTGTTCCATCCAATAGCTGACTGTGAGCATTCACTTCTGTATTTGC  800

seq1  CTGGCACTGGCATAGCGACACAAGAGACAGCTATATCAGGGTCCTGTCAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCACTGGCATAGCGACACAAGAGACAGCTATATCAGGGTCCTGTCAG  850

seq1  CAAAATCTTGCTGTCATATGCAATAGTGTCTGCATTTGGTGGCTGATTAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATCTTGCTGTCATATGCAATAGTGTCTGCATTTGGTGGCTGATTAT  900

seq1  GGGATGGATCCCCGGGCAGGGCAGTATCTGGATG  934
      ||||||||||||||||||||||||||||||||||
seq2  GGGATGGATCCCCGGGCAGGGCAGTATCTGGATG  934


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