BAC Information

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BAC

Clone NameB6Ng01-125E05
Chromosome18 (Build37)
Map Location 27,093,814 - 27,261,493
singlet/doubletdoublet
Overlap geneEG665977
Upstream geneLOC100041274
Downstream geneEG665646
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-125E05.bB6Ng01-125E05.g
ACCDH927947DH927948
length1,021529
definitionDH927947|Mus musculus domesticus DNA, BAC clone: B6Ng01-125E05, 5' end.DH927948|Mus musculus domesticus DNA, BAC clone: B6Ng01-125E05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(27,260,941 - 27,261,493)(27,093,814 - 27,094,324)
sequence
gaattcactcatcaatggtaaagtttaaaagggcccatttataaacaatc
tatgagtaatgatttgaataggaacgatatacaaaggttcaggcattgat
tactttgtacatttctgatggaactgtttgggaagggtcaggagatttgt
ccttgtttcagtacttgtgctatgcccactttcctctcttttggaatggt
aatgtattctgtgcattgtaccttcaaagcgtgtgatttactttttgctt
ttgattgtacagaggttacaattaaagatttcttgagcctcagaagagac
ttcgtagtgttgatattgttatggattgtgggttcttttgaagttagact
aagcataatttgtatgatgatatggcaaaaagcttatgagggccagggag
tagaatgtggtgattttaatgaaaatggttcccataggctcatgtgtcta
attcgttcgctcagttagtgagacagatatttaggaaggagtaaatatcg
ctggccttgttgaaggaggtatgtcacttaggagtgaactttgaggattc
aaagtctctctacattcccagttatgtctctctaactcaaatatgtagct
caaatataagctctccactattgtccagtgctgacccttcctgcctacct
actgctctgctctcctctgcttgtgatctcaaggttccagaaggttagtg
cttacagccagtaattaaatgctgttttttatgtcacagccacagaaaag
aaaccaaagcaaaattcaaatctaagtcaattgaactcaaataaagacta
ccctataatctgaaactgtattttaatattaaaacgggtggttttggcct
ttattaggtcaaaataaaaaaaatgtcaatagcatgccaacactaaacct
ccagtttcacgttgtactcatttgatattttgtcggctgagaaatagtaa
ttctagcttatacctaagcacatttatcctgatcataattgtagtgatac
aatcatttcttattaaacaaa
gaattctgttgaatttttagaagggtacaaacaaactgcattataggagg
tttgtgatccaaaatggggaaaaggatgcagagaaaaatctatatctaca
aaagaacacttacacagtacagtttgtgatactccctatacagaaaatgg
cataagcagtgtgacgaacagaaaaagaaaaggcaaatagaactatttac
aaagagttgacctagtattaaatgttggcttagaaacagagaggcctcaa
caggtccaggcacttgccgacaaatgatgtaaacctgacaatttcagatc
aatctccagagcccacgtaaaagtgaaggagataactgactctacaaggt
tgtcttgagactttgctctgtgacataaatgtcacatgctctgtgacata
agtgtcaacacacacatgcctgtacacacacacacgcatacgcatgcacg
cacactgtatgatatatatatatatatatatatatatatatatatatata
tatatattataatgtgtgtgtgtgtgcgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_27260941_27261493
seq2: B6Ng01-125E05.b_49_601 (reverse)

seq1  TTTGAATCCTCAAAGTTCACTCCTAAGTGACATACCTCCTTCAACAAGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAATCCTCAAAGTTCACTCCTAAGTGACATACCTCCTTCAACAAGGC  50

seq1  CAGCGATATTTACTCCTTCCTAAATATCTGTCTCACTAACTGAGCGAACG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCGATATTTACTCCTTCCTAAATATCTGTCTCACTAACTGAGCGAACG  100

seq1  AATTAGACACATGAGCCTATGGGAACCATTTTCATTAAAATCACCACATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGACACATGAGCCTATGGGAACCATTTTCATTAAAATCACCACATT  150

seq1  CTACTCCCTGGCCCTCATAAGCTTTTTGCCATATCATCATACAAATTATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTCCCTGGCCCTCATAAGCTTTTTGCCATATCATCATACAAATTATG  200

seq1  CTTAGTCTAACTTCAAAAGAACCCACAATCCATAACAATATCAACACTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTCTAACTTCAAAAGAACCCACAATCCATAACAATATCAACACTAC  250

seq1  GAAGTCTCTTCTGAGGCTCAAGAAATCTTTAATTGTAACCTCTGTACAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCTCTTCTGAGGCTCAAGAAATCTTTAATTGTAACCTCTGTACAAT  300

seq1  CAAAAGCAAAAAGTAAATCACACGCTTTGAAGGTACAATGCACAGAATAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGCAAAAAGTAAATCACACGCTTTGAAGGTACAATGCACAGAATAC  350

seq1  ATTACCATTCCAAAAGAGAGGAAAGTGGGCATAGCACAAGTACTGAAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACCATTCCAAAAGAGAGGAAAGTGGGCATAGCACAAGTACTGAAACA  400

seq1  AGGACAAATCTCCTGACCCTTCCCAAACAGTTCCATCAGAAATGTACAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACAAATCTCCTGACCCTTCCCAAACAGTTCCATCAGAAATGTACAAA  450

seq1  GTAATCAATGCCTGAACCTTTGTATATCGTTCCTATTCAAATCATTACTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATCAATGCCTGAACCTTTGTATATCGTTCCTATTCAAATCATTACTC  500

seq1  ATAGATTGTTTATAAATGGGCCCTTTTAAACTTTACCATTGATGAGTGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATTGTTTATAAATGGGCCCTTTTAAACTTTACCATTGATGAGTGAA  550

seq1  TTC  553
      |||
seq2  TTC  553

seq1: chr18_27093814_27094324
seq2: B6Ng01-125E05.g_66_578

seq1  GAATTCTGTTGAATTTTTAGAAGGGTACAAACAAACTGCATTATAGGAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTGAATTTTTAGAAGGGTACAAACAAACTGCATTATAGGAGG  50

seq1  TTTGTGATCCAAAATGGGGAAAAGGATGCAGAGAAAAATCTATATCTACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGATCCAAAATGGGGAAAAGGATGCAGAGAAAAATCTATATCTACA  100

seq1  AAAGAACACTTACACAGTACAGTTTGTGATACTCCCTATACAGAAAATGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAACACTTACACAGTACAGTTTGTGATACTCCCTATACAGAAAATGG  150

seq1  CATAAGCAGTGTGACGAACAGAAAAAGAAAAGGCAAATAGAACTATTTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGCAGTGTGACGAACAGAAAAAGAAAAGGCAAATAGAACTATTTAC  200

seq1  AAAGAGTTGACCTAGTATTAAATGTTGGCTTAGAAACAGAGAGGCCTCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGTTGACCTAGTATTAAATGTTGGCTTAGAAACAGAGAGGCCTCAA  250

seq1  CAGGTCCAGGCACTTGCCGACAAATGATGTAAACCTGACAATTTCAGATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTCCAGGCACTTGCCGACAAATGATGTAAACCTGACAATTTCAGATC  300

seq1  AATCTCCAGAGCCCACGTAAAAGTGAAGGAGATAACTGACTCTACAAGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCCAGAGCCCACGTAAAAGTGAAGGAGATAACTGACTCTACAAGGT  350

seq1  TGTCTTGAGACTTTGCTCTGTGACATAAATGTCACATGCTCTGTGACATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTGAGACTTTGCTCTGTGACATAAATGTCACATGCTCTGTGACATA  400

seq1  AGTGTCAACACACACATGCCTGTACACACACACACGCATACGCATGCACG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTCAACACACACATGCCTGTACACACACACACGCATACGCATGCACG  450

seq1  CACACTGTATG--ATATATATATATATATATATATATATATATATATATA  498
      |||||||||||  |||||||||||||||||||||||||||||||||||||
seq2  CACACTGTATGATATATATATATATATATATATATATATATATATATATA  500

seq1  TATATATTATAAT  511
      |||||||||||||
seq2  TATATATTATAAT  513