BAC Information

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BAC

Clone NameB6Ng01-126B12
Chromosome18 (Build37)
Map Location 59,640,601 - 59,737,400
singlet/doubletdoublet
Overlap genenone
Upstream geneSlc27a6, Isoc1, Adamts19, A730017C20Rik, 4833446K15Rik
Downstream geneLOC667549, EG240327, LOC546714, EG225594, F830016B08Rik, LOC667578, EG667584, LOC435565, Iigp1, EG629292, LOC667597, 2010002N04Rik, Dctn4, Rbm22, Myoz3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-126B12.bB6Ng01-126B12.g
ACCDH928553DH928554
length1,146932
definitionDH928553|Mus musculus domesticus DNA, BAC clone: B6Ng01-126B12, 5' end.DH928554|Mus musculus domesticus DNA, BAC clone: B6Ng01-126B12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(59,736,246 - 59,737,400)(59,640,601 - 59,641,414)
sequence
gaattccaagtatatttcaataaagccattagttaatattttgctttaga
aattattctcatatttttgtgagattatatcatcatactgttgtgttgtt
ccataactatgcttcattttgccatcaaatgatcgatctactgttgtcag
aacgctgcgttttagactcacatggtcatgtctcattctaatgtctattg
gagtttaatcttgaattctactgatacgtggtgacacatacaaagatctg
gtatttaatgactttgactctattttctgtgcaccttgtttatttctgaa
ctagtctaattgtatcagattgcagttttaccattttctatgtcttgaat
cttggatttttgtgttcatacctatagttgcaaaagtgctctagttaact
atactaaatgtaaatgaaacaaaaaaggaatcactctttctgttggtatt
ctgtgtggactccacccccacagttacctggccaacagcctggtaggcct
ggcctactaaaaagggagctgcttgccccctcctctctctctctttcctc
tcttactctcttgccccttgcccccttgttccccctctttcccctacccc
ctccccatgcagttatgaccagcctctacttctctattctctccttctct
ttacctttctctgcctctgctactctcttaacttccctccccatgccctg
aataaactctatttcatactatactgtcatgtggctggtccctcgggggg
gaagggatgtttcttcatgggcccgcccagatatccccttcccccacacc
cacatagaacatatattaataccctttttctttctatgatcacaaatact
ttccccgaacaataacatccagcttccaatacattttagctactatacaa
aaatgtctatttaaagtatagtatctcttggatgaccagattcaaaactg
tcttctcagattcttctgcactgtgatggactggaactaaacaaagttga
agggaagatgtgaactattcatttataatagaagattcataattggggag
accggattcatccagacctcttatccttctagatggcagactcgtcgtat
tttccaaccggattgtgcatgattttcccctctgccaggaggtgct
gaattccacttactcaatagaacgctattcagatgtaaagaaaaatgaag
ttataatattttctggtaagtgaaggtaactaagcaaagtaaatattgca
tactttctctctcatgtagatgttaccttctatgctttggatatgtgtgt
ttcatttagagtacccacagagtttagggtgctagtaaaggaccagggga
aaggaatgggtcttttaaggaagagaaaatcagatatgatcttataaagg
gataaagggaaataagaacaggataattcaatggggtaaaggatgggatg
gcagcatagaggaaggaagatgaagagaaataactaatactaaagccttt
ttgaaaagccatatggaaacctcctactatagatatttcttaaaatatat
aaatattttatataaatataagtttaaaaagagttaccatgtagtgaggg
cacaatacctcaattagtcatgatatgttatcaaataaaatccccagtac
caggaaaggattgcaacattttgagtcattgactaatggatttctataga
cacaccacccaagcattataggttattaccaatgctattggattccctct
aaaacttaatggtaatttctatttttaagttagcctaaaagctagtggac
ttgaaaatgtgtactcatatatttctttttttaaaaaaatatttcctagt
attggttgacctaacccccctaccctttcatctttttatttccccaagct
ttcttaaatctttaacccttagtttatctccctttttctttattatgtct
gtgttctactatcaacttaaactaaatttccctctccttggtatctaaat
tattgttctattgctgtgaaaagaaaccattatcaagggcaattaataga
agaataacattaattttggacctacttaaggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_59736246_59737400
seq2: B6Ng01-126B12.b_48_1193 (reverse)

seq1  AGCACCTACTTTGACAGAGGGAAAAATCATGCAACATATTCAGGTTGGGG  50
      ||||||| |  || ||||||| |||||||||   || | || |||| || 
seq2  AGCACCTCC--TGGCAGAGGGGAAAATCATG---CACAATCCGGTT-GGA  44

seq1  AAATATCGCTGTGTCTGCCCATCTGGGAAGGATATGAGGTCTAGGATGAA  100
      ||||| ||  | ||||| ||||||  |||||||| ||||||| ||||| |
seq2  AAATA-CGACGAGTCTG-CCATCT-AGAAGGATAAGAGGTCT-GGATG-A  89

seq1  ATCTGCTCTCACCATTATTGATTCTTCTATTTCTAAATGAATAGTTCACA  150
      ||| | |||| ||| |  ||| ||||||| || |||||||||||||||||
seq2  ATCCGGTCTCCCCAATTATGAATCTTCTA-TTATAAATGAATAGTTCACA  138

seq1  CTCTTTCCCTCAACTTTGTTT-GTTCAAGTCAATCACAGTGCAGAAGACT  199
       |||| || |||||||||||| |||| |||| |||||||||||||||| |
seq2  -TCTTCCCTTCAACTTTGTTTAGTTCCAGTCCATCACAGTGCAGAAGAAT  187

seq1  CTGAGAAGACAGTTTTGAATCTGGTCATCC-AGAGATACTATACTTTAAA  248
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CTGAGAAGACAGTTTTGAATCTGGTCATCCAAGAGATACTATACTTTAAA  237

seq1  TAGACATTTTTGTATAGTAGCTAAATGTTATTGGAAGCTGGATGTTATTG  298
      |||||||||||||||||||||||||   ||||||||||||||||||||||
seq2  TAGACATTTTTGTATAGTAGCTAAAATGTATTGGAAGCTGGATGTTATTG  287

seq1  TTCGGGGAAAGTA-TTGTGATCATAGAAAGAAAAAGGGTATTAATATATG  347
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TTCGGGGAAAGTATTTGTGATCATAGAAAGAAAAAGGGTATTAATATATG  337

seq1  TTCTATGTGGGTGTGGGGGAAGGGGATATCTGGGCGGGCCCATGAAGAAA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATGTGGGTGTGGGGGAAGGGGATATCTGGGCGGGCCCATGAAGAAA  387

seq1  CATCCCTT-CCCCCCGAGGGACCAGCCACATGACAGTATAGTATGAAATA  446
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCTTCCCCCCCGAGGGACCAGCCACATGACAGTATAGTATGAAATA  437

seq1  GAGTTTATTCAGGGCATGGGGAGGGAAGTTAAGAGAGTAGCAGAGGCAGA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTATTCAGGGCATGGGGAGGGAAGTTAAGAGAGTAGCAGAGGCAGA  487

seq1  GAAAGGTAAAGAGAAGGAGAGAATAGAGAAGTAGAGGCTGGTCATAACTG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGTAAAGAGAAGGAGAGAATAGAGAAGTAGAGGCTGGTCATAACTG  537

seq1  CATGGGGAGGGGGTAGGGGAAAGAGGGGGAACAAGGGGGCAAGGGGCAAG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGGAGGGGGTAGGGGAAAGAGGGGGAACAAGGGGGCAAGGGGCAAG  587

seq1  AGAGTAAGAGAGGAAAGAGAGAGAGAGGAGGGGGCAAGCAGCTCCCTTTT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTAAGAGAGGAAAGAGAGAGAGAGGAGGGGGCAAGCAGCTCCCTTTT  637

seq1  TAGTAGGCCAGGCCTACCAGGCTGTTGGCCAGGTAACTGTGGGGGTGGAG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAGGCCAGGCCTACCAGGCTGTTGGCCAGGTAACTGTGGGGGTGGAG  687

seq1  TCCACACAGAATACCAACAGAAAGAGTGATTCCTTTTTTGTTTCATTTAC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACACAGAATACCAACAGAAAGAGTGATTCCTTTTTTGTTTCATTTAC  737

seq1  ATTTAGTATAGTTAACTAGAGCACTTTTGCAACTATAGGTATGAACACAA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGTATAGTTAACTAGAGCACTTTTGCAACTATAGGTATGAACACAA  787

seq1  AAATCCAAGATTCAAGACATAGAAAATGGTAAAACTGCAATCTGATACAA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCAAGATTCAAGACATAGAAAATGGTAAAACTGCAATCTGATACAA  837

seq1  TTAGACTAGTTCAGAAATAAACAAGGTGCACAGAAAATAGAGTCAAAGTC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGACTAGTTCAGAAATAAACAAGGTGCACAGAAAATAGAGTCAAAGTC  887

seq1  ATTAAATACCAGATCTTTGTATGTGTCACCACGTATCAGTAGAATTCAAG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAATACCAGATCTTTGTATGTGTCACCACGTATCAGTAGAATTCAAG  937

seq1  ATTAAACTCCAATAGACATTAGAATGAGACATGACCATGTGAGTCTAAAA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAACTCCAATAGACATTAGAATGAGACATGACCATGTGAGTCTAAAA  987

seq1  CGCAGCGTTCTGACAACAGTAGATCGATCATTTGATGGCAAAATGAAGCA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCAGCGTTCTGACAACAGTAGATCGATCATTTGATGGCAAAATGAAGCA  1037

seq1  TAGTTATGGAACAACACAACAGTATGATGATATAATCTCACAAAAATATG  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTATGGAACAACACAACAGTATGATGATATAATCTCACAAAAATATG  1087

seq1  AGAATAATTTCTAAAGCAAAATATTAACTAATGGCTTTATTGAAATATAC  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAATTTCTAAAGCAAAATATTAACTAATGGCTTTATTGAAATATAC  1137

seq1  TTGGAATTC  1155
      |||||||||
seq2  TTGGAATTC  1146

seq1: chr18_59640601_59641414
seq2: B6Ng01-126B12.g_186_1002

seq1  GTAGATGTTACCTTCTATGCTTTGGATATGTGTGTTTCATTTAGAGTACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGATGTTACCTTCTATGCTTTGGATATGTGTGTTTCATTTAGAGTACC  50

seq1  CACAGAGTTTAGGGTGCTAGTAAAGGACCAGGGGAAAGGAATGGGTCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAGTTTAGGGTGCTAGTAAAGGACCAGGGGAAAGGAATGGGTCTTT  100

seq1  TAAGGAAGAGAAAATCAGATATGATCTTATAAAGGGATAAAGGGAAATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGAAGAGAAAATCAGATATGATCTTATAAAGGGATAAAGGGAAATAA  150

seq1  GAACAGGATAATTCAATGGGGTAAAGGATGGGATGGCAGCATAGAGGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGGATAATTCAATGGGGTAAAGGATGGGATGGCAGCATAGAGGAAG  200

seq1  GAAGATGAAGAGAAATAACTAATACTAAAGCCTTTTTGAAAAGCCATATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATGAAGAGAAATAACTAATACTAAAGCCTTTTTGAAAAGCCATATG  250

seq1  GAAACCTCCTACTATAGATATTTCTTAAAATATATAAATATTTTATATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCTCCTACTATAGATATTTCTTAAAATATATAAATATTTTATATAA  300

seq1  ATATAAGTTTAAAAAGAGTTACCATGTAGTGAGGGCACAATACCTCAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAGTTTAAAAAGAGTTACCATGTAGTGAGGGCACAATACCTCAATT  350

seq1  AGTCATGATATGTTATCAAATAAAATCCCCAGTACCAGGAAAGGATTGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATGATATGTTATCAAATAAAATCCCCAGTACCAGGAAAGGATTGCA  400

seq1  ACATTTTGAGTCATTGACTAATGGATTTCTATAGACACACCACCCAAGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTGAGTCATTGACTAATGGATTTCTATAGACACACCACCCAAGCA  450

seq1  TTATAGGTTATTACCAATGCTATTGGATTCCCTCTAAAACTTAATGGTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGGTTATTACCAATGCTATTGGATTCCCTCTAAAACTTAATGGTAA  500

seq1  TTTCTATTTTTAAGTTAGCCTAAAAGCTAGTGGACTTGAAAATGTGTACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTATTTTTAAGTTAGCCTAAAAGCTAGTGGACTTGAAAATGTGTACT  550

seq1  CATATA-TTCCTTTTTTAAAAAAATA-TTCCTAGTATTGGTTGACCTAAC  598
      |||||| ||| ||||||||||||||| |||||||||||||||||||||||
seq2  CATATATTTCTTTTTTTAAAAAAATATTTCCTAGTATTGGTTGACCTAAC  600

seq1  CCCCCTACCCTTTCATCTTTTAATTTCCCCAAGCTTTCTTAAATCTTTAA  648
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CCCCCTACCCTTTCATCTTTTTATTTCCCCAAGCTTTCTTAAATCTTTAA  650

seq1  CCCTTAGTTTATCTCCCTTTTTTCTTTATTATGTCTGTGTTCTACTATCA  698
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CCCTTAGTTTATCTCCC-TTTTTCTTTATTATGTCTGTGTTCTACTATCA  699

seq1  ACTTAAACTAAATTTCCCTCTCCTTGGTATCTAAATTATTGTTCTATTGC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAAACTAAATTTCCCTCTCCTTGGTATCTAAATTATTGTTCTATTGC  749

seq1  TGTGAAAAGAAACCATTATCAA-GGCAAATAATAGAAGAA-AACATTAAT  796
      |||||||||||||||||||||| ||||| ||||||||||| |||||||||
seq2  TGTGAAAAGAAACCATTATCAAGGGCAATTAATAGAAGAATAACATTAAT  799

seq1  TTTGGACCTACTTAAGGC  814
      ||||||||||||||||||
seq2  TTTGGACCTACTTAAGGC  817