BAC Information

Click to search

BAC

Clone NameB6Ng01-126K02
Chromosome18 (Build37)
Map Location 74,064,998 - 74,204,017
singlet/doubletdoublet
Overlap geneMapk4
Upstream geneLOC100043411, LOC100042955, Rkhd2, Smad4, Elac1, Me2, Mro
Downstream gene2810433K01Rik, Cxxc1, EG435570, Mbd1, Ccdc11, LOC628298, LOC668124, LOC668126, Myo5b, Acaa2, LOC672799, Lipg, Rpl17, BC031181, Dym
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-126K02.bB6Ng01-126K02.g
ACCDH928948DH928949
length1,120958
definitionDH928948|Mus musculus domesticus DNA, BAC clone: B6Ng01-126K02, 5' end.DH928949|Mus musculus domesticus DNA, BAC clone: B6Ng01-126K02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(74,202,896 - 74,204,017)(74,064,998 - 74,065,921)
sequence
gaattcaggcctcagtgctgggggaactcagtctggacaagcagaggttg
atatgagcagcctgtccctgtggggagcttgggctgacccgaagttgagt
gaagctgatgtgtgttgaagcagccgaggaaccaattggatttggcagct
cactgtctgcaggttggaaaatggacacacacaaaaatatgcacccgcca
tagacacaggaaacagtcccaggaatccctatgagagtgacgaggccacc
agggatgtggcctttacatcatcttgcccttgcgtcaccctccgcctctg
ctgagcattccagacttttcaggactacgactactctggtcctcttacgc
agatactggtttccaaggaagacgaagggcctcggaatgtttgggaaact
ctggagcagctgagtcataaaaaatgcagccatgcgaggggtgtttagaa
gggactggggtatcgtacccacttagcctagccgaggttggccaggaccc
ttttatccctttgtgtatttgtagagaacactgagttttcctggcgtacc
actagctagggtcacatttccttctttgaccttgagacagctgcgaagcc
ctgagtcacctcctggtggccacattgctgtacctcgtagcccattccct
ggtaatcccgagggcagtctcccagtgcagggcaagtaagatccagttgg
agcaacatcgcagttgcaaaccacatgcgcacaaaaggaaactgagctgt
gggttgcagcgagctaatagttggataagacaggtgcacaagagctgggc
tgtaggtgagttctcatgtatcccatccgagaagaaatcaacagtggtgg
atttcaccgccgtgcctcttgcttcagtctggtaatgaaaatttgatttg
tggtttcctccccggggctcttcatcacactgtaatttgatacattccaa
caagtgggctcttgaagaaaaatcaatcctgaccaggtcttcatcagcac
ccagattgtcttaacagcacccttgcagatgtctactcttcgtggcacct
tcctctgcgggctccctgtcgacgaatggttgcttcttggaagcttctag
aagcttctggaggggatgtg
gaattcccaacctgtggagaggtcacccccatggtagggctgtctgactc
aaaccatgtcatgtggcgaagtggattggcccctcacaaggtctgacttt
tctgagtcagtaggacctgagatacgggagacagatggtgcaccctctca
gcatctccaagcatggacaaaactggttagctcttctccttctcagttct
tcctctctataactctggggcctttggcagtcctgaagtcagggctgaga
gagcatctgtggtcctttttttgcctcacttgttcatctatactgagggg
ggtcctagaggtagactagcctggcctttgtcagcctgttcacctgaaca
caggatcacgtcaggacacttctgttacctacaaaacaaattcactccat
gacaatctcagcctgaccctggatcctgtcgtgcctgcagagactgactg
acacgttagcatcattgagaggttggaatgttgcaggtccaaggggcttg
ttacattctcttgggctagttctagcctccggaatagctgtgccttgctt
gcctctgtgtctgaagtcacatcttgcgattagcagacagaaacctttta
gaatctattaacctaacagaccactaacttccaccaacctagaagctaag
aatgccatcagatagcgttttggacctaaataaatctcctcccgtttggc
tgtactgcctctctgctgtacccaccaatggccttgattgacaacattct
ttgttctgtaaaactatacagcttcctgaaattgcttccatgttgggaca
tggaggtcagggtaaccctaaacctgtgttctcaggccatggccactgac
atagctcctgacaacttttttctgttccgtttaagataagatggtagaga
gaaggctcagcagttaagagcactgactgctctccgatgtcctgagttca
atcccagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_74202896_74204017
seq2: B6Ng01-126K02.b_45_1164 (reverse)

seq1  CACATCCCCCTCCAGAAGCCCTCCTAG-AGCTTCCAAGAGAGCACCCATT  49
      ||||| ||||||||||||  || |||| ||||||||||| |||| |||||
seq2  CACAT-CCCCTCCAGAAG--CTTCTAGAAGCTTCCAAGA-AGCAACCATT  46

seq1  CGTCGACAGGGGAGCCCCGCAGAGGGAAGGGTGCCACGGAGGAGGTGACA  99
      |||||||| ||||| ||||||||||  | |||||||| || |||  ||||
seq2  CGTCGACA-GGGAG-CCCGCAGAGG--AAGGTGCCAC-GAAGAGTAGACA  91

seq1  CCTGCAGGGGTGCTTGTTAGACAATCTGGGTGCTGATG-AGACCT-GTCA  147
       ||||| |||||||  | |||||||||||||||||||| |||||| ||||
seq2  TCTGCAAGGGTGCTGTTAAGACAATCTGGGTGCTGATGAAGACCTGGTCA  141

seq1  GGATTGATTTTTC-TCAAGAG-CCACTTGTTGGAGATGTATC-AATTACA  194
      ||||||||||||| ||||||| |||||||||||| ||||||| |||||||
seq2  GGATTGATTTTTCTTCAAGAGCCCACTTGTTGGA-ATGTATCAAATTACA  190

seq1  GTGTGATGAAGAGCCCC-GGGAGGAAACCACAAATCAAATTTTCATTACC  243
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GTGTGATGAAGAGCCCCGGGGAGGAAACCACAAATCAAATTTTCATTACC  240

seq1  AGACTGAAGCAAGAGGCACGGCGGTGAAATCCACCACTGTTGATTTCTTC  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGAAGCAAGAGGCACGGCGGTGAAATCCACCACTGTTGATTTCTTC  290

seq1  TCGGATGGGATACATGAGAACTCACCTACAGCCCAGCTCTTGTGCACCTG  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGATGGGATACATGAGAACTCACCTACAGCCCAGCTCTTGTGCACCTG  340

seq1  TCTTATCCAACTATTAGCTCGCTGCAACCCACAGCTCAGTTTCC-TTTGT  392
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TCTTATCCAACTATTAGCTCGCTGCAACCCACAGCTCAGTTTCCTTTTGT  390

seq1  GCGCATGTGGTTTGCAACTGCGATGTTGCTCCAACTGGATCTTACTTGCC  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCATGTGGTTTGCAACTGCGATGTTGCTCCAACTGGATCTTACTTGCC  440

seq1  CTGCACTGGGAGACTGCCCTCGGGATTACCAGGGAATGGGCTACGAGGTA  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCACTGGGAGACTGCCCTCGGGATTACCAGGGAATGGGCTACGAGGTA  490

seq1  CAGCAATGTGGCCACCAGGAGGTGACTCAGGGCTTCGCAGCTGTCTCAAG  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAATGTGGCCACCAGGAGGTGACTCAGGGCTTCGCAGCTGTCTCAAG  540

seq1  GTCAAAGAAGGAAATGTGACCCTAGCTAGTGGTACGCCAGGAAAACTCAG  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAAGAAGGAAATGTGACCCTAGCTAGTGGTACGCCAGGAAAACTCAG  590

seq1  TGTTCTCTACAAATACACAAAGGGATAAAAGGGTCCTGGCCAACCTCGGC  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTCTACAAATACACAAAGGGATAAAAGGGTCCTGGCCAACCTCGGC  640

seq1  TAGGCTAAGTGGGTACGATACCCCAGTCCCTTCTAAACACCCCTCGCATG  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCTAAGTGGGTACGATACCCCAGTCCCTTCTAAACACCCCTCGCATG  690

seq1  GCTGCATTTTTTATGACTCAGCTGCTCCAGAGTTTCCCAAACATTCCGAG  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCATTTTTTATGACTCAGCTGCTCCAGAGTTTCCCAAACATTCCGAG  740

seq1  GCCCTTCGTCTTCCTTGGAAACCAGTATCTGCGTAAGAGGACCAGAGTAG  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTTCGTCTTCCTTGGAAACCAGTATCTGCGTAAGAGGACCAGAGTAG  790

seq1  TCGTAGTCCTGAAAAGTCTGGAATGCTCAGCAGAGGCGGAGGGTGACGCA  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTAGTCCTGAAAAGTCTGGAATGCTCAGCAGAGGCGGAGGGTGACGCA  840

seq1  AGGGCAAGATGATGTAAAGGCCACATCCCTGGTGGCCTCGTCACTCTCAT  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCAAGATGATGTAAAGGCCACATCCCTGGTGGCCTCGTCACTCTCAT  890

seq1  AGGGATTCCTGGGACTGTTTCCTGTGTCTATGGCGGGTGCATATTTTTGT  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATTCCTGGGACTGTTTCCTGTGTCTATGGCGGGTGCATATTTTTGT  940

seq1  GTGTGTCCATTTTCCAACCTGCAGACAGTGAGCTGCCAAATCCAATTGGT  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTCCATTTTCCAACCTGCAGACAGTGAGCTGCCAAATCCAATTGGT  990

seq1  TCCTCGGCTGCTTCAACACACATCAGCTTCACTCAACTTCGGGTCAGCCC  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCGGCTGCTTCAACACACATCAGCTTCACTCAACTTCGGGTCAGCCC  1040

seq1  AAGCTCCCCACAGGGACAGGCTGCTCATATCAACCTCTGCTTGTCCAGAC  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCCCCACAGGGACAGGCTGCTCATATCAACCTCTGCTTGTCCAGAC  1090

seq1  TGAGTTCCCCCAGCACTGAGGCCTGAATTC  1122
      ||||||||||||||||||||||||||||||
seq2  TGAGTTCCCCCAGCACTGAGGCCTGAATTC  1120

seq1: chr18_74064998_74065921
seq2: B6Ng01-126K02.g_67_986

seq1  GAATTCCCAACCTGTGGAGAGGTCACCCCCATGGTAGGGCTGTCTGACTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCAACCTGTGGAGAGGTCACCCCCATGGTAGGGCTGTCTGACTC  50

seq1  AAACCATGTCATGTGGCGAAGTGGATTGGCCCCTCACAAGGTCTGACTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCATGTCATGTGGCGAAGTGGATTGGCCCCTCACAAGGTCTGACTTT  100

seq1  TCTGAGTCAGTAGGACCTGAGATACGGGAGACAGATGGTGCACCCTCTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGTCAGTAGGACCTGAGATACGGGAGACAGATGGTGCACCCTCTCA  150

seq1  GCATCTCCAAGCATGGACAAAACTGGTTAGCTCTTCTCCTTCTCAGTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTCCAAGCATGGACAAAACTGGTTAGCTCTTCTCCTTCTCAGTTCT  200

seq1  TCCTCTCTATAACTCTGGGGCCTTTGGCAGTCCTGAAGTCAGGGCTGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTCTATAACTCTGGGGCCTTTGGCAGTCCTGAAGTCAGGGCTGAGA  250

seq1  GAGCATCTGTGGTCCTTTTTTTGCCTCACTTGTTCATCTATACTGAGGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATCTGTGGTCCTTTTTTTGCCTCACTTGTTCATCTATACTGAGGGG  300

seq1  GGTCCTAGAGGTAGACTAGCCTGGCCTTTGTCAGCCTGTTCACCTGAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCTAGAGGTAGACTAGCCTGGCCTTTGTCAGCCTGTTCACCTGAACA  350

seq1  CAGGATCACGTCAGGACACTTCTGTTACCTACAAAACAAATTCACTCCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATCACGTCAGGACACTTCTGTTACCTACAAAACAAATTCACTCCAT  400

seq1  GACAATCTCAGCCTGACCCTGGATCCTGTCGTGCCTGCAGAGACTGACTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAATCTCAGCCTGACCCTGGATCCTGTCGTGCCTGCAGAGACTGACTG  450

seq1  ACACGTTAGCATCATTGAGAGGTTGGAATGTTGCAGGTCCAAGGGGCTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACGTTAGCATCATTGAGAGGTTGGAATGTTGCAGGTCCAAGGGGCTTG  500

seq1  TTACATTCTCTTGGGCTAGTTCTAGCCTCCGGAATAGCTGTGCCTTGCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATTCTCTTGGGCTAGTTCTAGCCTCCGGAATAGCTGTGCCTTGCTT  550

seq1  GCCTCTGTGTCTGAAGTCACATCTTGCGATTAGCAGACAGAAACCTTTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTGTGTCTGAAGTCACATCTTGCGATTAGCAGACAGAAACCTTTTA  600

seq1  GAATCTATTAACCTAACAGACCACTAACTTCCACCAACCTAGAAGCTAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTATTAACCTAACAGACCACTAACTTCCACCAACCTAGAAGCTAAG  650

seq1  AATGCCATCAGATAGCGTTTTGGACCTAAATAAATCTCCTCCCGTTTGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCCATCAGATAGCGTTTTGGACCTAAATAAATCTCCTCCCGTTTGGC  700

seq1  TGTACTGCCTCTCTGCTGTACCCACCAATGGCCTTGATTGACAACATTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTGCCTCTCTGCTGTACCCACCAATGGCCTTGATTGACAACATTCT  750

seq1  TTGTTCTGTAAAACTATACAGCTTCCTGAAATTGCTTCCATGTTGGGACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCTGTAAAACTATACAGCTTCCTGAAATTGCTTCCATGTTGGGACA  800

seq1  TGGAGGTCAGGGTAACCCTAAACCTGTGTTCTCAGGCCATGGCCACTGAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGTCAGGGTAACCCTAAACCTGTGTTCTCAGGCCATGGCCACTGAC  850

seq1  AATAGCTCCTGAACAAACTTTTTCCTGTTCCGTTTAAGATAAGAATGGTA  900
       |||||||||||   |||||||| ||||||||||||||||||| ||||||
seq2  -ATAGCTCCTGA--CAACTTTTTTCTGTTCCGTTTAAGATAAG-ATGGTA  896

seq1  GAGAGAAGGCTCAGCAGTTAAGAG  924
      ||||||||||||||||||||||||
seq2  GAGAGAAGGCTCAGCAGTTAAGAG  920