BAC Information

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BAC

Clone NameB6Ng01-132J19
Chromosome18 (Build37)
Map Location 89,665,073 - 89,666,113
singlet/doubletsinglet
Overlap geneDok6
Upstream geneLOC665497, LOC100040003, LOC623208, Socs6, Rttn, Cd226
Downstream geneLOC383320, LOC620693, Eif3s6-ps2, LOC665526
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-132J19.bB6Ng01-132J19.g
ACCDH933371DH933372
length1,1381,036
definitionDH933371|Mus musculus domesticus DNA, BAC clone: B6Ng01-132J19, 5' end.DH933372|Mus musculus domesticus DNA, BAC clone: B6Ng01-132J19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagagggacactcctccattgttggtg
ggattgcaggcttgtacaaccactatggaaatcagtctggcagttcctca
gaaaattggacatagtactaccggaggatccagcaataactctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatacaatttggtaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcctctccttagaattgggaa
caaaacatccatggaaggagttacaaagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatatactagcaagattttatcgaaa
ggacccagatgaagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacaggctcccaa
tgagagctagagaagtacccagagctaaagggatctgcaccctatagtga
tcacatatgactacagtacccgagctcttgactctagctgcaatgtatca
aagatgctagtcgcatcactgaagaaggcatgactgcacttattgcctca
gtacaggaacccaggccaaggggatgcggggtaaggaa
gaattctttgaagactttgaaaaatagccaaaaaggaggcagcatctgac
atatatatctagatatatgcatatgtttagatgtttttgatcagtcagca
agaaatgatttggtttctcatcttagcaacaaagaaaacagtcttttaat
acactatgagacaatgatgcttgttaacaatattgctctttcgcaacaag
attgtaatcacccaaggatctcataacatgcttttaccggtgctactaat
ttatgttacctgtaactccttaaattcttgttaaaaagcaggaccaagtt
taaccaataatattaactgtatcactaaaatgattctaccttcatggaac
tagatttgttgcttgtaatgataattttgtggttagataaaatgggttga
tgatccattaaaattttacaaatataacctaaaacacattgaacaatata
ttactagaagaatcaggcttcattgacaatactgatcaagtgtatgaaac
tctagttgtcatgagatagcagatactatgaatttaaacaatattgtatt
aggtaaacacaaaaaccagcttcctaccaatagacacactagcaaaataa
tctatgaatttaatatccagataagccaaatgtgttaatataaactgtaa
tctatatcaaacatcaaagaagattaaaagaatgtattcattttaaaagc
catatgtacaaaacataataactccataagttttttatacatgtggcttt
atcactaataagaaaccaggagcctgggttgaaccttggaactttatata
gctgctacctcaccactgaaattttcttaataattgtgctcctaagcttt
cttgtccaattttattaattctaacaaaattccatatatgaatttggata
tattttatcccctcctcaactcttccaagttcatcttgcttccataaaca
caactttgtgactccattatttttctggctataatttttaatttgttctg
ctcttatctccttgtcgtgggggctttcacaggact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_89665073_89666113
seq2: B6Ng01-132J19.g_66_1101

seq1  GAATTCTTTGATGACTTTGAAAAATAGCCAAAAAGGAGGCAGCATCTGAC  50
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGAAGACTTTGAAAAATAGCCAAAAAGGAGGCAGCATCTGAC  50

seq1  ATATATATCTAGATATATGCATATGTTTAGATGTTTTTGATCAGTCAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATCTAGATATATGCATATGTTTAGATGTTTTTGATCAGTCAGCA  100

seq1  AGAAATGATTTGGTTTCTCATCTTAGCAACAAAGAAAACAGTCTTTTAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGATTTGGTTTCTCATCTTAGCAACAAAGAAAACAGTCTTTTAAT  150

seq1  ACACTATGAGACAATGATGCTTGTTAACAATATTGCTCTTTCGCAACAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTATGAGACAATGATGCTTGTTAACAATATTGCTCTTTCGCAACAAG  200

seq1  ATTGTAATCACCCAAGGATCTCATAACATGCTTTTACCGGTGCTACTAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTAATCACCCAAGGATCTCATAACATGCTTTTACCGGTGCTACTAAT  250

seq1  TTATGTTACCTGTAACTCCTTAAATTCTTGTTAAAAAGCAGGACCAAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTTACCTGTAACTCCTTAAATTCTTGTTAAAAAGCAGGACCAAGTT  300

seq1  TAACCAATAATATTAACTGTATCACTAAAATGATTCTACCTTCATGGAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCAATAATATTAACTGTATCACTAAAATGATTCTACCTTCATGGAAC  350

seq1  TAGATTTGTTGCTTGTAATGATAATTTTGTGGTTAGATAAAATGGGTTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTTGTTGCTTGTAATGATAATTTTGTGGTTAGATAAAATGGGTTGA  400

seq1  TGATCCATTAAAATTTTACAAATATAACCTAAAACACATTGAACAATATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCCATTAAAATTTTACAAATATAACCTAAAACACATTGAACAATATA  450

seq1  TTACTAGAAGAATCAGGCTTCATTGACAATACTGATCAAGTGTATGAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTAGAAGAATCAGGCTTCATTGACAATACTGATCAAGTGTATGAAAC  500

seq1  TCTAGTTGTCATGAGATAGCAGATACTATGAATTTAAACAATATTGTATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGTTGTCATGAGATAGCAGATACTATGAATTTAAACAATATTGTATT  550

seq1  AGGTAAACACAAAAACCAGCTTCCTACCAATAGACACACTAGCAAAATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAAACACAAAAACCAGCTTCCTACCAATAGACACACTAGCAAAATAA  600

seq1  TCTATGAATTTAATATCCAGATAAGCCAAATGTGTTAATATAAACTGTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGAATTTAATATCCAGATAAGCCAAATGTGTTAATATAAACTGTAA  650

seq1  TCTATATCAAACATCAAAGAAGATTAAAAGAATGTATTCA-TTTAAAAGC  699
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TCTATATCAAACATCAAAGAAGATTAAAAGAATGTATTCATTTTAAAAGC  700

seq1  CATATGTACAAAACATAATAACTCCATAAG-TTTTTATACATGTGGCTTT  748
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CATATGTACAAAACATAATAACTCCATAAGTTTTTTATACATGTGGCTTT  750

seq1  ATCACTAATAAGAAACCAGGAGCCTGGGTTGAACCTTGGAACTTTATATA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTAATAAGAAACCAGGAGCCTGGGTTGAACCTTGGAACTTTATATA  800

seq1  GCTGCTACCTCACCACTGAAATTTTCTTAATAA-TGTGCTCCTAAGCTTT  847
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GCTGCTACCTCACCACTGAAATTTTCTTAATAATTGTGCTCCTAAGCTTT  850

seq1  CTTTGTCCAATTTTATTAATTCTTACAAAATTCCATATATTGAATTTTGA  897
      | ||||||||||||||||||||| ||||||||||||||| ||||||| ||
seq2  C-TTGTCCAATTTTATTAATTCTAACAAAATTCCATATA-TGAATTTGGA  898

seq1  TTATATTTATTCCCCTCCTCCAACTCTTCCCAGGTTCATCTTGCTTCCAT  947
       |||||||  ||||||||| |||||||| ||| |||||||||||||||||
seq2  -TATATTTTATCCCCTCCT-CAACTCTT-CCAAGTTCATCTTGCTTCCAT  945

seq1  AAACACCAAACTTTGTGACCTCATTATTTTTCTGTCTATTATTTTTTAAT  997
      ||||||  |||||||||||  ||||||||||||| ||| || ||||||||
seq2  AAACAC--AACTTTGTGACTCCATTATTTTTCTGGCTA-TAATTTTTAAT  992

seq1  TTGTTCTGCTCTTATACTCTTGGCTGTGTGGCTTTCACAGGACT  1041
      |||||||||||||||   |||| |   | |||||||||||||||
seq2  TTGTTCTGCTCTTATCTCCTTGTCGTGGGGGCTTTCACAGGACT  1036