BAC Information

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BAC

Clone NameB6Ng01-133B03
Chromosome18 (Build37)
Map Location 32,087,093 - 32,237,987
singlet/doubletdoublet
Overlap geneLims2, Gpr17, Myo7b, Iws1
Upstream geneRit2, EG666130, Syt4, LOC383420, Slc25a46, Sap130, LOC640549, Ammecr1l, Polr2d, EG626327, Wdr33, Sft2d3
Downstream geneProc, LOC546710, Map3k2, Ercc3, Bin1, Gypc, LOC100041160, LOC100041170, Tslp, Wdr36, Camk4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-133B03.bB6Ng01-133B03.g
ACCDH933719DH933720
length1,139830
definitionDH933719|Mus musculus domesticus DNA, BAC clone: B6Ng01-133B03, 5' end.DH933720|Mus musculus domesticus DNA, BAC clone: B6Ng01-133B03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,236,843 - 32,237,987)(32,087,093 - 32,087,923)
sequence
gaattcactctgtagaccaggctggcttccatctcaacagatcctcctgc
ctctctgcctctcaagtgctaggattaagggcacctaccactaccacctg
ttctatcatttttttaaatgagctttataaatatccagacactcatccat
tatgtggcatgaaaggatgaaatagagcaaccacttcagtcaagaaagag
ctagttctgggcatgtaagcacacatcttcaatctcagaacctgggaaac
agaagcagtcagatctctaggagcacaaggctagcctggtctaaatagtg
cagtcccaggccaagcagagctacagagtgaggccctgtcccaatacaaa
caaaaccaaaaagaaaaaaagagaaagaactactcccaagagactctagc
aggagacaaagacattatagaatttgagaagatgatattagaaacagaaa
ctatgtagctaaaaggtttaaaagttatcaaaatattttagaattttagc
agtcaaactgaaaactaaactctaagaaaaaaacagaaatcaaacatgag
tataaaaaaacaacaaattgtcataaaatttcttaagaaacattgttttt
attcaaacagggtctcaagtatttcagattggcctcaggcttgctttgta
gctgaggctagataaccttgaacttctgatccttcctgcttctacttcct
gagagctgggattataggcatgcacacctacatctaggttatatggtagt
aggcattgtacttagggtcttataatgttctaagcaagcactcttatcta
ctcagctagatacctagcccaaatgtcatcttcttaaggcaaaaaattcc
cagttagaatggtcagaaaaaactgagcactctgagggtctgtgtcccaa
gctttctttgtaataattcatgctccagttataaatatgggctatctatc
ataaatatcttgttcattttagcattcaaatagtattcacattcttacag
actagctccatagcatataacagaaataactgtcctttggtgtagcctag
ccttaactgctggagcaatctccttagcctcacctgaacattcctaagtt
gaaagcaactgctgtcggcatgaattgtattatgaggag
gaattctattgtgttgacaagattaatgagcactctggaagggctacaaa
ataccgctcaatctcttcatgtaggactctagataggggctggaggaagc
caaccaaggctttttttaaaaaaatttttttaattaggtattttcctcat
ttacatttccaatgctatcccaaaagtcccccataccctcccccccaacc
gaggctcttagagttctcgtcatcttcattttactggtctagcatggtgc
ctagaattccacgagtctttgagcatccctgaacagcactgggctcaggc
ctggcgagaggaaacatggttgggataatcagggggtctcttctgtcttc
tctggggtgcatctgccctaagccgctgctctgcccctgcatttcctcct
gggaccaccccttatgtcactccgtcctgtccttgacctcggacatctca
gagcccacctgggctcttgtccccgagtcacagcactcagtatgtgatct
aagcctctctctgagtgcccaacatctccatctcctcaggctagagacag
tgcaaacaccactcctgtccctcggcttcacagagctgggcgtttctcct
cctctcagggcagctactactgccctgctgccttctgggctcagcctgtc
tctagggtacctgttccccttcctctctggtaggctgggtatggaacact
cactctctgggcctgcccttacccatctcagatcgttccctgtcctggaa
atagaaaccagcgttctctagcttcttagatctgtggtgccctgcagggt
cgtgggtgtaggggaaaaaggggagtggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_32236843_32237987
seq2: B6Ng01-133B03.b_46_1184 (reverse)

seq1  CTCCTCATAATACAAATCATTGCTGTACAGCAGTTTGCTTTTCACTTTAA  50
      ||||||||||||||| ||| ||| | ||||||| |||| |||||  ||| 
seq2  CTCCTCATAATACAATTCA-TGCCG-ACAGCAG-TTGC-TTTCAACTTAG  46

seq1  GAATG-TCAGTTGAGGCT-AGGAGATTGCT-CAGCAGTTAAAGGCTAAGG  97
      ||||| |||| ||||||| ||||||||||| |||||||| |||||| |||
seq2  GAATGTTCAGGTGAGGCTAAGGAGATTGCTCCAGCAGTT-AAGGCT-AGG  94

seq1  CTTACAACCAAAAGGACAGTTATTTCTGTTATATGCTATGGAGCTAGTCT  147
      | ||||  | ||||||||||||||||||||||||||||||||||||||||
seq2  C-TACA--CCAAAGGACAGTTATTTCTGTTATATGCTATGGAGCTAGTCT  141

seq1  GTAAGAATGTGAATACTATTTGAATGCTAAAATGAACAAGATATTTATGA  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGAATGTGAATACTATTTGAATGCTAAAATGAACAAGATATTTATGA  191

seq1  TAGATAGCCAATATTTATAACTGGAGCATGAATTATTACAAAGAAAGCTT  247
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TAGATAGCCCATATTTATAACTGGAGCATGAATTATTACAAAGAAAGCTT  241

seq1  GGGACACAGACCCTCAGAGTGCTCAGTTTTTTCTGACCATTCTAACTGGG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACACAGACCCTCAGAGTGCTCAGTTTTTTCTGACCATTCTAACTGGG  291

seq1  AATTTTTTGCCTTAAGAAGATGACATTTGGGCTAGGTATCTAGCTGAGTA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTTGCCTTAAGAAGATGACATTTGGGCTAGGTATCTAGCTGAGTA  341

seq1  GATAAGAGTGCTTGCTTAGAACATTATAAGACCCTAAGTACAATGCCTAC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAGAGTGCTTGCTTAGAACATTATAAGACCCTAAGTACAATGCCTAC  391

seq1  TACCATATAACCTAGATGTAGGTGTGCATGCCTATAATCCCAGCTCTCAG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCATATAACCTAGATGTAGGTGTGCATGCCTATAATCCCAGCTCTCAG  441

seq1  GAAGTAGAAGCAGGAAGGATCAGAAGTTCAAGGTTATCTAGCCTCAGCTA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTAGAAGCAGGAAGGATCAGAAGTTCAAGGTTATCTAGCCTCAGCTA  491

seq1  CAAAGCAAGCCTGAGGCCAATCTGAAATACTTGAGACCCTGTTTGAATAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCAAGCCTGAGGCCAATCTGAAATACTTGAGACCCTGTTTGAATAA  541

seq1  AAACAATGTTTCTTAAGAAATTTTATGACAATTTGTTGTTTTTTTATACT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAATGTTTCTTAAGAAATTTTATGACAATTTGTTGTTTTTTTATACT  591

seq1  CATGTTTGATTTCTGTTTTTTTCTTAGAGTTTAGTTTTCAGTTTGACTGC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTTGATTTCTGTTTTTTTCTTAGAGTTTAGTTTTCAGTTTGACTGC  641

seq1  TAAAATTCTAAAATATTTTGATAACTTTTAAACCTTTTAGCTACATAGTT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTCTAAAATATTTTGATAACTTTTAAACCTTTTAGCTACATAGTT  691

seq1  TCTGTTTCTAATATCATCTTCTCAAATTCTATAATGTCTTTGTCTCCTGC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTTCTAATATCATCTTCTCAAATTCTATAATGTCTTTGTCTCCTGC  741

seq1  TAGAGTCTCTTGGGAGTAGTTCTTTCTCTTTTTTTCTTTTTGGTTTTGTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGTCTCTTGGGAGTAGTTCTTTCTCTTTTTTTCTTTTTGGTTTTGTT  791

seq1  TGTATTGGGACAGGGCCTCACTCTGTAGCTCTGCTTGGCCTGGGACTGCA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTGGGACAGGGCCTCACTCTGTAGCTCTGCTTGGCCTGGGACTGCA  841

seq1  CTATTTAGACCAGGCTAGCCTTGTGCTCCTAGAGATCTGACTGCTTCTGT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTAGACCAGGCTAGCCTTGTGCTCCTAGAGATCTGACTGCTTCTGT  891

seq1  TTCCCAGGTTCTGAGATTGAAGATGTGTGCTTACATGCCCAGAACTAGCT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCAGGTTCTGAGATTGAAGATGTGTGCTTACATGCCCAGAACTAGCT  941

seq1  CTTTCTTGACTGAAGTGGTTGCTCTATTTCATCCTTTCATGCCACATAAT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTGACTGAAGTGGTTGCTCTATTTCATCCTTTCATGCCACATAAT  991

seq1  GGATGAGTGTCTGGATATTTATAAAGCTCATTTAAAAAAATGATAGAACA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGAGTGTCTGGATATTTATAAAGCTCATTTAAAAAAATGATAGAACA  1041

seq1  GGTGGTAGTGGTAGGTGCCCTTAATCCTAGCACTTGAGAGGCAGAGAGGC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGTAGTGGTAGGTGCCCTTAATCCTAGCACTTGAGAGGCAGAGAGGC  1091

seq1  AGGAGGATCTGTTGAGATGGAAGCCAGCCTGGTCTACAGAGTGAATTC  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGATCTGTTGAGATGGAAGCCAGCCTGGTCTACAGAGTGAATTC  1139

seq1: chr18_32087093_32087923
seq2: B6Ng01-133B03.g_68_897

seq1  GAATTCTATTGTGTTGACAAGATTAATGAGCACTCTGGAAGGGCTACAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATTGTGTTGACAAGATTAATGAGCACTCTGGAAGGGCTACAAA  50

seq1  ATACCGCTCAATCTCTTCATGTAGGACTCTAGATAGGGGCTGGAGGAAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCGCTCAATCTCTTCATGTAGGACTCTAGATAGGGGCTGGAGGAAGC  100

seq1  CAACCAAGGCTTTTTTTAAAAAAATTTTTTTAATTAGGTATTTTCCTCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCAAGGCTTTTTTTAAAAAAATTTTTTTAATTAGGTATTTTCCTCAT  150

seq1  TTACATTTCCAATGCTATCCCAAAAGTCCCCCATACCCTCCCCCCCAACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATTTCCAATGCTATCCCAAAAGTCCCCCATACCCTCCCCCCCAACC  200

seq1  GAGGCTCTTAGAGTTCTCGTCATCTTCATTTTACTGGTCTAGCATGGTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTCTTAGAGTTCTCGTCATCTTCATTTTACTGGTCTAGCATGGTGC  250

seq1  CTAGAATTCCACGAGTCTTTGAGCATCCCTGAACAGCACTGGGCTCAGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAATTCCACGAGTCTTTGAGCATCCCTGAACAGCACTGGGCTCAGGC  300

seq1  CTGGCGAGAGGAAACATGGTTGGGATAATCAGGGGGTCTCTTCTGTCTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCGAGAGGAAACATGGTTGGGATAATCAGGGGGTCTCTTCTGTCTTC  350

seq1  TCTGGGGTGCATCTGCCCTAAGCCGCTGCTCTGCCCCTGCATTTCCTCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGGTGCATCTGCCCTAAGCCGCTGCTCTGCCCCTGCATTTCCTCCT  400

seq1  GGGACCACCCCTTATGTCACTCCGTCCTGTCCTTGACCTCGGACATCTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACCACCCCTTATGTCACTCCGTCCTGTCCTTGACCTCGGACATCTCA  450

seq1  GAGCCCACCTGGGCTCTTGTCCCCGAGTCACAGCACTCAGTATGTGATCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCCACCTGGGCTCTTGTCCCCGAGTCACAGCACTCAGTATGTGATCT  500

seq1  AAGCCTCTCTCTGAGTGCCCAACATCTCCATCTCCTCAGGCTAGAGACAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTCTCTCTGAGTGCCCAACATCTCCATCTCCTCAGGCTAGAGACAG  550

seq1  TGCAAACACCACTCCTGTCCCTCGGCTTCACAGAGCTGGGCGTTTCTCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAACACCACTCCTGTCCCTCGGCTTCACAGAGCTGGGCGTTTCTCCT  600

seq1  CCTCTCAGGGCAGCTACTACTGCCCTGCTGCCTTCTGGGCTCAGCCTGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCAGGGCAGCTACTACTGCCCTGCTGCCTTCTGGGCTCAGCCTGTC  650

seq1  TCTAGGGTACCTGTTCCCCTTCCTCTCTGGTAGGCTGGGTATGGAACACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGGTACCTGTTCCCCTTCCTCTCTGGTAGGCTGGGTATGGAACACT  700

seq1  CACTCTCTGGGCCTGCCCTTACCCATCTCAGATCGTTCCCTGTCCTTGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CACTCTCTGGGCCTGCCCTTACCCATCTCAGATCGTTCCCTGTCC-TGGA  749

seq1  AATAGAAACCAGCGTTCCCTAGCTTCTTAGATCTGTGGTGCCCTGCAGGG  800
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AATAGAAACCAGCGTTCTCTAGCTTCTTAGATCTGTGGTGCCCTGCAGGG  799

seq1  TCGTGGGTGTAGGGGAAAGAGGGGAGTGGGA  831
      |||||||||||||||||| ||||||||||||
seq2  TCGTGGGTGTAGGGGAAAAAGGGGAGTGGGA  830