BAC Information

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BAC

Clone NameB6Ng01-134K01
Chromosome18 (Build37)
Map Location 27,376,160 - 27,451,532
singlet/doubletdoublet
Overlap genenone
Upstream geneEG665977
Downstream geneEG665646, EG271505
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-134K01.bB6Ng01-134K01.g
ACCDH934878DH934879
length1,1331,027
definitionDH934878|Mus musculus domesticus DNA, BAC clone: B6Ng01-134K01, 5' end.DH934879|Mus musculus domesticus DNA, BAC clone: B6Ng01-134K01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(27,376,160 - 27,377,289)(27,450,498 - 27,451,532)
sequence
gaattcaaaatggaaagaaaggagttgacataaagcctctatttcttcta
tttaagtaacaatttaaatatgaactcaatgtcctaactcttcggaaaac
tttccaatgttaattcttaagtttgtcctggtacaggaaattgtctgaca
aagtagccatgtatgtgatatatatgtatgtgtagctcctttttccattc
ttctattcttcgttcattccttcctcttcagcttttataactcatgcagt
atatagtcttcttacaatgtcagatggtgaagtaaaaacataattccttc
tggacacacaaagcagaaagttcccaagttattcagaggaatacatcctt
taaggcaaaactctactctactccctttctcaagctctgtctttctgata
attgcatccttcctcggctctggtgttattgttgaaaaccatatatgtgc
atctgttgcagaactactgtccaccatttttatttctagagatctccaca
atttctcccttccttttggtagactcccatagtcactcagttagacaatt
gctaaaatcctctacaaatattgctttatttctcaatactacaaacatta
tttcctcattcttgtctccttttgccttatcatccatttctctcattttc
tctttctattttatcttgtgctccttgcttctctttttttctccctgtca
tcatgccctgtgaaaagtagatgttctaaatgcacaaatcctgttttctg
tcatccctcttctgctgcaagaacagcaccaatgctacctgacacatcca
tagctatatgtggaatggacaaaggagtgaatccatgaatgaatgcatga
acctattctctaagagccagctttgtgaagaggagcagcatccaatgctg
gccatctgttctggttctgggtgtgtgaaaggcttacccttgtcactgcc
ttacctcaccccccctccccactgacagtgatggaagttgacaaaatgtc
agctgaccctattgattatgcatgatcttattagcaaaccactggcagca
tgaacttatactctcactggcaaagctgtgaaatatagaagaaccagaca
ctggtcacctggaggttagggaaacaggcggat
gaattctgtgttctaactctacatgatgtaaaagcataactaggaagaat
aaaaggcaagaaaaactcccttggggagagttattctgactgtttttatt
ttttctgctttcctcatctaaacatgttttctcaccaacttaacatttta
gatgatcatttttattatttatgatattttgctgtgattttccccactac
attgtaaaatatacatgtttggggaactgctgcttaaccttagttcatca
tttacagtttgatgcattaccagttcagcacatactgatgcaactaatta
aacaaaagtaaactcatatgaagtttcattattattataattgatttgta
acagagtaatgccaccttatctgttactttgttgacaaattaagttaagt
atttcttatttttattgcattccttacagattatttctcacttgcaaaat
ttttttttcactttttttcttttctttttggtcttctgcatagagaaata
ttgtaaattaatgcatttaggatttgctttgtttctgttgtggttaaatg
tttaattgaaaaagaataatttataatatctaattgccttttccaagatc
aattataccaaattaatactgggcacagacaggaaattcactgcagtcct
gccagactgggtcactttattcaaacagtgcctagaagcacatctggatg
gggagaggaggattatactaataagcaggggaggaaaggaatgtgatagt
atgcaaggaagggcaggagtatgctaataagcagaggagggaaggagtat
gctaatacgtaaggaagggggagtactttgcttataaacaagaaatggga
ggataaataataagcatagaagagaaaagtatgcaaatatttgaggaaag
gagacatggtgagagttacaagttttatgtcagccacagggtcacatcac
tattgcaaatgggttaattaagtcagaaaaagatagtccccatgttgtgt
tggaagaaaagaaacataactttacag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_27376160_27377289
seq2: B6Ng01-134K01.b_45_1177

seq1  GAATTCAAAATGGAAAGAAAGGAGTTGACATAAAGCCTCTATTTCTTCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAATGGAAAGAAAGGAGTTGACATAAAGCCTCTATTTCTTCTA  50

seq1  TTTAAGTAACAATTTAAATATGAACTCAATGTCCTAACTCTTCGGAAAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGTAACAATTTAAATATGAACTCAATGTCCTAACTCTTCGGAAAAC  100

seq1  TTTCCAATGTTAATTCTTAAGTTTGTCCTGGTACAGGAAATTGTCTGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAATGTTAATTCTTAAGTTTGTCCTGGTACAGGAAATTGTCTGACA  150

seq1  AAGTAGCCATGTATGTGATATATATGTATGTGTAGCTCCTTTTTCCATTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGCCATGTATGTGATATATATGTATGTGTAGCTCCTTTTTCCATTC  200

seq1  TTCTATTCTTCGTTCATTCCTTCCTCTTCAGCTTTTATAACTCATGCAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATTCTTCGTTCATTCCTTCCTCTTCAGCTTTTATAACTCATGCAGT  250

seq1  ATATAGTCTTCTTACAATGTCAGATGGTGAAGTAAAAACATAATTCCTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGTCTTCTTACAATGTCAGATGGTGAAGTAAAAACATAATTCCTTC  300

seq1  TGGACACACAAAGCAGAAAGTTCCCAAGTTATTCAGAGGAATACATCCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACACACAAAGCAGAAAGTTCCCAAGTTATTCAGAGGAATACATCCTT  350

seq1  TAAGGCAAAACTCTACTCTACTCCCTTTCTCAAGCTCTGTCTTTCTGATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGCAAAACTCTACTCTACTCCCTTTCTCAAGCTCTGTCTTTCTGATA  400

seq1  ATTGCATCCTTCCTCGGCTCTGGTGTTATTGTTGAAAACCATATATGTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCATCCTTCCTCGGCTCTGGTGTTATTGTTGAAAACCATATATGTGC  450

seq1  ATCTGTTGCAGAACTACTGTCCACCATTTTTATTTCTAGAGATCTCCACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTTGCAGAACTACTGTCCACCATTTTTATTTCTAGAGATCTCCACA  500

seq1  ATTTCTCCCTTCCTTTTGGTAGACTCCCATAGTCACTCAGTTAGACAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTCCCTTCCTTTTGGTAGACTCCCATAGTCACTCAGTTAGACAATT  550

seq1  GCTAAAATCCTCTACAAATATTGCTTTATTTCTCAATACTACAAACATTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAAATCCTCTACAAATATTGCTTTATTTCTCAATACTACAAACATTA  600

seq1  TTTCCTCATTCTTGTCTCCTTTTGCCTTATCATCCATTTCTCTCATTTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTCATTCTTGTCTCCTTTTGCCTTATCATCCATTTCTCTCATTTTC  650

seq1  TCTTTCTATTTTATCTTGTGCTCCTTGCTTCTCTTTTTTTCTCCCTGTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTATTTTATCTTGTGCTCCTTGCTTCTCTTTTTTTCTCCCTGTCA  700

seq1  TCATGCCCTGTGAAAAGTAGATGTTCTAAATGCACAAATCCTGTTTTCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGCCCTGTGAAAAGTAGATGTTCTAAATGCACAAATCCTGTTTTCTG  750

seq1  TCATCCCTCTTCTGCTGCAAGAACAGCACCAATGCTACCTGACACATCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCCCTCTTCTGCTGCAAGAACAGCACCAATGCTACCTGACACATCCA  800

seq1  TAGCTATATGTGGAATGGACAAAGGAGTGAATCCATGAATGAATGCATGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTATATGTGGAATGGACAAAGGAGTGAATCCATGAATGAATGCATGA  850

seq1  ACCTATTCTCTAAGAGCCAGCTTTGTGAAGAGGAGCAGCATCCAATGCTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTATTCTCTAAGAGCCAGCTTTGTGAAGAGGAGCAGCATCCAATGCTG  900

seq1  GCCATCTGTTCTGGTTCTGGGTGTGTGACAGGCTTACCCTTGTCACTGCC  950
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GCCATCTGTTCTGGTTCTGGGTGTGTGAAAGGCTTACCCTTGTCACTGCC  950

seq1  TTACCTCA-CCCCCCTCCCCACTGACAGTGATGG-AGTTGACAAGATGTC  998
      |||||||| ||||||||||||||||||||||||| ||||||||| |||||
seq2  TTACCTCACCCCCCCTCCCCACTGACAGTGATGGAAGTTGACAAAATGTC  1000

seq1  AGCTGACCCTTATTGATTATGCATGATCTTATTAGCAAAACCACTGGCCA  1048
      ||||||||| |||||||||||||||||||||||||| |||||||||| ||
seq2  AGCTGACCC-TATTGATTATGCATGATCTTATTAGC-AAACCACTGG-CA  1047

seq1  GCATGACCTAAT--CCTCACTGGGCAAGGCTGTG--ATATATGAGGACCA  1094
      |||||| || ||   |||||| ||||| ||||||  |||||  || ||||
seq2  GCATGAACTTATACTCTCACT-GGCAAAGCTGTGAAATATAGAAGAACCA  1096

seq1  G-CACTTTGTCA-CTTGAGGTTAGGCAAACAGGCGGAT  1130
      | ||| | |||| || ||||||||| ||||||||||||
seq2  GACAC-TGGTCACCTGGAGGTTAGGGAAACAGGCGGAT  1133

seq1: chr18_27450498_27451532
seq2: B6Ng01-134K01.g_68_1094 (reverse)

seq1  CTGTAAAGTTACTGTTTTTCTCTCCTACCAACACACATTGGGGACTAATC  50
      |||||||||||   | ||||| | || ||||||||   |||||||| |||
seq2  CTGTAAAGTTA---TGTTTCTTTTCTTCCAACACAACATGGGGACT-ATC  46

seq1  TTTCTCTGACTTAATTAACCCATTTGCCATTGGTGATGTTGACCCCTGTG  100
      ||| |||||||||||||||||||||| || | |||||| ||| |||||||
seq2  TTTTTCTGACTTAATTAACCCATTTG-CAATAGTGATG-TGA-CCCTGTG  93

seq1  GCTGACATAAAACTTGTAACTCTCACCATGTCTCCTTTCCTCAAATATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGACATAAAACTTGTAACTCTCACCATGTCTCCTTTCCTCAAATATTT  143

seq1  GCATACTTTTCTCCTTCTATGCTTATTATTTTATCCTCCCATTTCTTGTT  200
      |||||||||||| ||||||||||||||| |||||||||||||||||||||
seq2  GCATACTTTTCT-CTTCTATGCTTATTA-TTTATCCTCCCATTTCTTGTT  191

seq1  TATTAGCAAAGTACT-CCCCTTCCTTACGTATTAGCATACTCCTTCCCTC  249
      ||| ||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TATAAGCAAAGTACTCCCCCTTCCTTACGTATTAGCATACTCCTTCCCTC  241

seq1  CTCTGCTTATTAGCATACTCCTGCCCTTCCTTGCATACTATCACATTCCT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCTTATTAGCATACTCCTGCCCTTCCTTGCATACTATCACATTCCT  291

seq1  TTCCTCCCCTGCTTATTAGTATAATCCTCCTCTCCCCATCCAGATGTGCT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCCCCTGCTTATTAGTATAATCCTCCTCTCCCCATCCAGATGTGCT  341

seq1  TCTAGGCACTGTTTGAATAAAGTGACCCAGTCTGGCAGGACTGCAGTGAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGCACTGTTTGAATAAAGTGACCCAGTCTGGCAGGACTGCAGTGAA  391

seq1  TTTCCTGTCTGTGCCCAGTATTAATTTGGTATAATTGATCTTGGAAAAGG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTGTCTGTGCCCAGTATTAATTTGGTATAATTGATCTTGGAAAAGG  441

seq1  CAATTAGATATTATAAATTATTCTTTTTCAATTAAACATTTAACCACAAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTAGATATTATAAATTATTCTTTTTCAATTAAACATTTAACCACAAC  491

seq1  AGAAACAAAGCAAATCCTAAATGCATTAATTTACAATATTTCTCTATGCA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACAAAGCAAATCCTAAATGCATTAATTTACAATATTTCTCTATGCA  541

seq1  GAAGACCAAAAAGAAAAGAAAAAAAGTGAAAAAAAAATTTTGCAAGTGAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACCAAAAAGAAAAGAAAAAAAGTGAAAAAAAAATTTTGCAAGTGAG  591

seq1  AAATAATCTGTAAGGAATGCAATAAAAATAAGAAATACTTAACTTAATTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATCTGTAAGGAATGCAATAAAAATAAGAAATACTTAACTTAATTT  641

seq1  GTCAACAAAGTAACAGATAAGGTGGCATTACTCTGTTACAAATCAATTAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAACAAAGTAACAGATAAGGTGGCATTACTCTGTTACAAATCAATTAT  691

seq1  AATAATAATGAAACTTCATATGAGTTTACTTTTGTTTAATTAGTTGCATC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATAATGAAACTTCATATGAGTTTACTTTTGTTTAATTAGTTGCATC  741

seq1  AGTATGTGCTGAACTGGTAATGCATCAAACTGTAAATGATGAACTAAGGT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGTGCTGAACTGGTAATGCATCAAACTGTAAATGATGAACTAAGGT  791

seq1  TAAGCAGCAGTTCCCCAAACATGTATATTTTACAATGTAGTGGGGAAAAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCAGCAGTTCCCCAAACATGTATATTTTACAATGTAGTGGGGAAAAT  841

seq1  CACAGCAAAATATCATAAATAATAAAAATGATCATCTAAAATGTTAAGTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCAAAATATCATAAATAATAAAAATGATCATCTAAAATGTTAAGTT  891

seq1  GGTGAGAAAACATGTTTAGATGAGGAAAGCAGAAAAAATAAAAACAGTCA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAGAAAACATGTTTAGATGAGGAAAGCAGAAAAAATAAAAACAGTCA  941

seq1  GAATAACTCTCCCCAAGGGAGTTTTTCTTGCCTTTTATTCTTCCTAGTTA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAACTCTCCCCAAGGGAGTTTTTCTTGCCTTTTATTCTTCCTAGTTA  991

seq1  TGCTTTTACATCATGTAGAGTTAGAACACAGAATTC  1035
      ||||||||||||||||||||||||||||||||||||
seq2  TGCTTTTACATCATGTAGAGTTAGAACACAGAATTC  1027