BAC Information

Click to search

BAC

Clone NameB6Ng01-136L11
Chromosome18 (Build37)
Map Location 22,565,690 - 22,566,823
singlet/doubletsinglet
Overlap geneAsxl3
Upstream geneLOC225264, Klhl14, 4921528I01Rik, LOC546708, LOC100040547
Downstream geneNol4, LOC100040579, LOC665797
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-136L11.bB6Ng01-136L11.g
ACCDH936416DH936417
length1,1241,141
definitionDH936416|Mus musculus domesticus DNA, BAC clone: B6Ng01-136L11, 5' end.DH936417|Mus musculus domesticus DNA, BAC clone: B6Ng01-136L11, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccagataaataatgcaacatgttataccgaacactgcaaaatatg
taatttttatattcagctctccagagaaaaagcacagaaaaaattgatgc
tgggaatgactgtgccagatttcaggagttttaaattagcaaaactgtca
gaaatgcagactttctgcagtgacatgacaagatgttaacatgacaagtc
acatagaatgcaatccagaaaaattacatactgccgatcttgaaaaccat
aacttaatagaattgtccagctaacattgaactccacaatagccttcctg
ctcttcatatgacattactaattactcaattccaagtatgtagatttgga
acatttaagaggaatgtagatttaaaggcaactgagaatacagtacaaat
atgacactactacagtttacattttctaaggtaaacatgattgcagatga
taaattggctgtttagtaacagcttcatgctatgcttaatatcagctaag
gacttcatctcacacagacaataagcttcaacaaacacaagtacattagt
aagttatattatttactaacttaataagctcaagatttactgtggaaaaa
aaatttaaaatatataattcacaattgtaagataatagcactctaaaggt
ttcaacaactgttttaatttccccaaatatttcccaaaagaaacaaataa
aatgttttgatttaaaattacattcccattcttggtgaattaaaatattc
ttgcaactcaagtcaatctgattagtcatccctatttaaggttctaattg
catttcaatataaaatattatctatatatcattattttgatctatatatc
actattttggtctatctcattttaaaacaataaaatgttccatctaaaga
taccaatgtttcttaaagggaagcaataaacccaatgtaatatattcaat
ggaaaatacatggttaaagtattctagcctacatctttatttatggcttt
catctaattcatatctagatacttagccttcttttcttgaaaaacatgtg
gtgtcatctcactactatgtacaaagaaataaatgaaagccttatttgta
caatttattattttatattctaaa
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggtggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaacgtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgttgacaccattgcatatactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagagtggatgctcacagtcagctaatggatggatcacagggctcccaa
tggaggagctagagaagtacccaagagctaagggatcttcaccctatagg
tggaacaacattatgactacagtaccctgagctctgactctagctgcaat
gtatcaaagatgctagtcgcatcactggaagagaagccatgaacccgact
ttgtgtgccgtacaggacgcagtcaagtgtaagtggtgcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_22565690_22566823
seq2: B6Ng01-136L11.b_43_1166 (reverse)

seq1  TTTATGAATATAAAATAATAAAATTGTACAAATAAGGCTTTCATTTATTT  50
      |||| |||||||||||||| ||||||||||||||||||||||||||||||
seq2  TTTA-GAATATAAAATAAT-AAATTGTACAAATAAGGCTTTCATTTATTT  48

seq1  CTTTTGTACAATAGTTAAGTGAGATGACA-CACATGTTTTTCAAGAAAAG  99
      | ||||||| |||||  |||||||||||| ||||||||||||||||||||
seq2  C-TTTGTAC-ATAGT--AGTGAGATGACACCACATGTTTTTCAAGAAAAG  94

seq1  AAGGCTAAGTTATCTAGAATATTGAATTAAGATGAAAAGCCATAAATAAA  149
      ||||||||| ||||||| ||| |||||| ||||| |||||||||||||||
seq2  AAGGCTAAG-TATCTAG-ATA-TGAATT-AGATG-AAAGCCATAAATAAA  139

seq1  GATGTAGGCTAGAATACTTTAACCATGTATTTTCCATTGAATATATTACA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTAGGCTAGAATACTTTAACCATGTATTTTCCATTGAATATATTACA  189

seq1  TTGGGTTTATTGCTTCCCTTTAAGAAACATTGGTATCTTTAGATGGAACA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTTTATTGCTTCCCTTTAAGAAACATTGGTATCTTTAGATGGAACA  239

seq1  TTTTATTGTTTTAAAATGAGATAGACCAAAATAGTGATATATAGATCAAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTGTTTTAAAATGAGATAGACCAAAATAGTGATATATAGATCAAA  289

seq1  ATAATGATATATAGATAATATTTTATATTGAAATGCAATTAGAACCTTAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGATATATAGATAATATTTTATATTGAAATGCAATTAGAACCTTAA  339

seq1  ATAGGGATGACTAATCAGATTGACTTGAGTTGCAAGAATATTTTAATTCA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGGATGACTAATCAGATTGACTTGAGTTGCAAGAATATTTTAATTCA  389

seq1  CCAAGAATGGGAATGTAATTTTAAATCAAAACATTTTATTTGTTTCTTTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGAATGGGAATGTAATTTTAAATCAAAACATTTTATTTGTTTCTTTT  439

seq1  GGGAAATATTTGGGGAAATTAAAACAGTTGTTGAAACCTTTAGAGTGCTA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAATATTTGGGGAAATTAAAACAGTTGTTGAAACCTTTAGAGTGCTA  489

seq1  TTATCTTACAATTGTGAATTATATATTTTAAATTTTTTTTCCACAGTAAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTTACAATTGTGAATTATATATTTTAAATTTTTTTTCCACAGTAAA  539

seq1  TCTTGAGCTTATTAAGTTAGTAAATAATATAACTTACTAATGTACTTGTG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGAGCTTATTAAGTTAGTAAATAATATAACTTACTAATGTACTTGTG  589

seq1  TTTGTTGAAGCTTATTGTCTGTGTGAGATGAAGTCCTTAGCTGATATTAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTGAAGCTTATTGTCTGTGTGAGATGAAGTCCTTAGCTGATATTAA  639

seq1  GCATAGCATGAAGCTGTTACTAAACAGCCAATTTATCATCTGCAATCATG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAGCATGAAGCTGTTACTAAACAGCCAATTTATCATCTGCAATCATG  689

seq1  TTTACCTTAGAAAATGTAAACTGTAGTAGTGTCATATTTGTACTGTATTC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCTTAGAAAATGTAAACTGTAGTAGTGTCATATTTGTACTGTATTC  739

seq1  TCAGTTGCCTTTAAATCTACATTCCTCTTAAATGTTCCAAATCTACATAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTGCCTTTAAATCTACATTCCTCTTAAATGTTCCAAATCTACATAC  789

seq1  TTGGAATTGAGTAATTAGTAATGTCATATGAAGAGCAGGAAGGCTATTGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAATTGAGTAATTAGTAATGTCATATGAAGAGCAGGAAGGCTATTGT  839

seq1  GGAGTTCAATGTTAGCTGGACAATTCTATTAAGTTATGGTTTTCAAGATC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTCAATGTTAGCTGGACAATTCTATTAAGTTATGGTTTTCAAGATC  889

seq1  GGCAGTATGTAATTTTTCTGGATTGCATTCTATGTGACTTGTCATGTTAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGTATGTAATTTTTCTGGATTGCATTCTATGTGACTTGTCATGTTAA  939

seq1  CATCTTGTCATGTCACTGCAGAAAGTCTGCATTTCTGACAGTTTTGCTAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTGTCATGTCACTGCAGAAAGTCTGCATTTCTGACAGTTTTGCTAA  989

seq1  TTTAAAACTCCTGAAATCTGGCACAGTCATTCCCAGCATCAATTTTTTCT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAACTCCTGAAATCTGGCACAGTCATTCCCAGCATCAATTTTTTCT  1039

seq1  GTGCTTTTTCTCTGGAGAGCTGAATATAAAAATTACATATTTTGCAGTGT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTTTTCTCTGGAGAGCTGAATATAAAAATTACATATTTTGCAGTGT  1089

seq1  TCGGTATAACATGTTGCATTATTTATCTGGAATTC  1134
      |||||||||||||||||||||||||||||||||||
seq2  TCGGTATAACATGTTGCATTATTTATCTGGAATTC  1124