BAC Information

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BAC

Clone NameB6Ng01-138K06
Chromosome18 (Build37)
Map Location 59,467,461 - 59,581,424
singlet/doubletdoublet
Overlap gene4833446K15Rik
Upstream geneSlc27a6, Isoc1, Adamts19, A730017C20Rik
Downstream geneLOC667549, EG240327, LOC546714, EG225594, F830016B08Rik, LOC667578, EG667584, LOC435565, Iigp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-138K06.bB6Ng01-138K06.g
ACCDH937843DH937844
length1,1411,074
definitionDH937843|Mus musculus domesticus DNA, BAC clone: B6Ng01-138K06, 5' end.DH937844|Mus musculus domesticus DNA, BAC clone: B6Ng01-138K06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(59,580,271 - 59,581,424)(59,467,461 - 59,468,547)
sequence
gaattctacttaggggaagacaagacaccacacacactaattacatataa
gatttcaccaggctcatgtccattgggctctataaagagaaagaggattg
ctaacctcagcaggaaaagaaatcaaacatagaaaagaaattttagccca
attggaagctattttgctacctaagagggtggcaattattcattgcaaag
ggcatcaaagggcaaatatttccttaaaccccagagcagtagagtagctg
acctggctgcctgggaagtggccctagattcagtagaacctctttaagtc
ttggtaaccctgcccgggcccagcttagcagactacccagaatacactcc
aggtaagagtggaagaaagaactggttaaaaagaataataaaggatgaag
gatgctatttgacagcagacccatcttatgaaattatattaaaattatat
ttgggagactacctcccatcctccccaaacatcaagcttttccccaggcg
gaatgtttaattccacctttctcaagtccttgcgtgttttgaaggaagct
cactgatttgactgtgaaagaaatcctctcatctttctgaaccctcccac
tagttccagctaggagacttggtatgggtaaagaagatccccaacctagt
ctcaggaatctgtctagaatggactctacctacttatcctcaccatcccc
atcactgtcaaagtaagtggtgtcatcctttgggaaaagggacactgagg
aagaccgcagatggacttggacctagggctcttaaagataagactgagga
gtttactaactgggatacacaatcctcaccaggtcccaaactaaacatgg
gaatttataacaaaacagagatgagaaattatcttttgggtggccctctg
ctctctgacatctcttccatgggtagagcaatattggtctagaaagagat
aagggtcagtaaatcaagttgtgaagaatactggttagacactaccttca
ggattacaatttatacatgtatgttatgatgagttgttctgtcaagacag
gtacaagcatcatatcttcaaatacctgaactagatactaggtgtgctct
tctgtgcctatttctcaatatgcacatatgagaggaagcag
gaattctttactttttacattcattcatactgttgatactcacgtagctg
ttacttaataagaatctctgtagccattactaaaaatacagagtcagaat
tttagaattatttctttggagggattttaatataatcacattatacaccc
cttcactttcctcctccaaaaccttacatatacccttcctggttctcttt
taatgtcatggcttctttgtttcaatactgttgaaattcttaatttatat
tgaaattgttcatatatatgaggaaatattcgtagtaaagaaatgcaact
tgttcaatctgaaagtcagttttctttaaaaaaaaaaaaaaacccacggt
ctcaaattccttagcatttggttctgtaaatacaataaagacacatacta
aaatacaaatagctgggaaagataaaataatgccacctcgagaaaggaaa
tgatcacatgcatggcataagatcatgtctgacacacacctcctgagatc
attgctggtcacagaatctactcatattacctgggataaattctactcct
tattccagtatcccaaattcaatgatacacaactcaaatttatctttttt
taagatattgtttggtttttatctcatcttcctgcttaagggcatcacca
ccttcttagctgtcaatgtttaacatctttgtagcacgtatgcctttcct
catcattcagaaggatactaacccatgatttgtgtggaattgtacaacat
tggctgccttcctgcagttgatcccccacctcctgcagataccctttaca
actgtaggtcttatctcagccatgtctgctcttgtcctgagatgccttca
tccacagtgatttcatgagccgtgagcagatggtttgggtgctaccttgc
ctgtgttctttctcactgtgtgccttcctcctttcctctggaaaccagca
ctcccaacacatgcaaatctctttgtgtggaatctacaattctcagcttt
acattctccgtggctctatcccatcgtatcacatatatactgagaacact
ttattccttattagctatagaatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_59580271_59581424
seq2: B6Ng01-138K06.b_43_1183 (reverse)

seq1  CTGC-TCCTCTCCATTATGTGCATATATTGAGAAATA-GCACAGAAGGAG  48
      |||| |||||||   |||||||  ||||||||||||| |||||||||   
seq2  CTGCTTCCTCTC--ATATGTGC--ATATTGAGAAATAGGCACAGAAG--A  44

seq1  GCACACCTAGTTAATCTAG-TCAGGTAATTTGAAGATATGATGCTTGTAC  97
      |||||||||||  |||||| |||||| |||||||||||||||||||||| 
seq2  GCACACCTAGT--ATCTAGTTCAGGT-ATTTGAAGATATGATGCTTGTA-  90

seq1  CCTGTCCTTGACAGAACAACTCATCATTAACAATACATGTATAAAATTGT  147
      ||||| |||||||||||||||||||| |||| |||||||||| |||||||
seq2  CCTGT-CTTGACAGAACAACTCATCA-TAAC-ATACATGTAT-AAATTGT  136

seq1  AATCCCTGAAGGTAGTTGTCTAACCAGTATTCTTCACAACTTGATTTACT  197
      ||| ||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AAT-CCTGAAGGTAG-TGTCTAACCAGTATTCTTCACAACTTGATTTACT  184

seq1  GACCCTTATCTCTTTCTAGACCAATATTGCTCTACCCATGGAAGAGATGT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCTTATCTCTTTCTAGACCAATATTGCTCTACCCATGGAAGAGATGT  234

seq1  CAGAGAGCAGAGGGCCACCCAAAAGATAATTTCTCATCTCTGTTTTGTTA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAGCAGAGGGCCACCCAAAAGATAATTTCTCATCTCTGTTTTGTTA  284

seq1  TAAATTCCCATGTTTAGTTTGGGACCTGGTGAGGATTGTGTATCCCAGTT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTCCCATGTTTAGTTTGGGACCTGGTGAGGATTGTGTATCCCAGTT  334

seq1  AGTAAACTCCTCAGTCTTATCTTTAAGAGCCCTAGGTCCAAGTCCATCTG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAACTCCTCAGTCTTATCTTTAAGAGCCCTAGGTCCAAGTCCATCTG  384

seq1  CGGTCTTCCTCAGTGTCCCTTTTCCCAAAGGATGACACCACTTACTTTGA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTCTTCCTCAGTGTCCCTTTTCCCAAAGGATGACACCACTTACTTTGA  434

seq1  CAGTGATGGGGATGGTGAGGATAAGTAGGTAGAGTCCATTCTAGACAGAT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGATGGGGATGGTGAGGATAAGTAGGTAGAGTCCATTCTAGACAGAT  484

seq1  TCCTGAGACTAGGTTGGGGATCTTCTTTACCCATACCAAGTCTCCTAGCT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGAGACTAGGTTGGGGATCTTCTTTACCCATACCAAGTCTCCTAGCT  534

seq1  GGAACTAGTGGGAGGGTTCAGAAAGATGAGAGGATTTCTTTCACAGTCAA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACTAGTGGGAGGGTTCAGAAAGATGAGAGGATTTCTTTCACAGTCAA  584

seq1  ATCAGTGAGCTTCCTTCAAAACACGCAAGGACTTGAGAAAGGTGGAATTA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTGAGCTTCCTTCAAAACACGCAAGGACTTGAGAAAGGTGGAATTA  634

seq1  AACATTCCGCCTGGGGAAAAGCTTGATGTTTGGGGAGGATGGGAGGTAGT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTCCGCCTGGGGAAAAGCTTGATGTTTGGGGAGGATGGGAGGTAGT  684

seq1  CTCCCAAATATAATTTTAATATAATTTCATAAGATGGGTCTGCTGTCAAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCAAATATAATTTTAATATAATTTCATAAGATGGGTCTGCTGTCAAA  734

seq1  TAGCATCCTTCATCCTTTATTATTCTTTTTAACCAGTTCTTTCTTCCACT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATCCTTCATCCTTTATTATTCTTTTTAACCAGTTCTTTCTTCCACT  784

seq1  CTTACCTGGAGTGTATTCTGGGTAGTCTGCTAAGCTGGGCCCGGGCAGGG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACCTGGAGTGTATTCTGGGTAGTCTGCTAAGCTGGGCCCGGGCAGGG  834

seq1  TTACCAAGACTTAAAGAGGTTCTACTGAATCTAGGGCCACTTCCCAGGCA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCAAGACTTAAAGAGGTTCTACTGAATCTAGGGCCACTTCCCAGGCA  884

seq1  GCCAGGTCAGCTACTCTACTGCTCTGGGGTTTAAGGAAATATTTGCCCTT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGTCAGCTACTCTACTGCTCTGGGGTTTAAGGAAATATTTGCCCTT  934

seq1  TGATGCCCTTTGCAATGAATAATTGCCACCCTCTTAGGTAGCAAAATAGC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGCCCTTTGCAATGAATAATTGCCACCCTCTTAGGTAGCAAAATAGC  984

seq1  TTCCAATTGGGCTAAAATTTCTTTTCTATGTTTGATTTCTTTTCCTGCTG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAATTGGGCTAAAATTTCTTTTCTATGTTTGATTTCTTTTCCTGCTG  1034

seq1  AGGTTAGCAATCCTCTTTCTCTTTATAGAGCCCAATGGACATGAGCCTGG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTAGCAATCCTCTTTCTCTTTATAGAGCCCAATGGACATGAGCCTGG  1084

seq1  TGAAATCTTATATGTAATTAGTGTGTGTGGTGTCTTGTCTTCCCCTAAGT  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATCTTATATGTAATTAGTGTGTGTGGTGTCTTGTCTTCCCCTAAGT  1134

seq1  AGAATTC  1154
      |||||||
seq2  AGAATTC  1141

seq1: chr18_59467461_59468547
seq2: B6Ng01-138K06.g_67_1140

seq1  GAATTCTTTACTTTTTACATTCATTCATACTGTTGATACTCACGTAGCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTACTTTTTACATTCATTCATACTGTTGATACTCACGTAGCTG  50

seq1  TTACTTAATAAGAATCTCTGTAGCCATTACTAAAAATACAGAGTCAGAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTAATAAGAATCTCTGTAGCCATTACTAAAAATACAGAGTCAGAAT  100

seq1  TTTAGAATTATTTCTTTGGAGGGATTTTAATATAATCACATTATACACCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAATTATTTCTTTGGAGGGATTTTAATATAATCACATTATACACCC  150

seq1  CTTCACTTTCCTCCTCCAAAACCTTACATATACCCTTCCTGGTTCTCTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACTTTCCTCCTCCAAAACCTTACATATACCCTTCCTGGTTCTCTTT  200

seq1  TAATGTCATGGCTTCTTTGTTTCAATACTGTTGAAATTCTTAATTTATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTCATGGCTTCTTTGTTTCAATACTGTTGAAATTCTTAATTTATAT  250

seq1  TGAAATTGTTCATATATATGAGGAAATATTCGTAGTAAAGAAATGCAACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATTGTTCATATATATGAGGAAATATTCGTAGTAAAGAAATGCAACT  300

seq1  TGTTCAATCTGAAAGTCAGTTTTCTTTAAAAAAAAAAAAAAACCCACGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCAATCTGAAAGTCAGTTTTCTTTAAAAAAAAAAAAAAACCCACGGT  350

seq1  CTCAAATTCCTTAGCATTTGGTTCTGTAAATACAATAAAGACACATACTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAATTCCTTAGCATTTGGTTCTGTAAATACAATAAAGACACATACTA  400

seq1  AAATACAAATAGCTGGGAAAGATAAAATAATGCCACCTCGAGAAAGGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACAAATAGCTGGGAAAGATAAAATAATGCCACCTCGAGAAAGGAAA  450

seq1  TGATCACATGCATGGCATAAGATCATGTCTGACACACACCTCCTGAGATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCACATGCATGGCATAAGATCATGTCTGACACACACCTCCTGAGATC  500

seq1  ATTGCTGGTCACAGAATCTACTCATATTACCTGGGATAAATTCTACTCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTGGTCACAGAATCTACTCATATTACCTGGGATAAATTCTACTCCT  550

seq1  TATTCCAGTATCCCAAATTCAATGATACACAACTCAAATTTATCTTTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCAGTATCCCAAATTCAATGATACACAACTCAAATTTATCTTTTTT  600

seq1  TAAGATATTGTTTGGTTTTTATCTCATCTTCCTGCTTAAGGGCATCACCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATATTGTTTGGTTTTTATCTCATCTTCCTGCTTAAGGGCATCACCA  650

seq1  CCTTCTTAGCTGTCAATGTTTAACATCTTTGTAGCACGTATGCCTTTCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTTAGCTGTCAATGTTTAACATCTTTGTAGCACGTATGCCTTTCCT  700

seq1  CATCATTCAGAAGGATACTAACCCATGATTTGTGTGGAATTGTACAACAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATTCAGAAGGATACTAACCCATGATTTGTGTGGAATTGTACAACAT  750

seq1  TGGCTGCCTTCCTGCAGTTGATCCCCCACCTCCTGCAGATACCCTTTACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGCCTTCCTGCAGTTGATCCCCCACCTCCTGCAGATACCCTTTACA  800

seq1  ACTGTAGGTCTTATCTCAGCCATGTCTGCTCTTGTCCTGAGATGCCTTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTAGGTCTTATCTCAGCCATGTCTGCTCTTGTCCTGAGATGCCTTCA  850

seq1  TCCACAGTGATTTCCATGAGCCGTGAGCAGATGGTTTGGGTGCTACCTTG  900
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TCCACAGTGATTT-CATGAGCCGTGAGCAGATGGTTTGGGTGCTACCTTG  899

seq1  CCTGTGTTCTTTCTCACTGTGTGCCTTCCTCCTTT-CTCTGGAAACCAGC  949
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CCTGTGTTCTTTCTCACTGTGTGCCTTCCTCCTTTCCTCTGGAAACCAGC  949

seq1  ACTCCCAACCACATGCAAATCTCTTTGTGTGAAATCTTACAATTCTCAGC  999
      |||||||| |||||||||||||||||||||| |||| |||||||||||||
seq2  ACTCCCAA-CACATGCAAATCTCTTTGTGTGGAATC-TACAATTCTCAGC  997

seq1  TTTTACATTCTCCGTGGCTCTATCCCATTCCGTATCACATTATAATTACT  1049
       |||||||||||||||||||||||||||  ||||||||| ||||  ||| 
seq2  -TTTACATTCTCCGTGGCTCTATCCCAT--CGTATCACA-TATA--TAC-  1040

seq1  TGAGAACAAACTTTATTCCTTATTTAGCTTATAGAATC  1087
      |||||||  ||||||||||||| ||||| |||||||||
seq2  TGAGAAC--ACTTTATTCCTTA-TTAGC-TATAGAATC  1074