BAC Information

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BAC

Clone NameB6Ng01-140K03
Chromosome18 (Build37)
Map Location 63,289,226 - 63,290,115
singlet/doubletsinglet
Overlap gene9030411M15Rik
Upstream geneAdrb2, Htr4, Fbxo38, Spink10, EG408198, 2700046A07Rik, Apcdd1, Napg, 9430028L06Rik
Downstream geneLOC627792, Txnl1, Wdr7, LOC629436
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-140K03.bB6Ng01-140K03.g
ACCDH939308DH939309
length889974
definitionDH939308|Mus musculus domesticus DNA, BAC clone: B6Ng01-140K03, 5' end.DH939309|Mus musculus domesticus DNA, BAC clone: B6Ng01-140K03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagcaatgtaaacaacattttttttttggtgaaaagaaactctat
ttatggagactgcatgccattaaaatattactgattctatgaaagtcaca
gggggaaatgattcattttctttttctaagtcgtagctcaaatagacgct
tctttgaacaatatgaaaagccatatgatgcaataacatattacaattaa
gaaggtaactgtagattgatagactagacaacttgctctatggattttta
ctaatttgatagtagatttgtgaaacatgattgtttataaaatgtatttt
gtcaaataatatactttcagcttctatttataaaatgattaattatatgg
taatatttatatatgaatacaagttaattcttgatatcgttaaggatttt
aaaaataatcaggataatccataatggccctcaaggtgagttttccagta
gagatgcttacagttaattttgagaaacactaaatcatattcccatttgc
gtgtggtccaagaatgtggttggacagctggttctagaagctttcattta
gagactctggcccaccacagcctcactgattttcagtacttgtggctgtt
tgagtgcaaatggcctccataggatcataagtttgaaaccttggtcctca
gtctgttaggaggaattagaagatgtgattgcattgcaggaggtgtgagc
ttgaggtctcagaagcctgaactatttattcccagtgctttctctgcctc
tgattgggtctcaagagctcttagctactgtccagcattgactgctcact
accacgctccccaccatgatggtcacggactcaccctctgaaattgtaag
ctgcacagaaatgatttcctctattatttggtttaccat
gaattcctgatctttccaagacttttatcatgaaggttgttagactttgt
ccaatgcttgctcagcatctaatgagatgatcatatgggtttttttttct
ttgagtttgtttatatagtggattgtgttgatggatttctgtatattgaa
ccatctttgcatccctgagataaagcctgcttgatcaggatggatgatca
ttttgatgttttcttggattcggtttgcaagaattttattgagtattttt
gcattgatatttggaagggaaattggtctgaagttctctttcttttttgg
gtctttgtgtagttaaggtaccagagtaattgtggcttcctagaaccaac
tgggtagagtaccttctgtttctattttgtggaataggttgaggagtatt
gcaattaggtcttctttgaaggtctgatagaactctgcactaaacccatc
tggtcctgggcttttttggttgggagactattaatgactgtttctatttc
tttaggggatatgggactgtttaaatcgtcaatctgatcttgatttaact
ttggtacatggtatctgtctagaaaattgtccatttcatccaggttttcc
agttttgttgtatatagtcttttgtagtaggatctgatgtttttttttgg
atttcctcagattctgttgtcatgtgtctcttttcatttctgattttgtt
aattaaggatactgtccctgtgcctctctagttagttaattctggctaag
ggtttatctatcttgttgattttctcaaagaaaacaacatcctactaact
aagaactagatataaaaaacaaataacatctcttgtttggtcgatcttgt
atagttcctttgttacgaaagaacactgggtgatttagccccgagtttga
tatttctgcctctactcctctttgtgaattcttccttcggtctgaggtat
aggggctgcaagtcgccatgttag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_63289226_63290115
seq2: B6Ng01-140K03.b_46_934

seq1  GAATTCAGCAATGTAAACAACATTTTTTTTTTGGTGAAAAGAAACTCTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCAATGTAAACAACATTTTTTTTTTGGTGAAAAGAAACTCTAT  50

seq1  TTATGGAGACTGCATGCCATTAAAATATTACTGATTCTATGAAAGTCACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGAGACTGCATGCCATTAAAATATTACTGATTCTATGAAAGTCACA  100

seq1  GGGGGAAATGATTCATTTTCTTTTTCTAAGTCGTAGCTCAAATAGACGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGAAATGATTCATTTTCTTTTTCTAAGTCGTAGCTCAAATAGACGCT  150

seq1  TCTTTGAACAATATGAAAAGCCATATGATGCAATAACATATTACAATTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGAACAATATGAAAAGCCATATGATGCAATAACATATTACAATTAA  200

seq1  GAAGGTAACTGTAGATTGATAGACTAGACAACTTGCTCTATGGATTTTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGTAACTGTAGATTGATAGACTAGACAACTTGCTCTATGGATTTTTA  250

seq1  CTAATTTGATAGTAGATTTGTGAAACATGATTGTTTATAAAATGTATTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTTGATAGTAGATTTGTGAAACATGATTGTTTATAAAATGTATTTT  300

seq1  GTCAAATAATATACTTTCAGCTTCTATTTATAAAATGATTAATTATATGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAATAATATACTTTCAGCTTCTATTTATAAAATGATTAATTATATGG  350

seq1  TAATATTTATATATGAATACAAGTTAATTCTTGATATCGTTAAGGATTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATTTATATATGAATACAAGTTAATTCTTGATATCGTTAAGGATTTT  400

seq1  AAAAATAATCAGGATAATCCATAATGGCCCTCAAGGTGAGTTTTCCAGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAATCAGGATAATCCATAATGGCCCTCAAGGTGAGTTTTCCAGTA  450

seq1  GAGATGCTTACAGTTAATTTTGAGAAACACTAAATCATATTCCCATTTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGCTTACAGTTAATTTTGAGAAACACTAAATCATATTCCCATTTGC  500

seq1  GTGTGGTCCAAGAATGTGGTTGGACAGCTGGTTCTAGAAGCTTTCATTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGTCCAAGAATGTGGTTGGACAGCTGGTTCTAGAAGCTTTCATTTA  550

seq1  GAGACTCTGGCCCACCACAGCCTCACTGATTTTCAGTACTTGTGGCTGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTCTGGCCCACCACAGCCTCACTGATTTTCAGTACTTGTGGCTGTT  600

seq1  TGAGTGCAAATGGCCTCCATAGGATCATAAGTTTGAAACCTTGGTCCTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGCAAATGGCCTCCATAGGATCATAAGTTTGAAACCTTGGTCCTCA  650

seq1  GTCTGTTAGGAGGAATTAGAAGATGTGATTGCATTGCAGGAGGTGTGAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTTAGGAGGAATTAGAAGATGTGATTGCATTGCAGGAGGTGTGAGC  700

seq1  TTGAGGTCTCAGAAGCCTGAACTATTTATTCCCAGTGCTTTCTCTGCCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGTCTCAGAAGCCTGAACTATTTATTCCCAGTGCTTTCTCTGCCTC  750

seq1  TGATTGGGTCTCAAGAGCTCTTAGCTACTGTCCAGCATTGACTGCTCACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGGGTCTCAAGAGCTCTTAGCTACTGTCCAGCATTGACTGCTCACT  800

seq1  ACCACGCTCCCCACCATGATGGTCACGGACTCACCCTCTGAAATTGTAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACGCTCCCCACCATGATGGTCACGGACTCACCCTCTGAAATTGTAAG  850

seq1  CTGCACAGAAGTGATTTCCTCTATTATTTGCTTTAGCCAT  890
      |||||||||| ||||||||||||||||||| |||| ||||
seq2  CTGCACAGAAATGATTTCCTCTATTATTTGGTTTA-CCAT  889