BAC Information

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BAC

Clone NameB6Ng01-152F01
Chromosome18 (Build37)
Map Location 84,955,278 - 85,088,697
singlet/doubletdoublet
Overlap geneCyb5
Upstream geneTshz1, Zadh2, LOC669856, Zfp407, Cndp1, EG640234, Cndp2, LOC100039711, LOC100039725, B230399E16Rik
Downstream geneFbxo15, 1700034H14Rik, LOC100039765, LOC665382, LOC545269
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152F01.bB6Ng01-152F01.g
ACCDH947919DH947920
length1,0861,145
definitionDH947919|Mus musculus domesticus DNA, BAC clone: B6Ng01-152F01, 5' end.DH947920|Mus musculus domesticus DNA, BAC clone: B6Ng01-152F01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(85,087,606 - 85,088,697)(84,955,278 - 84,956,430)
sequence
gaattctgggtacttctgaactgtactgttggaaaggaaaacagttacag
agcccattagtgggctggttgtaagggttaaatggggttatatggatgtt
tattgtgttactgtcatccctttttgcttcccaaggactgggagaaatga
atgcaagtaggattttgataaccctgctgttatctgagaactgaaggcag
gccaaggaacttggccaatctggcttatgatgcacaattcagaggcttac
aaatcaaactgggggtccctcgctgaccattctggaggtgtttggccctt
gtctgagagcccagccacagggcaccgtgctctggaaagcaggcaacaga
agcctgtctccattgctgctccatattaggaaaagcccccaaggaacatc
tccaaggccacataaatctcccagagactcaggctggagtctcaggacag
ggcttacagtatctttgttgtgttcattgatatgaaaagacccagacaaa
acactgacaactcgatgccctaggcgtgaattcctgcactgaaaaagaag
gagatagtgagcatgcatgtattcattactgcctcctgactgtggatatg
acatcacagagctcctgcccccttgattttctcactgcagtgaatggcac
ccatgagctgcaagccagatgaaactcttttcctccaaggattttatcag
ataaccagtcaaagaaaagtaaagacaaaaactacaaaagaaaaaaaaaa
aaaaaaacaactaagattgttaatctggggccaatcccaacacttagggt
acagaacagctgtagttgttccaaactgagtccatgtaaacttttctgtg
ttttattagaataggcaaatctgaaaagacaatggcagaagttacatacc
attaaaaggagtttctgtatcttggtaatatttctacatcagcctcgtaa
aagagatgagcctgtttccttaggtgctcttaaaagcgattagctttatg
acaagcagtggacagtataaaagtccattatttacagttttgtgtgtccc
aatgaggaaagaagctaccctcacacaggctattta
gaattccacacctcggttccttccttgtacattatgggggctgggtttct
gcggggggaaggccactttctgctctaacattctgctacacggtacacag
cagcttggagagatgctgagaagtcatctggcatatctataggcttccag
ggaaattacggcttaatcaaaaccagcaaaagagtttaatttagaaatcc
tcatttcttatcccctgattcccatcactttccctgaagaaattacacag
ccttgttagagaaccaactcggcatgtctcagactttcccctctggactc
aagcagcttacctccactctgaggcctctttttgagcaatgcaacataag
aatgaggcaacatgttgaggactttcgggttcccagcataggtggccatt
gtgccttgcttcccaggcaggacaggtaggggtggtaagcatgcatgtgt
gcctgtgtagagcaaagtgcaggaaggaatggcggttaatgttttcctta
gccacccaaattcattgagctgttacaacagatgggctatccagtgatct
ctgaaaggagaccgtgcctgtgttatgttgaaggtcctgtcatgcaggga
aagtaaaagccatatgttctgatgaaaatattttctgataatgtggaaca
aacattctgtttctcatcaccatctctcagcacagagtgcacttgaaatc
aggttaacgagagctaaatttaatcattgtgtgacctgattgggtatcca
cagcctgggttatcaaatatcccactttctgttgctctcagttccatctc
gctgtttccttagggaatgcaaaacaatggcggcagaaaaataatgaaat
gtggtaaatctggtcagagagaagtatgactaaaattccttctttgtttc
atcccttcagccccatgtgtagtgtggttactttgggttacaaagtactg
aagtcagtttctatgaaggaaagacaagattatggctctactttataaca
tattcctttgtttatagatgcctaataaaaaaggtcataacaattaatgg
gccatttgtacagttttctgggctttttctgaaatatgcatgacagcaag
tcattggtccacgcattaacgaggtctctatagcatctaaccttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_85087606_85088697
seq2: B6Ng01-152F01.b_44_1129 (reverse)

seq1  TAAATACCCCTGTGTGA-GGTAGCATCTTTCCTCATTGGGACACACAAAA  49
      ||||||  ||||||||| |||||| |||||||||||||||||||||||||
seq2  TAAATA-GCCTGTGTGAGGGTAGCTTCTTTCCTCATTGGGACACACAAAA  49

seq1  CCTGTAAATACATGGACTTTTTATACCTGTCAACTGCTTGTCATTAAAGC  99
       ||||||||| |||||| ||||||| ||||| ||||||||||| ||||||
seq2  -CTGTAAATA-ATGGAC-TTTTATA-CTGTCCACTGCTTGTCA-TAAAGC  94

seq1  TAATCGCTTTCTGAGAGCACCTAAGGAAACAGGCTCATCTCTTTTACGAG  149
      |||||||||| | |||||||||||||||||||||||||||||||||||||
seq2  TAATCGCTTT-TAAGAGCACCTAAGGAAACAGGCTCATCTCTTTTACGAG  143

seq1  GCTGATGTAGAAATATTACCAAGATACAGAAACTCCTTTTAATGGTATGT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGATGTAGAAATATTACCAAGATACAGAAACTCCTTTTAATGGTATGT  193

seq1  AACTTCTGCCATTGTCTTTTCAGATTTGCCTATTCTAATTAGAACACAGA  249
      |||||||||||||||||||||||||||||||||||||| || ||||||||
seq2  AACTTCTGCCATTGTCTTTTCAGATTTGCCTATTCTAA-TAAAACACAGA  242

seq1  AAAGTTTACATGGACTCAGTTTGGAACAACTACAGCTGTTCTGTACCCTA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTTACATGGACTCAGTTTGGAACAACTACAGCTGTTCTGTACCCTA  292

seq1  AGTGTTGGGATTGGCCCCAGATTAACAATCTTAGTTG-TTTTTTTTTTTT  348
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AGTGTTGGGATTGGCCCCAGATTAACAATCTTAGTTGTTTTTTTTTTTTT  342

seq1  TTTTCTTTTGTAGTTTTTGTCTTTACTTTTCTTTGACTGGTTATCTGATA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTTGTAGTTTTTGTCTTTACTTTTCTTTGACTGGTTATCTGATA  392

seq1  AAATCCTTGGAGGAAAAGAGTTTCATCTGGCTTGCAGCTCATGGGTGCCA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCTTGGAGGAAAAGAGTTTCATCTGGCTTGCAGCTCATGGGTGCCA  442

seq1  TTCACTGCAGTGAGAAAATCAAGGGGGCAGGAGCTCTGTGATGTCATATC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTGCAGTGAGAAAATCAAGGGGGCAGGAGCTCTGTGATGTCATATC  492

seq1  CACAGTCAGGAGGCAGTAATGAATACATGCATGCTCACTATCTCCTTCTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTCAGGAGGCAGTAATGAATACATGCATGCTCACTATCTCCTTCTT  542

seq1  TTTCAGTGCAGGAATTCACGCCTAGGGCATCGAGTTGTCAGTGTTTTGTC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGTGCAGGAATTCACGCCTAGGGCATCGAGTTGTCAGTGTTTTGTC  592

seq1  TGGGTCTTTTCATATCAATGAACACAACAAAGATACTGTAAGCCCTGTCC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTCTTTTCATATCAATGAACACAACAAAGATACTGTAAGCCCTGTCC  642

seq1  TGAGACTCCAGCCTGAGTCTCTGGGAGATTTATGTGGCCTTGGAGATGTT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACTCCAGCCTGAGTCTCTGGGAGATTTATGTGGCCTTGGAGATGTT  692

seq1  CCTTGGGGGCTTTTCCTAATATGGAGCAGCAATGGAGACAGGCTTCTGTT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGGGGCTTTTCCTAATATGGAGCAGCAATGGAGACAGGCTTCTGTT  742

seq1  GCCTGCTTTCCAGAGCACGGTGCCCTGTGGCTGGGCTCTCAGACAAGGGC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCTTTCCAGAGCACGGTGCCCTGTGGCTGGGCTCTCAGACAAGGGC  792

seq1  CAAACACCTCCAGAATGGTCAGCGAGGGACCCCCAGTTTGATTTGTAAGC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACACCTCCAGAATGGTCAGCGAGGGACCCCCAGTTTGATTTGTAAGC  842

seq1  CTCTGAATTGTGCATCATAAGCCAGATTGGCCAAGTTCCTTGGCCTGCCT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAATTGTGCATCATAAGCCAGATTGGCCAAGTTCCTTGGCCTGCCT  892

seq1  TCAGTTCTCAGATAACAGCAGGGTTATCAAAATCCTACTTGCATTCATTT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTCTCAGATAACAGCAGGGTTATCAAAATCCTACTTGCATTCATTT  942

seq1  CTCCCAGTCCTTGGGAAGCAAAAAGGGATGACAGTAACACAATAAACATC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCAGTCCTTGGGAAGCAAAAAGGGATGACAGTAACACAATAAACATC  992

seq1  CATATAACCCCATTTAACCCTTACAACCAGCCCACTAATGGGCTCTGTAA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATAACCCCATTTAACCCTTACAACCAGCCCACTAATGGGCTCTGTAA  1042

seq1  CTGTTTTCCTTTCCAACAGTACAGTTCAGAAGTACCCAGAATTC  1092
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTTCCTTTCCAACAGTACAGTTCAGAAGTACCCAGAATTC  1086

seq1: chr18_84955278_84956430
seq2: B6Ng01-152F01.g_67_1211

seq1  GAATTCCACACCTCGGTTCCTTCCTTGTACATTATGGGGGCTGGGTTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACACCTCGGTTCCTTCCTTGTACATTATGGGGGCTGGGTTTCT  50

seq1  GCGGGGGGAAGGCCACTTTCTGCTCTAACATTCTGCTACACGGTACACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGGGGGAAGGCCACTTTCTGCTCTAACATTCTGCTACACGGTACACAG  100

seq1  CAGCTTGGAGAGATGCTGAGAAGTCATCTGGCATATCTATAGGCTTCCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTGGAGAGATGCTGAGAAGTCATCTGGCATATCTATAGGCTTCCAG  150

seq1  GGAAATTACGGCTTAATCAAAACCAGCAAAAGAGTTTAATTTAGAAATCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATTACGGCTTAATCAAAACCAGCAAAAGAGTTTAATTTAGAAATCC  200

seq1  TCATTTCTTATCCCCTGATTCCCATCACTTTCCCTGAAGAAATTACACAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTCTTATCCCCTGATTCCCATCACTTTCCCTGAAGAAATTACACAG  250

seq1  CCTTGTTAGAGAACCAACTCGGCATGTCTCAGACTTTCCCCTCTGGACTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTTAGAGAACCAACTCGGCATGTCTCAGACTTTCCCCTCTGGACTC  300

seq1  AAGCAGCTTACCTCCACTCTGAGGCCTCTTTTTGAGCAATGCAACATAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGCTTACCTCCACTCTGAGGCCTCTTTTTGAGCAATGCAACATAAG  350

seq1  AATGAGGCAACATGTTGAGGACTTTCGGGTTCCCAGCATAGGTGGCCATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGGCAACATGTTGAGGACTTTCGGGTTCCCAGCATAGGTGGCCATT  400

seq1  GTGCCTTGCTTCCCAGGCAGGACAGGTAGGGGTGGTAAGCATGCATGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTTGCTTCCCAGGCAGGACAGGTAGGGGTGGTAAGCATGCATGTGT  450

seq1  GCCTGTGTAGAGCAAAGTGCAGGAAGGAATGGCGGTTAATGTTTTCCTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGTGTAGAGCAAAGTGCAGGAAGGAATGGCGGTTAATGTTTTCCTTA  500

seq1  GCCACCCAAATTCATTGAGCTGTTACAACAGATGGGCTATCCAGTGATCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACCCAAATTCATTGAGCTGTTACAACAGATGGGCTATCCAGTGATCT  550

seq1  CTGAAAGGAGACCGTGCCTGTGTTATGTTGAAGGTCCTGTCATGCAGGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAGGAGACCGTGCCTGTGTTATGTTGAAGGTCCTGTCATGCAGGGA  600

seq1  AAGTAAAAGCCATATGTTCTGATGAAAATATTTTCTGATAATGTGGAACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAAAGCCATATGTTCTGATGAAAATATTTTCTGATAATGTGGAACA  650

seq1  AACATTCTGTTTCTCATCACCATCTCTCAGCACAGAGTGCACTTGAAATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTCTGTTTCTCATCACCATCTCTCAGCACAGAGTGCACTTGAAATC  700

seq1  AGGTTAACGAGAGCTAAATTTAATCATTGTGTGACCTGATTGGGTATCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTAACGAGAGCTAAATTTAATCATTGTGTGACCTGATTGGGTATCCA  750

seq1  CAGCCTGGGTTATCAAATATCCCACTTTCTGTTGCTCTCAGTTCCATCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTGGGTTATCAAATATCCCACTTTCTGTTGCTCTCAGTTCCATCTC  800

seq1  GCTGTTTCCTTAGGGAATGCAAAACAATGGCGGCAGAAAAATAATGAAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTTCCTTAGGGAATGCAAAACAATGGCGGCAGAAAAATAATGAAAT  850

seq1  GTGGTAAATCTGGTCAGAGAGAAGTATGACTAAAATTCCTTCCTTTGTTT  900
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GTGGTAAATCTGGTCAGAGAGAAGTATGACTAAAATTCCTT-CTTTGTTT  899

seq1  CATCCCTTCAGCCCCATGTGTAGTGTGGGTTACTTTGGTTTACAAAGTAC  950
      |||||||||||||||||||||||||| ||||||||||| |||||||||||
seq2  CATCCCTTCAGCCCCATGTGTAGTGT-GGTTACTTTGGGTTACAAAGTAC  948

seq1  TGAAGCCAG-TTCTTAGAAGGAAAGACACAGATTATTGGCTCTACTTTAT  999
      ||||| ||| ||||  |||||||||||| |||||| ||||||||||||||
seq2  TGAAGTCAGTTTCTATGAAGGAAAGACA-AGATTA-TGGCTCTACTTTAT  996

seq1  CACATATTCCTTTGTTTTTATAGATGCCTTATAAAAACAGGTCATAACAA  1049
       |||||||||||||  ||||||||||||| ||||||| ||||||||||||
seq2  AACATATTCCTTTG--TTTATAGATGCCTAATAAAAA-AGGTCATAACAA  1043

seq1  TTAAT-GGCCATTTGTACAGGTTTTCTGGGC-TTTCCTGGAAT-TGCATG  1096
      ||||| ||||||||||||| ||||||||||| ||| ||| ||| ||||||
seq2  TTAATGGGCCATTTGTACA-GTTTTCTGGGCTTTTTCTGAAATATGCATG  1092

seq1  AGCAAGCATGTCATTGGTTCCCAGCATAAACAGAGGGCTCTTATGCATCT  1146
      |   |||| |||||||| |||  |||| ||| |||| ||||   ||||||
seq2  A--CAGCAAGTCATTGG-TCCACGCATTAAC-GAGGTCTCTATAGCATCT  1138

seq1  AACCTTT  1153
      |||||||
seq2  AACCTTT  1145