BAC Information

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BAC

Clone NameB6Ng01-153K09
Chromosome18 (Build37)2 (Build37)
Map Location 32,355,760 - 32,356,515100,609,804 - 100,610,370
singlet/doubletsingletsinglet
Overlap geneMap3k2
Upstream geneRit2, EG666130, Syt4, LOC383420, Slc25a46, Sap130, LOC640549, Ammecr1l, Polr2d, EG626327, Wdr33, Sft2d3, Lims2, Gpr17, Myo7b, Iws1, Proc, LOC546710
Downstream geneErcc3, Bin1, Gypc, LOC100041160, LOC100041170, Tslp, Wdr36, Camk4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-153K09.bB6Ng01-153K09.g
ACCDH948902DH948903
length759657
definitionDH948902|Mus musculus domesticus DNA, BAC clone: B6Ng01-153K09, 5' end.DH948903|Mus musculus domesticus DNA, BAC clone: B6Ng01-153K09, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(32,355,760 - 32,356,515)(100,609,804 - 100,610,370)
sequence
gaattcaaagcttgctgatcatctgggtatttttttaaaaagacataaat
acatacacatttttaaaagaactctaatgtcaacatatattcatcatagt
cattaagcagaatttataatggaatttagtaaataaatgaattagttaga
ctggagagatggctcagcagctaatggtacctgctgctctttcggaagat
tcaagtttggttcctagcactctcatgcagcaacttacaaccatctatga
ctccaatcccagggactcctgtaccctccttagcttccccgggtacccac
acacatgtgacacacattcatagatgaaatacatcttttgctgtatggtc
ctggaattatgtacatcaggctggctttgaactcttagagatccacctgc
ctctttttatcaaacaaaatgttaattgtgttacaagaatcacacacaca
tacacacacacacacatacacacacctctgaaaataacatcaaactactt
aagactcaagctctgcatctacaaatggggcatttttgttttaaatagtt
tttattttacttaatttctatattatttttaactgtgtgtatatatgtat
gcatgtgtgtgtgtgtattcatatatatatatatatatatatatatgaga
gtacaggtgcccgtgggaggccagaagtttcatatgccctagagctggaa
tgtgactgatgtcatctaatgtagggtgctgggaatagaaactgaggtcc
ctctgaaag
gaattcctgaactttccaaaacttttatcatgaatgggtgttggatcttg
tctaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgatttct
ttaatgtgttcttggattcggttagcgagaattttattaaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctatcttgtgaaatagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggctgggagactattaataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtcccatttcgtccaggttttcc
agttttgttgagtataatcttttgtagaaggatctgatggtgtttttgga
ttcttca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_32355760_32356515
seq2: B6Ng01-153K09.b_47_805 (reverse)

seq1  CTTTCAGA-GGACCTCAG-TTCTATTCCCAGCA-CCTACATTAGATGACT  47
      |||||||| ||||||||| |||||||||||||| ||||||||||||||| 
seq2  CTTTCAGAGGGACCTCAGTTTCTATTCCCAGCACCCTACATTAGATGAC-  49

seq1  ATCAGTCACCTTCCAGCTCTAGGGCATCTGACACCTCTGGCCT-CCACGG  96
      ||||||||| ||||||||||||||||| ||| || |||||||| ||||||
seq2  ATCAGTCACATTCCAGCTCTAGGGCATATGAAACTTCTGGCCTCCCACGG  99

seq1  GCACCTGTACTCTCATATATATATATATATATATATATATGAATACACAC  146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCTGTACTCTCATATATATATATATATATATATATATGAATACACAC  149

seq1  ACACACATGCATACATATATACACACAGTTAAAAATAATATAGAAATTAA  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACATGCATACATATATACACACAGTTAAAAATAATATAGAAATTAA  199

seq1  GTAAAATAAAAACTATTTAAAACAAAAATGCCCCATTTGTAGATGCAGAG  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAATAAAAACTATTTAAAACAAAAATGCCCCATTTGTAGATGCAGAG  249

seq1  CTTGAGTCTTAAGTAGTTTGATGTTATTTTCAGAGGTGTGTGTATGTGTG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGTCTTAAGTAGTTTGATGTTATTTTCAGAGGTGTGTGTATGTGTG  299

seq1  TGTGTGTGTATGTGTGTGTGATTCTTGTAACACAATTAACATTTTGTTTG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTATGTGTGTGTGATTCTTGTAACACAATTAACATTTTGTTTG  349

seq1  ATAAAAAGAGGCAGGTGGATCTCTAAGAGTTCAAAGCCAGCCTGATGTAC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAAGAGGCAGGTGGATCTCTAAGAGTTCAAAGCCAGCCTGATGTAC  399

seq1  ATAATTCCAGGACCATACAGCAAAAGATGTATTTCATCTATGAATGTGTG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTCCAGGACCATACAGCAAAAGATGTATTTCATCTATGAATGTGTG  449

seq1  TCACATGTGTGTGGGTACCCGGGGAAGCTAAGGAGGGTACAGGAGTCCCT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATGTGTGTGGGTACCCGGGGAAGCTAAGGAGGGTACAGGAGTCCCT  499

seq1  GGGATTGGAGTCATAGATGGTTGTAAGTTGCTGCATGAGAGTGCTAGGAA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATTGGAGTCATAGATGGTTGTAAGTTGCTGCATGAGAGTGCTAGGAA  549

seq1  CCAAACTTGAATCTTCCGAAAGAGCAGCAGGTACCATTAGCTGCTGAGCC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACTTGAATCTTCCGAAAGAGCAGCAGGTACCATTAGCTGCTGAGCC  599

seq1  ATCTCTCCAGTCTAACTAATTCATTTATTTACTAAATTCCATTATAAATT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTCCAGTCTAACTAATTCATTTATTTACTAAATTCCATTATAAATT  649

seq1  CTGCTTAATGACTATGATGAATATATGTTGACATTAGAGTTCTTTTAAAA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTAATGACTATGATGAATATATGTTGACATTAGAGTTCTTTTAAAA  699

seq1  ATGTGTATGTATTTATGTCTTTTTAAAAAAATACCCAGATGATCAGCAAG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTATGTATTTATGTCTTTTTAAAAAAATACCCAGATGATCAGCAAG  749

seq1  CTTTGAATTC  756
      ||||||||||
seq2  CTTTGAATTC  759

seq1: chr2_100609804_100610370
seq2: B6Ng01-153K09.g_159_726 (reverse)

seq1  TGAAGAAATCCAAAACACCATCAGATCCTTCTACAAAAGCTTATACTCAA  50
      |||||||  | |||||||||||||||||||||||||||| ||||||||||
seq2  TGAAGAATCCAAAAACACCATCAGATCCTTCTACAAAAGATTATACTCAA  50

seq1  CAAAACTGGAAAACCTGGATGAAAT-GGACAAATTTCTGGACAGATACCA  99
      ||||||||||||||||||| ||||| ||||||||||||||||||||||||
seq2  CAAAACTGGAAAACCTGGACGAAATGGGACAAATTTCTGGACAGATACCA  100

seq1  GGTACCAAAGTTGAATCAGGATCAAGTTGACCTTCTAAACAGTCCCATAT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACCAAAGTTGAATCAGGATCAAGTTGACCTTCTAAACAGTCCCATAT  150

seq1  CCCCTAAAGAAATAGAAGCAGTTATTAATAGTCTCCCAACCAAAAAAAGC  199
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CCCCTAAAGAAATAGAAGCAGTTATTAATAGTCTCCCAGCCAAAAAAAGC  200

seq1  CCAGGACCAGATGGGTTTAGTGCAGAGTTCTATCAGACCTTCAAAGAAGA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGACCAGATGGGTTTAGTGCAGAGTTCTATCAGACCTTCAAAGAAGA  250

seq1  TCTAATTCCAGTTCTGCACAAACTATTTCACAAGATAGAAGTAGAAGGTA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATTCCAGTTCTGCACAAACTATTTCACAAGATAGAAGTAGAAGGTA  300

seq1  CTCTACCCAACTCATTTTATGAAGCCACTATTACTCTGATACCTAAACCA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTACCCAACTCATTTTATGAAGCCACTATTACTCTGATACCTAAACCA  350

seq1  CAGAAAGATCCAACAAAGATAGAGAACTTCAGACCAATTTCTCTTATGAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAGATCCAACAAAGATAGAGAACTTCAGACCAATTTCTCTTATGAA  400

seq1  TATCGATGCAAAAATCCTTAATAAAATTCTCGCTAACCGAATCCAAGAAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCGATGCAAAAATCCTTAATAAAATTCTCGCTAACCGAATCCAAGAAC  450

seq1  ACATTAAAGAAATCATCCATCCTGACCAAGTAGGTTTTATTCCAGGGATG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTAAAGAAATCATCCATCCTGACCAAGTAGGTTTTATTCCAGGGATG  500

seq1  CAGGGATGGTTTAATATACGAAAATCCATCAATGTAATCCATTATATAAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGATGGTTTAATATACGAAAATCCATCAATGTAATCCATTATATAAA  550

seq1  CAAACTCAAAGACAAAAA  567
      ||||||||||||||||||
seq2  CAAACTCAAAGACAAAAA  568