BAC Information

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BAC

Clone NameB6Ng01-156J20
Chromosome18 (Build37)
Map Location 73,822,180 - 73,937,372
singlet/doubletdoublet
Overlap geneSmad4, Elac1, Me2
Upstream geneLOC100043411, LOC100042955, Rkhd2
Downstream geneMro, Mapk4, 2810433K01Rik, Cxxc1, EG435570, Mbd1, Ccdc11, LOC628298, LOC668124, LOC668126, Myo5b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-156J20.bB6Ng01-156J20.g
ACCDH951071DH951072
length1,018543
definitionDH951071|Mus musculus domesticus DNA, BAC clone: B6Ng01-156J20, 5' end.DH951072|Mus musculus domesticus DNA, BAC clone: B6Ng01-156J20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(73,822,180 - 73,823,199)(73,936,824 - 73,937,372)
sequence
gaattcacctaaggcatggatcaggctccataccatacccagcaccagaa
agaccacaaaagctccaagtggctacacataaatacttgatggtgaggaa
aactttcgactcgatctgactgcaacactcacttgtggaagccacaggaa
tgttggggaagttggtggtgctggtggcgttagactctgccggggctaac
agagccggggcgctgtacgtctccgttgatgcgcgattacttggcgggtg
ttggatggtttgaatcgaatgtccttcagtgggtaaggacggctgtcctt
caaagtcgtgaacgtactcatccttcactaacatacttggagctacgcat
aaaacacaaacaaaaaagattttcacagtcttccatttccacagaaaggc
tacatacaagtaatatgacagtacctaaaacttaaccacagtataaataa
ctcaaattcagaatgtttttcatataacagacatgcattttatcagctct
agctactttagagattttattaatttgactcactaaactttgaagacata
ttcttcagtattctagcgaattcagaagtacacaatcgcttactcaactg
tgaaagccacttactccaggcaaagtgcgcgaatgaatacttagttctac
ctttctgcactttcacgctgtgatgaagtgggattggaaaggtattcaga
ccaggaccaaggatgacaattaacatatcatttggagttgctgtacactg
agagtcccttttaaaaagtcagcctgaagctaaatgtagggtgactgccg
acaatgtggcatccagaaggcaggctaaaaagatcacaaatcaacaagct
tgaatttccttttcaaaatcccaatctacacaaaaataatgagaacacca
ataattaaatctttcacagtttagtgagcaatctagggtcttgaatcatg
aagaacagttatcttagtcaactagggattgatctgctttgctggggttt
tgtgtgttttttggtttt
agagagctctctgcctgcatacttgagtgaaatgaaaggacagggagtgt
tgttcctcaggccagtgggaaacagtcccagaagctcgggtgtaaaggaa
gggtgggcaaacatgtcttgtaaacatgcagggaagacagagcaagggtt
tatagactccaaacagtcacactgggacacagatgcacagcattgctcct
tcagttaaacagacccaacgtgttatgagggatccacactagcaggaagg
tacattttaagctaatggaaaaaaaaaattttttttttgatgaggataca
caatgtaaacttgaggataatactagaataccaccacaacaactcatttc
cagtcagggaatatttggggagaaagtgaaacaattgaaaaacaaaagaa
aaaaaaggaactgtacgccaggcaagacagctgtcagtcaaaacaccagg
cttaagtgtcttcactcacgacacagcccactaacagagaaggagaggag
aagctgtaagaggaaagagaccccggggaaggggggtggggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_73822180_73823199
seq2: B6Ng01-156J20.b_44_1061

seq1  GAATTCACCTAAGGCATGGATCAGGCTCCATACCATACCCAGCACCAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCTAAGGCATGGATCAGGCTCCATACCATACCCAGCACCAGAA  50

seq1  AGACCACAAAAGCTCCAAGTGGCTACACATAAATACTTGATGGTGAGGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCACAAAAGCTCCAAGTGGCTACACATAAATACTTGATGGTGAGGAA  100

seq1  AACTTTCGACTCGATCTGACTGCAACACTCACTTGTGGAAGCCACAGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTCGACTCGATCTGACTGCAACACTCACTTGTGGAAGCCACAGGAA  150

seq1  TGTTGGGGAAGTTGGTGGTGCTGGTGGCGTTAGACTCTGCCGGGGCTAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGGGAAGTTGGTGGTGCTGGTGGCGTTAGACTCTGCCGGGGCTAAC  200

seq1  AGAGCCGGGGCGCTGTACGTCTCCGTTGATGCGCGATTACTTGGCGGGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCGGGGCGCTGTACGTCTCCGTTGATGCGCGATTACTTGGCGGGTG  250

seq1  TTGGATGGTTTGAATCGAATGTCCTTCAGTGGGTAAGGACGGCTGTCCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATGGTTTGAATCGAATGTCCTTCAGTGGGTAAGGACGGCTGTCCTT  300

seq1  CAAAGTCGTGAACGTACTCATCCTTCACTAACATACTTGGAGCTACGCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTCGTGAACGTACTCATCCTTCACTAACATACTTGGAGCTACGCAT  350

seq1  AAAACACAAACAAAAAAGATTTTCACAGTCTTCCATTTCCACAGAAAGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACACAAACAAAAAAGATTTTCACAGTCTTCCATTTCCACAGAAAGGC  400

seq1  TACATACAAGTAATATGACAGTACCTAAAACTTAACCACAGTATAAATAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATACAAGTAATATGACAGTACCTAAAACTTAACCACAGTATAAATAA  450

seq1  CTCAAATTCAGAATGTTTTTCATATAACAGACATGCATTTTATCAGCTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAATTCAGAATGTTTTTCATATAACAGACATGCATTTTATCAGCTCT  500

seq1  AGCTACTTTAGAGATTTTATTAATTTGACTCACTAAACTTTGAAGACATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTACTTTAGAGATTTTATTAATTTGACTCACTAAACTTTGAAGACATA  550

seq1  TTCTTCAGTATTCTAGCGAATTCAGAAGTACACAATCGCTTACTCAACTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCAGTATTCTAGCGAATTCAGAAGTACACAATCGCTTACTCAACTG  600

seq1  TGAAAGCCACTTACTCCAGGCAAAGTGCGCGAATGAATACTTAGTTCTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGCCACTTACTCCAGGCAAAGTGCGCGAATGAATACTTAGTTCTAC  650

seq1  CTTTCTGCAC-TTCACGCTGTGATGAAGTGGGATTGGAAAGGTATTCAGA  699
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTGCACTTTCACGCTGTGATGAAGTGGGATTGGAAAGGTATTCAGA  700

seq1  CCAGGACCAAGGATGACAATTAACATATCATTTGGAGTTGCTGTACACTG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGACCAAGGATGACAATTAACATATCATTTGGAGTTGCTGTACACTG  750

seq1  AGAGTCCC-TTTAAAAAGTCAGCCTGAAGCTAAATGTAGGGTGACTGCCG  798
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCCCTTTTAAAAAGTCAGCCTGAAGCTAAATGTAGGGTGACTGCCG  800

seq1  ACAATGTGGCATCCAGAAGGCAGGCTAAAAAGATCACAAATCAACAAGCT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGTGGCATCCAGAAGGCAGGCTAAAAAGATCACAAATCAACAAGCT  850

seq1  TGAATTTCCTTTTCAAAATCCCAATCTACACAAAAATAATGAGAACACCA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTTCCTTTTCAAAATCCCAATCTACACAAAAATAATGAGAACACCA  900

seq1  ATAATTAAATCTTTCACAGTTTAGTGAGCAAATCTAGGGTC-TGAATCAT  947
      ||||||||||||||||||||||||||||| ||||||||||| ||||||||
seq2  ATAATTAAATCTTTCACAGTTTAGTGAGC-AATCTAGGGTCTTGAATCAT  949

seq1  GAAGAACAGTTATCTTTAGTCAACTAGGGATTGATCTGCTTTGCTGGGGT  997
      |||||||||||||| |||||||||||||||||||||||||||||||||| 
seq2  GAAGAACAGTTATC-TTAGTCAACTAGGGATTGATCTGCTTTGCTGGGG-  997

seq1  TTTTGTTGTTGTTTTTTGGTTTT  1020
      ||||||   ||||||||||||||
seq2  TTTTGT--GTGTTTTTTGGTTTT  1018

seq1: chr18_73936824_73937372
seq2: B6Ng01-156J20.g_68_616 (reverse)

seq1  CACCCCACCCCCCTTCCCCGGGGTCTCTTTCCTCTTACAGCTTCTCCTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCACCCCCCTTCCCCGGGGTCTCTTTCCTCTTACAGCTTCTCCTCT  50

seq1  CCTTCTCTGTTAGTGGGCTGTGTCGTGAGTGAAGACACTTAAGCCTGGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTCTGTTAGTGGGCTGTGTCGTGAGTGAAGACACTTAAGCCTGGTG  100

seq1  TTTTGACTGACAGCTGTCTTGCCTGGCGTACAGTTCCTTTTTTTTCTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGACTGACAGCTGTCTTGCCTGGCGTACAGTTCCTTTTTTTTCTTTT  150

seq1  GTTTTTCAATTGTTTCACTTTCTCCCCAAATATTCCCTGACTGGAAATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTCAATTGTTTCACTTTCTCCCCAAATATTCCCTGACTGGAAATGA  200

seq1  GTTGTTGTGGTGGTATTCTAGTATTATCCTCAAGTTTACATTGTGTATCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTGTGGTGGTATTCTAGTATTATCCTCAAGTTTACATTGTGTATCC  250

seq1  TCATCAAAAAAAAAATTTTTTTTTTCCATTAGCTTAAAATGTACCTTCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCAAAAAAAAAATTTTTTTTTTCCATTAGCTTAAAATGTACCTTCCT  300

seq1  GCTAGTGTGGATCCCTCATAACACGTTGGGTCTGTTTAACTGAAGGAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGTGTGGATCCCTCATAACACGTTGGGTCTGTTTAACTGAAGGAGCA  350

seq1  ATGCTGTGCATCTGTGTCCCAGTGTGACTGTTTGGAGTCTATAAACCCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGTGCATCTGTGTCCCAGTGTGACTGTTTGGAGTCTATAAACCCTT  400

seq1  GCTCTGTCTTCCCTGCATGTTTACAAGACATGTTTGCCCACCCTTCCTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGTCTTCCCTGCATGTTTACAAGACATGTTTGCCCACCCTTCCTTT  450

seq1  ACACCCGAGCTTCTGGGACTGTTTCCCACTGGCCTGAGGAACAACACTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCCGAGCTTCTGGGACTGTTTCCCACTGGCCTGAGGAACAACACTCC  500

seq1  CTGTCCTTTCATTTCACTCAAGTATGCAGGCAGAGAGCTCTCTGAATTC  549
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCTTTCATTTCACTCAAGTATGCAGGCAGAGAGCTCTCTGAATTC  549