BAC Information

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BAC

Clone NameB6Ng01-159P22
Chromosome18 (Build37)
Map Location 66,968,399 - 67,092,822
singlet/doubletdoublet
Overlap geneMc4r
Upstream geneSec11c, Grp, Rax, Cplx4, Lman1, Ccbe1, Pmaip1, LOC100042852
Downstream geneGnal, Chmp1b, Mppe1, Impa2, B430212C06Rik, Cidea, Tubb6, Afg3l2, Slmo1, Spire1, Cep76, Tnfsf5ip1, Ptpn2, Seh1l, LOC667939
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-159P22.bB6Ng01-159P22.g
ACCDH953496DH953497
length1,1891,034
definitionDH953496|Mus musculus domesticus DNA, BAC clone: B6Ng01-159P22, 5' end.DH953497|Mus musculus domesticus DNA, BAC clone: B6Ng01-159P22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,091,622 - 67,092,822)(66,968,399 - 66,969,430)
sequence
gaattccaagggcagtacgttagagagctaaaagtaataattataaggca
gtttaacaagatgaaagagggtaaaacaaacttctgaatgaattcaagga
gaatacaaaccaccttctgatctaaggaaggcagtgtaggacaagaagga
agaaccagatagacatattgaaaccagatagacatattgaaaccagatag
acatattgaaccagatagacatactgaaagaaatccgattgaacttttag
aaatgaatagacctctaagtcaaattataaattcttttgagccctgatac
ccagaaaattttatattgttacagaaactcagatataacctctatctaag
aaactccaacacagacaattgaaatgagaatagtaatgaatttttagaaa
acacactgggatctttatgaaatgtccagagtcaaagtactataaaaaga
taatttgtcattcaccttacttataaaagcaaacacaaattcttcaaact
gaaaacagaaaatgggataagaatgacgaaagaaaggtttactactttaa
aataaatgagggccagaacgatagctcagcccatgagagtgctagccacc
aagcttgatgacctgagttcaatccctgggactcacatagttcaagaaga
gaaccaattaccacaggttgtcccctaacctccacgttggcaccatgata
cacgcatgtgtgatttaaataatgtgatattaaatattggctcactgcaa
agagtggacataaaggaaacggccagaattataacattattactttccaa
gtaagaaagaaacttcaaggactgtctaaattaaaatttgtcttctaaaa
cagaaaagaagtagttggagagctagataaactgaaagggcttttctggc
atgagcaagctggaaagacactacagaacatgaaagcaagtatcgcatta
atggtgaaatgctgcatgtatcattttcagcgtaaggagaaatgcaggac
ttctaggtttctacattcagtgatggactagcatctgaagattggaaaat
attaacatgctataaagacctaaagagaaataagaggtttataaggccat
gagggatccttaaggactatacttataaatttatgagacaacccagccat
tgaaatttttgatatggcagtactgaaatctaacctaga
gaattcactactttcagccaggttgatgtccatgagttctagcaatcttt
tcctttctacacccttcccccacctctgccaggcttagagccattcagag
ccacacccacatttttaatgaatgctggaatctaaacttcaatcctctgt
ttatatacagcaagagctgttacccacagaaaacactcttgttattttcc
ttaagtcttaagcaggaattataacttttttttcttttggtttttgtttt
tgtttatttttacttaccttatagttgctttcaaataatgctatttattt
catatgcagtgcacataacttgaaaatttctcaccagctatttctgtttc
ttatgccatttctgccattttatttatctgttccctataatcaccaatca
cctggtgcattttaatattatttcatttttatgtatttatatgtattttt
tggtgctacaaattgagtaagtcttgcgcatagttggtagaaactttgtc
acagttacatcaccaaccctattattattttaattatctaatagctaata
gtttaatagttaacttttagggtaattaaaaagaaattctttgttttcac
tatattttcctcttctatgtagaatgtctgaactaatttacaactgtctt
acattaattgtagaaaatatgttttgttgcaagttctcctatgtgcagat
aatatccttgattattttaacccactcaccatgctgtctccttatttccc
tttctatgacccatttgttctttaatactccccctccccatttttatgct
ctcttttttcttctacgtgccacctacaaaagaaaacacacagtatttgt
ctttctgggtctagcttattttgctaaatgtaatgatctccaattccatc
cactttcctgcaaatgacataatctttcttctttatgactgactatcttt
ttttctttattcatccaattatggcaccaaggtggtttttgtaattcagc
tatttgttgaacagcatggcatgccatcatctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_67091622_67092822
seq2: B6Ng01-159P22.b_48_1236 (reverse)

seq1  TCTATGTTAGTATTTCCAAGTATTGCCATATC-AAAATGTCATAGTGCTG  49
      |||| ||||| |||||  |||| ||||||||| ||||| ||| |  ||||
seq2  TCTAGGTTAG-ATTTC--AGTACTGCCATATCAAAAATTTCA-ATGGCTG  46

seq1  GTATGTCT-ATAAATGTTATAAAGTATTAGTCCTAATAGATCACTCAATG  98
      |  ||||| |||||| |||| ||||| ||||||| |  |||| ||| |||
seq2  GGTTGTCTCATAAAT-TTAT-AAGTA-TAGTCCTTAAGGATCCCTC-ATG  92

seq1  GCTTTATAAACTTTCTATTTCTCTTTAGGTCTTTTATAGCATGTATATAT  148
      || |||||||| |  |||||||||||||||| ||||||||||||  ||||
seq2  GCCTTATAAACCTCTTATTTCTCTTTAGGTC-TTTATAGCATGTTAATAT  141

seq1  TTTCCAATCTTCAGATGCTAGTCCATCACTGAATGTTAGAAACCTAGAAG  198
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TTTCCAATCTTCAGATGCTAGTCCATCACTGAATG-TAGAAACCTAGAAG  190

seq1  TCCTTGCATTTCTTCCTTACGCTGAAAATGATAACATGCAGCATTTCACC  248
      ||| |||||||| ||||||||||||||||||| |||||||||||||||||
seq2  TCC-TGCATTTC-TCCTTACGCTGAAAATGAT-ACATGCAGCATTTCACC  237

seq1  ATTAATGCGATACTTGCTTTCATGTTCTGTAGTGTCTTTCCAGCTTGCTC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATGCGATACTTGCTTTCATGTTCTGTAGTGTCTTTCCAGCTTGCTC  287

seq1  ATGCCAGAAAAGCCC-TTCAGTTTTATCTAGCTCTCCAACTACTTCTTTT  347
      ||||||||||||||| ||||| ||||||||||||||||||||||||||||
seq2  ATGCCAGAAAAGCCCTTTCAG-TTTATCTAGCTCTCCAACTACTTCTTTT  336

seq1  CTGTTTTTAGAAGACAAATTTTAATTTAGACAGTCCTTGAAGTTTCTTTC  397
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTG-TTTTAGAAGACAAATTTTAATTTAGACAGTCCTTGAAGTTTCTTTC  385

seq1  TTACTTGGAAAGTAATAATGTTATAATTCTGGCCGTTTCCTTTATGTCCA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTGGAAAGTAATAATGTTATAATTCTGGCCGTTTCCTTTATGTCCA  435

seq1  CTCTTTGCAGTGAGCCAATATTTAATATCACATTATTTAAATCACACATG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTGCAGTGAGCCAATATTTAATATCACATTATTTAAATCACACATG  485

seq1  CGTGTATCATGGTGCCAACGTGGAGGTTAGGGGACAACCTGTGGTAATTG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTATCATGGTGCCAACGTGGAGGTTAGGGGACAACCTGTGGTAATTG  535

seq1  GTTCTCTTCTTGAACTATGTGAGTCCCAGGGATTGAACTCAGGTCATCAA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCTTCTTGAACTATGTGAGTCCCAGGGATTGAACTCAGGTCATCAA  585

seq1  GCTTGGTGGCTAGCACTCTCATGGGCTGAGCTATCGTTCTGGCCCTCATT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGGTGGCTAGCACTCTCATGGGCTGAGCTATCGTTCTGGCCCTCATT  635

seq1  TATTTTAAAGTAGTAAACCTTTCTTTCGTCATTCTTATCCCATTTTCTGT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTAAAGTAGTAAACCTTTCTTTCGTCATTCTTATCCCATTTTCTGT  685

seq1  TTTCAGTTTGAAGAATTTGTGTTTGCTTTTATAAGTAAGGTGAATGACAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGTTTGAAGAATTTGTGTTTGCTTTTATAAGTAAGGTGAATGACAA  735

seq1  ATTATCTTTTTATAGTACTTTGACTCTGGACATTTCATAAAGATCCCAGT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCTTTTTATAGTACTTTGACTCTGGACATTTCATAAAGATCCCAGT  785

seq1  GTGTTTTCTAAAAATTCATTACTATTCTCATTTCAATTGTCTGTGTTGGA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTTCTAAAAATTCATTACTATTCTCATTTCAATTGTCTGTGTTGGA  835

seq1  GTTTCTTAGATAGAGGTTATATCTGAGTTTCTGTAACAATATAAAATTTT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTTAGATAGAGGTTATATCTGAGTTTCTGTAACAATATAAAATTTT  885

seq1  CTGGGTATCAGGGCTCAAAAGAATTTATAATTTGACTTAGAGGTCTATTC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTATCAGGGCTCAAAAGAATTTATAATTTGACTTAGAGGTCTATTC  935

seq1  ATTTCTAAAAGTTCAATCGGATTTCTTTCAGTATGTCTATCTGGTTCAAT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTAAAAGTTCAATCGGATTTCTTTCAGTATGTCTATCTGGTTCAAT  985

seq1  ATGTCTATCTGGTTTCAATATGTCTATCTGGTTTCAATATGTCTATCTGG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTATCTGGTTTCAATATGTCTATCTGGTTTCAATATGTCTATCTGG  1035

seq1  TTCTTCCTTCTTGTCCTACACTGCCTTCCTTAGATCAGAAGGTGGTTTGT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCCTTCTTGTCCTACACTGCCTTCCTTAGATCAGAAGGTGGTTTGT  1085

seq1  ATTCTCCTTGAATTCATTCAGAAGTTTGTTTTACCCTCTTTCATCTTGTT  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCCTTGAATTCATTCAGAAGTTTGTTTTACCCTCTTTCATCTTGTT  1135

seq1  AAACTGCCTTATAATTATTACTTTTAGCTCTCTAACGTACTGCCCTTGGA  1197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGCCTTATAATTATTACTTTTAGCTCTCTAACGTACTGCCCTTGGA  1185

seq1  ATTC  1201
      ||||
seq2  ATTC  1189

seq1: chr18_66968399_66969430
seq2: B6Ng01-159P22.g_68_1101

seq1  GAATTCACTACTTTCAGCCAGGTTGATGTCCATGAGTTCTAGCAATCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTACTTTCAGCCAGGTTGATGTCCATGAGTTCTAGCAATCTTT  50

seq1  TCCTTTCTACACCCTTCCCCCACCTCTGCCAGGCTTAGAGCCATTCAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTCTACACCCTTCCCCCACCTCTGCCAGGCTTAGAGCCATTCAGAG  100

seq1  CCACACCCACATTTTTAATGAATGCTGGAATCTAAACTTCAATCCTCTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACCCACATTTTTAATGAATGCTGGAATCTAAACTTCAATCCTCTGT  150

seq1  TTATATACAGCAAGAGCTGTTACCCACAGAAAACACTCTTGTTATTTTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATACAGCAAGAGCTGTTACCCACAGAAAACACTCTTGTTATTTTCC  200

seq1  TTAAGTCTTAAGCAGGAATTATAACTTTTTTTTCTTTTGGTTTTTGTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTCTTAAGCAGGAATTATAACTTTTTTTTCTTTTGGTTTTTGTTTT  250

seq1  TGTTTATTTTTACTTACCTTATAGTTGCTTTCAAATAATGCTATTTATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTATTTTTACTTACCTTATAGTTGCTTTCAAATAATGCTATTTATTT  300

seq1  CATATGCAGTGCACATAACTTGAAAATTTCTCACCAGCTATTTCTGTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGCAGTGCACATAACTTGAAAATTTCTCACCAGCTATTTCTGTTTC  350

seq1  TTATGCCATTTCTGCCATTTTATTTATCTGTTCCCTATAATCACCAATCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGCCATTTCTGCCATTTTATTTATCTGTTCCCTATAATCACCAATCA  400

seq1  CCTGGTGCATTTTAATATTATTTCATTTTTATGTATTTATATGTATTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTGCATTTTAATATTATTTCATTTTTATGTATTTATATGTATTTTT  450

seq1  TGGTGCTACAAATTGAGTAAGTCTTGCGCATAGTTGGTAGAAACTTTGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGCTACAAATTGAGTAAGTCTTGCGCATAGTTGGTAGAAACTTTGTC  500

seq1  ACAGTTACATCACCAACCCTATTATTATTTTAATTATCTAATAGCTAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTACATCACCAACCCTATTATTATTTTAATTATCTAATAGCTAATA  550

seq1  GTTTAATAGTTAACTTTTAGGGTAATTAAAAAGAAATTCTTTGTTTTCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAATAGTTAACTTTTAGGGTAATTAAAAAGAAATTCTTTGTTTTCAC  600

seq1  TATATTTTCCTCTTCTATGTAGAATGTCTGAACTAATTTACAACTGTCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTTCCTCTTCTATGTAGAATGTCTGAACTAATTTACAACTGTCTT  650

seq1  ACATTAATTGTAGAAAATATGTTTTGTTGCAAGTTCTCCTATGTGCAGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTAATTGTAGAAAATATGTTTTGTTGCAAGTTCTCCTATGTGCAGAT  700

seq1  AATATCCTTGATTATTTTAACCCACTCACCATGCTGTCTCCTTATTTCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCCTTGATTATTTTAACCCACTCACCATGCTGTCTCCTTATTTCCC  750

seq1  TTTCTATGACCCATTTGTTCTTTAATACTCCCCCTCCCCATTTTTATGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTATGACCCATTTGTTCTTTAATACTCCCCCTCCCCATTTTTATGCT  800

seq1  CTCTTTTTTCTTCTACGTGCCACCTACAAAAGAAAACACACAGTATTTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTTTTCTTCTACGTGCCACCTACAAAAGAAAACACACAGTATTTGT  850

seq1  CTTTCTGGGTCTAGCTTATTTTGCTAAATGTAATGATCTCCAATTCCATC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTGGGTCTAGCTTATTTTGCTAAATGTAATGATCTCCAATTCCATC  900

seq1  CACTTTCCTGCAAATGACATAATCTTTCTTCTTTATGACTGACTATCCTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||| | 
seq2  CACTTTCCTGCAAATGACATAATCTTTCTTCTTTATGACTGACTATCTTT  950

seq1  TTTTCTTTATTCATCCAATTATGGCACCAAGGTTGATTGTGTAACTCAGC  1000
      ||||||||||||||||||||||||||||||||| | || ||||| |||||
seq2  TTTTCTTTATTCATCCAATTATGGCACCAAGGTGGTTTTTGTAATTCAGC  1000

seq1  TATT--GTGAACAGCATGGCATGCAATCATCTCT  1032
      ||||   ||||||||||||||||| |||||||||
seq2  TATTTGTTGAACAGCATGGCATGCCATCATCTCT  1034