BAC Information

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BAC

Clone NameB6Ng01-164L20
Chromosome18 (Build37)
Map Location 29,710,287 - 29,711,430
singlet/doubletsinglet
Overlap genenone
Upstream geneBC051408, LOC100040930, 4930578E11Rik
Downstream geneLOC666073, Pik3c3, LOC666094, LOC666100, EG666111, EG666114
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-164L20.bB6Ng01-164L20.g
ACCDH956983DH956984
length1,2411,137
definitionDH956983|Mus musculus domesticus DNA, BAC clone: B6Ng01-164L20, 5' end.DH956984|Mus musculus domesticus DNA, BAC clone: B6Ng01-164L20, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaagagtagatcacactgggccataaagcttcatcctttaaata
tgctgtttaccctggtttactactatgttggtatttgtttgtcatcaata
tttgaaacactttgtccttaagtttctttcctataactattttgttttaa
ttaggcctaaggcaatttttgtctcagatgattcctttgttaagagggaa
gaagaaatttcatgtgttagcttttctttaaatgctcaggagaattctcc
aatgagttcatcgggctcaagacttttctttgtcaaggaatctttgatta
ctgtctcaatcacttttctaattatagctctgtttagtttcacttctgtt
gctatgagaaaaatcaaataaacaaaacaataaaagacaagacaaaacaa
aaaaatcctgaccaaaagcaaaatataggagaatagtatattttacttca
caattcctggttagagtcaatcactcaagatagcatgcataactgtgatg
gctattccctattttcaacttgatttgaactacaatctagaagtaaaaag
cacacttgtgatcagaatcttgaggctggaagccacaggtctttaatcct
gatatgggtgtgggatgccacaggcttttgacccatatcttgaacatagt
ggccatgaaaagctttggcccagacaatgtgttgcatgcctttaatccca
ggagacctaggttagcagatctctgagatcaaggccagcctggggcaaag
aaagttccaagtaaagcaaagcttatttccaagtgtgggggccacacatc
tttaatctggaacattctttctactggaggcctacataagaatagtggaa
aggagaaaggtgttatggtttgtattatgctcagcccagggagtggcact
attggaaggtgtggccctgtttgaagtagatgtgaccttgttggagtagg
tacgtcactgtggatgtgggctttagattcttatgcttagcttcccatag
tcaggcttctcctagcagtcttcagatgagatgtagaactctcagcttct
tcagccccatggctgcctggacactgcatgcttctgccttggattatgga
ctgaccttcactgatatcagttcaattaaatgttattccttacaaatggc
ttggttcatggtgtctgttccaacagcaactcttatgaacagaaggttca
tctcttacccgtgccgtcgtacacgtattgtgactgcttat
gaattccatcctaagtatctccaagcaaacagtcattccagaggcaccta
agcatgtgtgatctctgggttcccactgccttttacagtcctcacctata
ccagcctcacgttaaacactgtttatgccgcctatgggtggctttttctc
tgaaagatgtcagaaataagcagtttggtggtgattcccaaataagtgga
ggttaaccatgttaaccaggcttataactgggtaccctaggctgagagtc
agagattatagatatgaacaattactggtgctaatatctggaaagcccag
atcacagcgcagaactgtgagctactgcagaaggcagtgttcttggctat
agactaccatcccaagggcgacaccagatgaaagtgctctcttgatatga
aaatgctctcctgatatgagggatacaatatgaaatagcttcaccaacta
ctgatttgaatgtgtggtgcccagatggtcccatttctttgataagctgt
ggacatcttgtaggactagcatattagtgggtcacaaggaatgttcctgg
ggctaaatcatctctgaccacttctgaaatgctccatacctcctaccatg
gtgggatgaactcactcaaactatgcagcaaaataagtctttttacaaat
tgtttgtttcaggtagttggtcgcactaacactaaaagtcactggacaca
ctggaatccccttcaaaaagtaagatcgattcctgagggtctcatcctca
tgatattattagccgacaaagcctccacctcctattgcttaatgttgggg
ctacactttctgcacacagatgtcaaggtctatcataagctctttctatg
caacaaatacagacaaggactaccaagtccagtggcatcagatggagtga
agttccatttcatccatgtttttatgtgtcagttatcaaaaatgtaagtt
ttatgtatttctcaatcttcgcaaaaatatatgcagcaattttctctttg
ctttgaagtttaaaaaaaatgagactaagagaaaactgtgtaatgcatct
taagctcagaacatttgctttatgtagcccaaagctttggaattattgca
acctctttcaaggttagcaatggattttttcatctta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_29710287_29711430
seq2: B6Ng01-164L20.g_68_1204

seq1  GAATTCCATCCTAAGTATCTCCAAGCAAACAGTCATTCCAGAGGCACCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATCCTAAGTATCTCCAAGCAAACAGTCATTCCAGAGGCACCTA  50

seq1  AGCATGTGTGATCTCTGGGTTCCCACTGCCTTTTACAGTCCTCACCTATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGTGTGATCTCTGGGTTCCCACTGCCTTTTACAGTCCTCACCTATA  100

seq1  CCAGCCTCACGTTAAACACTGTTTATGCCGCCTATGGGTGGCTTTTTCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCTCACGTTAAACACTGTTTATGCCGCCTATGGGTGGCTTTTTCTC  150

seq1  TGAAAGATGTCAGAAATAAGCAGTTTGGTGGTGATTCCCAAATAAGTGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGATGTCAGAAATAAGCAGTTTGGTGGTGATTCCCAAATAAGTGGA  200

seq1  GGTTAACCATGTTAACCAGGCTTATAACTGGGTACCCTAGGCTGAGAGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAACCATGTTAACCAGGCTTATAACTGGGTACCCTAGGCTGAGAGTC  250

seq1  AGAGATTATAGATATGAACAATTACTGGTGCTAATATCTGGAAAGCCCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATTATAGATATGAACAATTACTGGTGCTAATATCTGGAAAGCCCAG  300

seq1  ATCACAGCGCAGAACTGTGAGCTACTGCAGAAGGCAGTGTTCTTGGCTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACAGCGCAGAACTGTGAGCTACTGCAGAAGGCAGTGTTCTTGGCTAT  350

seq1  AGACTACCATCCCAAGGGCGACACCAGATGAAAGTGCTCTCTTGATATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTACCATCCCAAGGGCGACACCAGATGAAAGTGCTCTCTTGATATGA  400

seq1  AAATGCTCTCCTGATATGAGGGATACAATATGAAATAGCTTCACCAACTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCTCTCCTGATATGAGGGATACAATATGAAATAGCTTCACCAACTA  450

seq1  CTGATTTGAATGTGTGGTGCCCAGATGGTCCCATTTCTTTGATAAGCTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTTGAATGTGTGGTGCCCAGATGGTCCCATTTCTTTGATAAGCTGT  500

seq1  GGACATCTTGTAGGACTAGCATATTAGTGGGTCACAAGGAATGTTCCTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATCTTGTAGGACTAGCATATTAGTGGGTCACAAGGAATGTTCCTGG  550

seq1  GGCTAAATCATCTCTGACCACTTCTGAAATGCTCCATACCTCCTACCATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAAATCATCTCTGACCACTTCTGAAATGCTCCATACCTCCTACCATG  600

seq1  GTGGGATGAACTCACTCAAACTATGCAGCAAAATAAGTCTTTTTACAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGATGAACTCACTCAAACTATGCAGCAAAATAAGTCTTTTTACAAAT  650

seq1  TGTTTGTTTCAGGTAGTTGGTCGCACTAACACTAAAAGTCACTGGACACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTTTCAGGTAGTTGGTCGCACTAACACTAAAAGTCACTGGACACA  700

seq1  CTGGAATCCCCTTCAAAAAGTAAGATCGATTCCTGAGGGTCTCATCCTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAATCCCCTTCAAAAAGTAAGATCGATTCCTGAGGGTCTCATCCTCA  750

seq1  TGATATTATTAGCCGACAAAGCCTCCACCTCCTATTGCTTAATGTTGGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATTATTAGCCGACAAAGCCTCCACCTCCTATTGCTTAATGTTGGGG  800

seq1  CTACACTTTCTGCACACAGATGTCAAGGTCTATCATAAGCTCTTTCTATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACACTTTCTGCACACAGATGTCAAGGTCTATCATAAGCTCTTTCTATG  850

seq1  CAACAAATACAGACAAGGACTACCAAGTCCAGTGGCATCAGATGGAGTGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAATACAGACAAGGACTACCAAGTCCAGTGGCATCAGATGGAGTGA  900

seq1  AGTTCCATTTCATCCATGTTTTTATGTGTCAGGTTATCAAAAATGTAAGT  950
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  AGTTCCATTTCATCCATGTTTTTATGTGTCA-GTTATCAAAAATGTAAGT  949

seq1  TTTATGTATTTCTCAATC-TCGCAAAAATATATGCAGGCAAATTTTCTCT  999
      |||||||||||||||||| ||||||||||||||||||   ||||||||||
seq2  TTTATGTATTTCTCAATCTTCGCAAAAATATATGCAG--CAATTTTCTCT  997

seq1  TTGCTTGGAAGTTTTAAAAAAAATGAGACTAAGAG-ACACTGTGAAATGC  1048
      |||||| |||| ||||||||||||||||||||||| | |||||| |||||
seq2  TTGCTTTGAAG-TTTAAAAAAAATGAGACTAAGAGAAAACTGTGTAATGC  1046

seq1  ATC-TAAGCTTCAG-ACATTTTGGCTTTATGTAGCCCAAAGGCTTTGAA-  1095
      ||| ||||| |||| ||||||  ||||||||||||||||||  || ||| 
seq2  ATCTTAAGC-TCAGAACATTT--GCTTTATGTAGCCCAAAGCTTTGGAAT  1093

seq1  TATTGCAAACTCTCTTTCAAGTATTAGCAAATAGTATATTTTCATCTTA  1144
      ||||||||   ||||||||||  |||||||   | || |||||||||||
seq2  TATTGCAA--CCTCTTTCAAG-GTTAGCAA--TGGATTTTTTCATCTTA  1137