BAC Information

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BAC

Clone NameB6Ng01-165O15
Chromosome18 (Build37)
Map Location 90,052,337 - 90,053,400
singlet/doubletsinglet
Overlap genenone
Upstream geneSocs6, Rttn, Cd226, Dok6
Downstream geneLOC383320, LOC620693, Eif3s6-ps2, LOC665526, Txndc10, LOC666779
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-165O15.bB6Ng01-165O15.g
ACCDH957843DH957844
length9181,067
definitionDH957843|Mus musculus domesticus DNA, BAC clone: B6Ng01-165O15, 5' end.DH957844|Mus musculus domesticus DNA, BAC clone: B6Ng01-165O15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaataccaaagggctgagaagcacttgaaaaaagt
tcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagatt
taacctcacaccagtcagaatggctaggatcaaaaattcaggtgacagca
gatgctggtgaggatgtgaagaaagaggaacactcctccattgctggtgg
gattgcaagcttgtacaaccactctggaaatcagtctggagattcctcag
aaaaccggacatagtactaccggcagatccaacaatacctctcctaggca
tacacccagatgttccaactggtaataaggacacatgctccactatgttc
atagcagccctatttataatagccagaagctggaaagaacccagatgtcc
ctcaacagaggaatggatacagaaaatgtgattcacttgcacaatggagt
acttctcagctattaaaaacaatgaattcatgaaattcttaggcaaatag
atagatctggaggatatcatcctaagtgaggtaacccaatctcaaaagaa
gtcacttgatatgcactcactggtaagtggatattagcccagaaacttag
aatacccaagatacaatttccaaaacacagaaaatcaagaaggaagagca
acatgtggatacttttttcctccctagaatagggaataaaatacccatgg
gaagagttgcagagacaaagttggagctaagataaaaggatggaccatcc
acagactgccccacctgggggtccatcccataatcagccaccaaaggcag
acatattgcatatgccagcaagattttgctgaaaggaccctgatatagct
gtctcctgtgaggctatgccagttgcctagcaaataaagaagtggatgct
cacagtcatcattggaat

gaattctggattaatttttttgtggtgagtgagtgaccccattcctcaac
ctggggctgtgcttatccactggatatggtctctacaggttttctctccc
ctttgttgggtattttggctaatgtcctccctgttgggtcctgagaaact
gttgggtccttggtatctggaactttctagtgactaccctaagttccccc
tccccaactgctataggaatttgaaagtaggtgaaatatttgtttttatg
tataatgtaaaaatgtataaaaatgtatttctatgtataaacaatctaag
agagctagaaggagaaaaatttatagtgggtgaaatgaaacatttatctt
tgcataatttgaagagcaaacacacaatacataatattactagaggtgac
ctcaaaatactaaaaatgtaatcattaacatccttttagtttgtggacag
tttactgtagagaatcagttactcctctcattgtcaaatacccaacaaaa
gcaaactgaaggtaaaaagcatttatctgtgcttataggaagatacattc
catggaaaaaaagcaagaaatttggtctctgatcccattatgtctaaagt
caggaagcagagaattgtcaagaaggattgtccccctgactcatttcctt
taacaaggctctgtctcctaagggattaccaaccttttgaagtagtgcta
gtagctaggaagcaagtgttcaaactcatcagcctttatcagacatctag
cagacctagtataatatctctcagtaaatgtaaaatgatcaaaactatat
gaaatattatgctagcatacaggattcaaacataagcacaattccaagat
ttttcctgattatgtatctaaaggcagacttacaaaagatagatataact
gaccccccttcttgggtggtaatgaaactcaaacatgtggtcttgattat
cacagcagaggagaaccatcagatttaagacactcttgggtttggctagt
gacaatccacacctttcttttcttcttccttaaaaaatatttttcatggc
atgtgctctctttgggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_90052337_90053400
seq2: B6Ng01-165O15.g_68_1134 (reverse)

seq1  ACCCAAAGAG---ACATG-CATGAAAAATATTTTTTTAAAGGAAGAAGGA  46
      ||||||||||   ||||| |||||||||||||||||  ||||||||| ||
seq2  ACCCAAAGAGAGCACATGCCATGAAAAATATTTTTT--AAGGAAGAA-GA  47

seq1  AAAGAAA-GTGT-GATGGTC-TTAGCCAAA-CCAAGAGTGTCTTAAATCT  92
      ||||||| |||| ||| |||  |||||||| |||||||||||||||||||
seq2  AAAGAAAGGTGTGGATTGTCACTAGCCAAACCCAAGAGTGTCTTAAATCT  97

seq1  GATGGTTCTCCTTCTGCTGTGATAATCAAGACCACATGTTTGAGTTTCAT  142
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GATGGTTCTCC-TCTGCTGTGATAATCAAGACCACATGTTTGAGTTTCAT  146

seq1  TACCACCCAAGAAGGGGGGGTCAGTTATATCTATCTTTTGTAAGTCTGCC  192
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TACCACCCAAGAA-GGGGGGTCAGTTATATCTATCTTTTGTAAGTCTGCC  195

seq1  TTTAGATACATAATCAGGAAAAATCTTGGAATTGTGCTTATGTTTGAATC  242
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGATACATAATCAGGAAAAATCTTGGAATTGTGCTTATGTTTGAATC  245

seq1  CTGTATGCTAGCATAATATTTCATATAGTTTTGATCATTTTACATTTACT  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATGCTAGCATAATATTTCATATAGTTTTGATCATTTTACATTTACT  295

seq1  GAGAGATATTATACTAGGTCTGCTAGATGTCTGATAAAGGCTGATGAGTT  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGATATTATACTAGGTCTGCTAGATGTCTGATAAAGGCTGATGAGTT  345

seq1  TGAACACTTGCTTCCTAGCTACTAGCACTACTTCAAAAGGTTGGTAATCC  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACACTTGCTTCCTAGCTACTAGCACTACTTCAAAAGGTTGGTAATCC  395

seq1  CTTAGGAGACAGAGCCTTGTTAAAGGAAATGAGTCAGGGGGACAATCCTT  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGGAGACAGAGCCTTGTTAAAGGAAATGAGTCAGGGGGACAATCCTT  445

seq1  CTTGACAATTCTCTGCTTCCTGACTTTAGACATAATGGGATCAGAGACCA  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGACAATTCTCTGCTTCCTGACTTTAGACATAATGGGATCAGAGACCA  495

seq1  AATTTCTTGCTTTTTTTCCATGGAATGTATCTTCCTATAAGCACAGATAA  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCTTGCTTTTTTTCCATGGAATGTATCTTCCTATAAGCACAGATAA  545

seq1  ATGCTTTTTACCTTCAGTTTGCTTTTGTTGGGTATTTGACAATGAGAGGA  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTTTTACCTTCAGTTTGCTTTTGTTGGGTATTTGACAATGAGAGGA  595

seq1  GTAACTGATTCTCTACAGTAAACTGTCCACAAACTAAAAGGATGTTAATG  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACTGATTCTCTACAGTAAACTGTCCACAAACTAAAAGGATGTTAATG  645

seq1  ATTACATTTTTAGTATTTTGAGGTCACCTCTAGTAATATTATGTATTGTG  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACATTTTTAGTATTTTGAGGTCACCTCTAGTAATATTATGTATTGTG  695

seq1  TGTTTGCTCTTCAAATTATGCAAAGATAAATGTTTCATTTCACCCACTAT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGCTCTTCAAATTATGCAAAGATAAATGTTTCATTTCACCCACTAT  745

seq1  AAATTTTTCTCCTTCTAGCTCTCTTAGATTGTTTATACATAGAAATACAT  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTTTCTCCTTCTAGCTCTCTTAGATTGTTTATACATAGAAATACAT  795

seq1  TTTTATACATTTTTACATTATACATAAAAACAAATATTTCACCTACTTTC  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATACATTTTTACATTATACATAAAAACAAATATTTCACCTACTTTC  845

seq1  AAATTCCTATAGCAGTTGGGGAGGGGGAACTTAGGGTAGTCACTAGAAAG  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCCTATAGCAGTTGGGGAGGGGGAACTTAGGGTAGTCACTAGAAAG  895

seq1  TTCCAGATACCAAGGACCCAACAGTTTCTCAGGACCCAACAGGGAGGACA  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGATACCAAGGACCCAACAGTTTCTCAGGACCCAACAGGGAGGACA  945

seq1  TTAGCCAAAATACCCAACAAAGGGGAGAGAAAACCTGTAGAGACCATATC  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCCAAAATACCCAACAAAGGGGAGAGAAAACCTGTAGAGACCATATC  995

seq1  CAGTGGATAAGCACAGCCCCAGGTTGAGGAATGGGGTCACTCACTCACCA  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGATAAGCACAGCCCCAGGTTGAGGAATGGGGTCACTCACTCACCA  1045

seq1  CAAAAAAATTAATCCAGAATTC  1064
      ||||||||||||||||||||||
seq2  CAAAAAAATTAATCCAGAATTC  1067


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