BAC Information

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BAC

Clone NameB6Ng01-167A16
Chromosome18 (Build37)
Map Location 57,081,340 - 57,194,111
singlet/doubletdoublet
Overlap geneMarch3, C330018D20Rik
Upstream geneLOC100043099, LOC629057, LOC100043104, LOC676543, LOC667432, Gramd3, LOC667458, Aldh7a1, Rnuxa, 1700065I17Rik, LOC675171, Lmnb1
Downstream geneMegf10, LOC672445, Prrc1, 1700011I03Rik, 4930511M06Rik, 2210409D07Rik, Slc12a2, 9330166H04Rik, Fbn2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-167A16.bB6Ng01-167A16.g
ACCDH958646DH958647
length4261,063
definitionDH958646|Mus musculus domesticus DNA, BAC clone: B6Ng01-167A16, 5' end.DH958647|Mus musculus domesticus DNA, BAC clone: B6Ng01-167A16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(57,193,685 - 57,194,111)(57,081,340 - 57,082,399)
sequence
gaattcagaggccacaggcctaggacccctggaactggaattgtagacag
tgtttaccctccatgtaagtgtggggaactgaacttaggtcctcaggaag
aacagcaagtgctcttaaccactgagccatctctccagcccgatggtaaa
caaatgaaagaagtcacttagatgcatgggaatacgtcactatgctgtga
taggaaaacaatgtgaaacatgcgcagaaattttcataaagttttaaaaa
ttgatgttaaatggctggcttatgtagaccaatagtaatggtctgacata
aagtaaggaatacgattaacagaagcttctgaattctgactaatgagatg
aaaggatgatagatagatagatagatagatagatagatagatagatagat
agatagatggatggatgataggtaag
gaattcctcatgtaggctttgtccccaattgtgctccgtgacctttcgca
aactatttgcctctctatgtcaaggttggctgattaagctcggggtcacc
caaatattcatcacacacgctggttaacttcataaggaaaacttagaaag
tcaagtccaatagaaagagaaatggaaaggaaaatggtttcagaagatgt
gttctcacaaagtaaacacaggcaggcagctcacagtgtaagaccaacat
ccgacttactggtattgtcttgaagcatgacagacagaagccacgcctca
tgcttttgtggccgttctttgctcatctggaactaaggggggggggggaa
tcattgtcctctaaagattgttgagtggcctatcaaatgccaagtagtcc
tcagaacagaaattgctccataaacgtgtccgtaatgatccaatgatctg
gaactatataagtcaatctctcaacctacttaaatcccttcgtcatcaag
gaagtaaatagtcttgacatttctgacctctgagattttttttttttaaa
cttgaatgttagagaggacaacttctgatacagacacattctctttcaaa
cctcacctaaaagtctaatgtagacaattttatcagtatggaatagaaga
acgaaacacagaatgcacatgtcaggatcagaaggttgagtaaaaaaaga
ctaattgttaataatttataaataaaaactaacccagatttcagtaagaa
tacagctaaacagtgtattttcaatttctgaggaacagcttaaagtaaat
ctaaatttactttcagagtgtatcatggtgggtggggctcatggctggtc
agcccaagtagctagagtttcccgaggaaacacttgattccgtttaagtc
cgtgctagccctgaattatgtgcatacttctgtcctagcaccagaaatta
aaaggggctctcttttcttcctctgggagaattgaagggacgatgtgcat
tagggttggtcgaatcagcccagatcatccagcattctcttgttacagaa
acgacagcagaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_57193685_57194111
seq2: B6Ng01-167A16.b_47_472 (reverse)

seq1  CTTACCTATCATCCATCCATCTATCTATCTATCTATCTATCTATCTATCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACCTATCATCCATCCATCTATCTATCTATCTATCTATCTATCTATCT  50

seq1  ATCTATCTATCTATCTATCATCCTTTCATCTCATTAGTCAGAATTCAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATCTATCTATCTATCATCCTTTCATCTCATTAGTCAGAATTCAGAA  100

seq1  GCTTCTGTTAATCGTATTCCTTTACTTTATGTCAGACCATTACTATTGGT  150
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GCTTCTGTTAATCGTATTCC-TTACTTTATGTCAGACCATTACTATTGGT  149

seq1  CTACATAAGCCAGCCATTTAACATCAATTTTTAAAACTTTATGAAAATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATAAGCCAGCCATTTAACATCAATTTTTAAAACTTTATGAAAATTT  199

seq1  CTGCGCATGTTTCACATTGTTTTCCTATCACAGCATAGTGACGTATTCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCGCATGTTTCACATTGTTTTCCTATCACAGCATAGTGACGTATTCCC  249

seq1  ATGCATCTAAGTGACTTCTTTCATTTGTTTACCATCGGGCTGGAGAGATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATCTAAGTGACTTCTTTCATTTGTTTACCATCGGGCTGGAGAGATG  299

seq1  GCTCAGTGGTTAAGAGCACTTGCTGTTCTTCCTGAGGACCTAAGTTCAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGTGGTTAAGAGCACTTGCTGTTCTTCCTGAGGACCTAAGTTCAGT  349

seq1  TCCCCACACTTACATGGAGGGTAAACACTGTCTACAATTCCAGTTCCAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCACACTTACATGGAGGGTAAACACTGTCTACAATTCCAGTTCCAGG  399

seq1  GGTCCTAGGCCTGTGGCCTCTGAATTC  427
      |||||||||||||||||||||||||||
seq2  GGTCCTAGGCCTGTGGCCTCTGAATTC  426

seq1: chr18_57081340_57082399
seq2: B6Ng01-167A16.g_69_1131

seq1  GAATTCCTCATGTAGGCTTTGTCCCCAATTGTGCTCCGTGACCTTTCGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCATGTAGGCTTTGTCCCCAATTGTGCTCCGTGACCTTTCGCA  50

seq1  AACTATTTGCCTCTCTATGTCAAGGTTGGCTGATTAAGCTCGGGGTCACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATTTGCCTCTCTATGTCAAGGTTGGCTGATTAAGCTCGGGGTCACC  100

seq1  CAAATATTCATCACACACGCTGGTTAACTTCATAAGGAAAACTTAGAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATATTCATCACACACGCTGGTTAACTTCATAAGGAAAACTTAGAAAG  150

seq1  TCAAGTCCAATAGAAAGAGAAATGGAAAGGAAAATGGTTTCAGAAGATGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTCCAATAGAAAGAGAAATGGAAAGGAAAATGGTTTCAGAAGATGT  200

seq1  GTTCTCACAAAGTAAACACAGGCAGGCAGCTCACAGTGTAAGACCAACAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCACAAAGTAAACACAGGCAGGCAGCTCACAGTGTAAGACCAACAT  250

seq1  CCGACTTACTGGTATTGTCTTGAAGCATGACAGACAGAAGCCACGCCTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGACTTACTGGTATTGTCTTGAAGCATGACAGACAGAAGCCACGCCTCA  300

seq1  TGCTTTTGTGGCCGTTCTTTGCTCATCTGGAACTAAGGGGGGGGGGGGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTTGTGGCCGTTCTTTGCTCATCTGGAACTAAGGGGGGGGGGGGAA  350

seq1  TCATTGTCCTCTAAAGATTGTTGAGTGGCCTATCAAATGCCAAGTAGTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGTCCTCTAAAGATTGTTGAGTGGCCTATCAAATGCCAAGTAGTCC  400

seq1  TCAGAACAGAAATTGCTCCATAAACGTGTCCGTAATGATCCAATGATCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAACAGAAATTGCTCCATAAACGTGTCCGTAATGATCCAATGATCTG  450

seq1  GAACTATATAAGTCAATCTCTCAACCTACTTAAATCCCTTCGTCATCAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTATATAAGTCAATCTCTCAACCTACTTAAATCCCTTCGTCATCAAG  500

seq1  GAAGTAAATAGTCTTGACATTTCTGACCTCTGAGATTTTTTTTTTTTAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTAAATAGTCTTGACATTTCTGACCTCTGAGATTTTTTTTTTTTAAA  550

seq1  CTTGAATGTTAGAGAGGACAACTTCTGATACAGACACATTCTCTTTCAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAATGTTAGAGAGGACAACTTCTGATACAGACACATTCTCTTTCAAA  600

seq1  CCTCACCTAAAAGTCTAATGTAGACAATTTTATCAGTATGGAATAGAAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACCTAAAAGTCTAATGTAGACAATTTTATCAGTATGGAATAGAAGA  650

seq1  ACGAAACACAGAATGCACATGTCAGGATCAGAAGGTTGAGTAAAAAAAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAAACACAGAATGCACATGTCAGGATCAGAAGGTTGAGTAAAAAAAGA  700

seq1  CTAATTGTTAATAATTTATAAATAAAAACTAACCCAGATTTCAGTAAGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTGTTAATAATTTATAAATAAAAACTAACCCAGATTTCAGTAAGAA  750

seq1  TACAGCTAAACAGTGTATTTTCAATTTCTGAGGAACAGCTTAAAGTAAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGCTAAACAGTGTATTTTCAATTTCTGAGGAACAGCTTAAAGTAAAT  800

seq1  CTAAATTAACTTTCAGAGTGTATCATGGTGGGTGGGGCTCATGGCTGGTC  850
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATTTACTTTCAGAGTGTATCATGGTGGGTGGGGCTCATGGCTGGTC  850

seq1  AG-CCAAGTAGCTAGAGTTTCCCGAGGAAACACTTGATTCCGTTTAAGTC  899
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCAAGTAGCTAGAGTTTCCCGAGGAAACACTTGATTCCGTTTAAGTC  900

seq1  CGTGCTAGCCCTG-ATTATGTGCATACTTCTGTCCTAGCACCAAGAGATA  948
      ||||||||||||| |||||||||||||||||||||||||||||  |  ||
seq2  CGTGCTAGCCCTGAATTATGTGCATACTTCTGTCCTAGCACCAGAAATTA  950

seq1  AAAAGGGCTCTCTTTTCAT-CTCTTGGAGAAATGAAGGAACGATGTGCAT  997
      ||| ||||||||||||| | |||| |||||| |||||| |||||||||||
seq2  AAAGGGGCTCTCTTTTCTTCCTCTGGGAGAATTGAAGGGACGATGTGCAT  1000

seq1  TAGGGTTGGCCGAGTCAGCCCAGAACATCCCAGCA-TCTC-TGGTACAGA  1045
      ||||||||| ||| |||||||||| ||| |||||| |||| || ||||||
seq2  TAGGGTTGGTCGAATCAGCCCAGATCAT-CCAGCATTCTCTTGTTACAGA  1049

seq1  AACAGACAGCAGAGA  1060
      ||| |||||||||||
seq2  AAC-GACAGCAGAGA  1063