BAC Information

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BAC

Clone NameB6Ng01-173B05
Chromosome18 (Build37)
Map Location 85,181,343 - 85,182,183
singlet/doubletsinglet
Overlap genenone
Upstream geneTshz1, Zadh2, LOC669856, Zfp407, Cndp1, EG640234, Cndp2, LOC100039711, LOC100039725, B230399E16Rik, Cyb5, Fbxo15, 1700034H14Rik
Downstream geneLOC100039765, LOC665382, LOC545269
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-173B05.bB6Ng01-173B05.g
ACCGA001523GA001524
length1,179842
definitionB6Ng01-173B05.b B6Ng01-173B05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcataccagtcagaatggataagatcaaaaattcaggtgacagc
agatgctggcatggatgtggagaaagaggaacactccttcattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatcccgcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccaagagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagattagggaa
caaaacacccatggaagtagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccttatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtcttcttgtgagactatgccggagcctagcaaa
cacagaaagtggatgcccacaagtcagctaatgggatggatcacaggggc
cccatggaggagctagagaaaagtacccaaggagctaaaggatctgcaac
cctaataggtggaacaacaattatgaactaaccagtaccccggagctcct
tgactcttagcttgcatattgtattcaaaagatgcttagtcgggcatcac
tgggaagaagaggccatggaactgccaacttttatatgccagtaaggtac
gctaggtcaaaagaaaattcttgtcagac
gaattctacttgacagtggtggatgatctttttgatgtgttcttagattt
gtgtacaagtattttattgaatattttttgcatcaatattcataagagaa
atttgtctgtaattgtctttctttgttttgtatttatatactttagacat
cagagtaactggcaatgtggaaaaatttaaacaaaataggcattaactct
tttttgaaagtctggtagaattctgtgctgaaactatctggccctaggct
ttttttttttttttcttctttttgattggaagacttttaatgactgattc
tatttcactagaagctataggtctatttaaaccattcatctgatcttgat
ttaactttgctaagtggtaccaatggggaaaattatccatttcttttgga
ctttccaatttggtagggtaaggttgagagaaaaagttttttactatttt
gatttattgaaaattaaaatattccatcaaattacctgagaattcaggta
gcagagatatataacatgtccattccttcacaaggtctcaagttagtcct
ataaggacataaaatgatatacatatgtgtgtacgctatgccattttagc
cactcctactttaagtacctaataagacaagtatagaatcagctttgtgg
tactgaggtaatattgggaccttccctcaatatgactatatgtgtttaaa
agtcaaatgtgaatattatgtaaggtctcaaatcaatcaatcccatttga
attacggattcaaagcaccatattagacatgtgtccaaaagaattgcctt
cacggagccatacatggtgtatgtatgaggatgtgtattgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_85181343_85182183
seq2: B6Ng01-173B05.g_68_909

seq1  GAATTCTACTTGACAGTGGTGGATGATCTTTTTGATGTGTTCTTAGATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACTTGACAGTGGTGGATGATCTTTTTGATGTGTTCTTAGATTT  50

seq1  GTGTACAAGTATTTTATTGAATATTTTTTGCATCAATATTCATAAGAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTACAAGTATTTTATTGAATATTTTTTGCATCAATATTCATAAGAGAA  100

seq1  ATTTGTCTGTAATTGTCTTTCTTTGTTTTGTATTTATATACTTTAGACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTCTGTAATTGTCTTTCTTTGTTTTGTATTTATATACTTTAGACAT  150

seq1  CAGAGTAACTGGCAATGTGGAAAAATTTAAACAAAATAGGCATTAACTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTAACTGGCAATGTGGAAAAATTTAAACAAAATAGGCATTAACTCT  200

seq1  TTTTTGAAAGTCTGGTAGAATTCTGTGCTGAAACTATCTGGCCCTAGGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGAAAGTCTGGTAGAATTCTGTGCTGAAACTATCTGGCCCTAGGCT  250

seq1  TTTTTTTTTTTTTTCTTCTTTTTGATTGGAAGACTTTTAATGACTGATTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTCTTCTTTTTGATTGGAAGACTTTTAATGACTGATTC  300

seq1  TATTTCACTAGAAGCTATAGGTCTATTTAAACCATTCATCTGATCTTGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCACTAGAAGCTATAGGTCTATTTAAACCATTCATCTGATCTTGAT  350

seq1  TTAACTTTGCTAAGTGGTACCAATGGGGAAAATTATCCATTTCTTTTGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTTTGCTAAGTGGTACCAATGGGGAAAATTATCCATTTCTTTTGGA  400

seq1  CTTTCCAATTTGGTAGGGTAAGGTTGAGAGAAAAAGTTTTTTACTATTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCAATTTGGTAGGGTAAGGTTGAGAGAAAAAGTTTTTTACTATTTT  450

seq1  GATTTATTGAAAATTAAAATATTCCATCAAATTACCTGAGAATTCAGGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTATTGAAAATTAAAATATTCCATCAAATTACCTGAGAATTCAGGTA  500

seq1  GCAGAGATATATAACATGTCCATTCCTTCACAAGGTCTCAAGTTAGTCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGATATATAACATGTCCATTCCTTCACAAGGTCTCAAGTTAGTCCT  550

seq1  ATAAGGACATAAAATGATATACATATGTGTGTACGCTATGCCATTTTAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGACATAAAATGATATACATATGTGTGTACGCTATGCCATTTTAGC  600

seq1  CACTCCTACTTTAAGTACCTAATAAGACAAGTATAGAATCAGCTTTGTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCCTACTTTAAGTACCTAATAAGACAAGTATAGAATCAGCTTTGTGG  650

seq1  TACTGAGGTAATATTGGGACCTTCCCTCAATATGACTATATGTGTTT-AA  699
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TACTGAGGTAATATTGGGACCTTCCCTCAATATGACTATATGTGTTTAAA  700

seq1  AGTCAAATGTGAATATTATGTAAGGTCTCAAATCAATCAATCCCATTTGA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAAATGTGAATATTATGTAAGGTCTCAAATCAATCAATCCCATTTGA  750

seq1  ATTACGGATTCAAAGCACCATATTAGACATGTGTCC-AAAGAATTGCCTT  798
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  ATTACGGATTCAAAGCACCATATTAGACATGTGTCCAAAAGAATTGCCTT  800

seq1  CACGGAGCCATACATGGTGTATGTATGAGGATGTGTATGTGTG  841
      |||||||||||||||||||||||||||||||||||||| ||||
seq2  CACGGAGCCATACATGGTGTATGTATGAGGATGTGTAT-TGTG  842