BAC Information

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BAC

Clone NameB6Ng01-174F17
Chromosome18 (Build37)
Map Location 84,434,961 - 84,599,878
singlet/doubletdoublet
Overlap geneZfp407
Upstream gene4921531P14Rik, LOC665284, Tshz1, Zadh2, LOC669856
Downstream geneCndp1, EG640234, Cndp2, LOC100039711, LOC100039725, B230399E16Rik, Cyb5, Fbxo15, 1700034H14Rik, LOC100039765
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-174F17.bB6Ng01-174F17.g
ACCGA002460GA002461
length1731,050
definitionB6Ng01-174F17.b B6Ng01-174F17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(84,434,961 - 84,435,133)(84,598,832 - 84,599,878)
sequence
tcaaagaactaataaaaaagaaatattccattgaaaacattcaggaagtg
agcaagctcatggtctctttatgtaaaagtacagaagaacacttaaattg
agaaaataagtttttaaatttaaaaaattacatttaatgtgtggtgtgtg
tgtgtgtgtgtgtgtgtgtgtgt
gaattcctggagttagctataaatgcatttttttgttgtccatctctggt
tggaggagacgaggatttatcattgtaatctattttacatttataaaggc
tcctcccctttgtgtgtgtggctttataagcatcacagaagccgtggttt
gatttaccttttctttgggaacaacgttcatcaattccattaaagctttt
ccttacctataatttcgcaagcttgctatattttaatttttccaggacag
tataattggtttatttttcatgttcaggatttgattctactctctaatgc
cttgcatattgcagaaaaatatataatagaagctagttaaataagctgtg
acaattaaattaataatgcattttgttagtatttaggcctcgtgttttga
gtgatatatgcaaaaatggtaatttattaaaaacaaagtcacatttttct
actataaagtttggtgaagcaataaagtttgtcagcataactggcatttt
aagaaaagaaaaaaaaaagtaaatttcacagtggtttttgagaccttaca
aatacttgacatgatggtagctttcacaagagtcaaattttttaacctaa
attttcatcaactcactgtactttaatgtaacatagcaattgtgaggtat
tttacatttaaatacaagtaactgaatgttgccacatccagcttgtgttt
ttaagtaataaacttcaattaagttaagtacattctaaataatttttgtt
ctaatgagcatctattacagatgtgaatgaaaatgtcttttataacacct
tgattttgctcataatattcttgaccatccctttttatacatttataaca
acaagttaaggcatagtatgtgtgtgtttctatgagtgtcaggtctgtgt
gacatggagtgtctgtgttagtataaagtcagcgactctgaacagtggtt
gaagagaagagcggccttgcttgcttcagattgcaatctgcttctttgat
tcttttatgtctctacacattgttgtgtgtgtggtgtgtgtgagagggag

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_84434961_84435133
seq2: B6Ng01-174F17.b_46_218

seq1  TCAAAGAACTAATAAAAAAGAAATATTCCATTGAAAACATTCAGGAAGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGAACTAATAAAAAAGAAATATTCCATTGAAAACATTCAGGAAGTG  50

seq1  AGCAAGCTCATGGTCTCTTTATGTAAAAGTACAGAAGAACACTTAAATTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGCTCATGGTCTCTTTATGTAAAAGTACAGAAGAACACTTAAATTG  100

seq1  AGAAAATAAGTTTTTAAATTTAAAAAATTACATTTAATGTGTGGTGTGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATAAGTTTTTAAATTTAAAAAATTACATTTAATGTGTGGTGTGTG  150

seq1  TGTGTGTGTGTGTGTGTGTGTGT  173
      |||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGT  173

seq1: chr18_84598832_84599878
seq2: B6Ng01-174F17.g_68_1117 (reverse)

seq1  CTCTCTCTCTCACACACA-CACACACACAACAATGGTGTAGAGACATAAA  49
        ||| |||||||||||| ||||||||||||||| |||||||||||||||
seq2  --CTCCCTCTCACACACACCACACACACAACAAT-GTGTAGAGACATAAA  47

seq1  AGAATCAAAGAAGCAGATGGCAATCTGAAGCAAAGCAGGCCGCTCTTCTC  99
      |||||||||||||||||| ||||||||||||||   ||||||||||||||
seq2  AGAATCAAAGAAGCAGATTGCAATCTGAAGCAAGCAAGGCCGCTCTTCTC  97

seq1  TTC-ACCACTGTTCAGAGTCGCTGACTTTATACT-ACACAGACACTCCAT  147
      ||| |||||||||||||||||||||||||||||| |||||||||||||||
seq2  TTCAACCACTGTTCAGAGTCGCTGACTTTATACTAACACAGACACTCCAT  147

seq1  GTCACACAGACCTGACACTCATAG-AACACACACATACTATGCCTTAACT  196
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GTCACACAGACCTGACACTCATAGAAACACACACATACTATGCCTTAACT  197

seq1  TGTTGTTATAAATGTATAAAA--GGATGGTCAAGAATATTATGAGCAAAA  244
      |||||||||||||||||||||  |||||||||||||||||||||||||||
seq2  TGTTGTTATAAATGTATAAAAAGGGATGGTCAAGAATATTATGAGCAAAA  247

seq1  TCAAGGTGTTAT-AAAGACATTTTCATTCACATCTGTAATAGATGCTCAT  293
      |||||||||||| |||||||||||||||||||||||||||||||||||| 
seq2  TCAAGGTGTTATAAAAGACATTTTCATTCACATCTGTAATAGATGCTCA-  296

seq1  TTAGAACAAAAATTATTTAGAATGTACTTAACTTAATTGAAGTTTATTAC  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAACAAAAATTATTTAGAATGTACTTAACTTAATTGAAGTTTATTAC  346

seq1  TTAAAAACACAAGCTGGATGTGGCAACATTCAGTTACTTGTATTTAAATG  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAACACAAGCTGGATGTGGCAACATTCAGTTACTTGTATTTAAATG  396

seq1  TAAAATACCTCACAATTGCTATGTTACATTAAAGTACAGTGAGTTGATGA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATACCTCACAATTGCTATGTTACATTAAAGTACAGTGAGTTGATGA  446

seq1  AAATTTAGGTTAAAAAATTTGACTCTTGTGAAAGCTACCATCATGTCAAG  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTAGGTTAAAAAATTTGACTCTTGTGAAAGCTACCATCATGTCAAG  496

seq1  TATTTGTAAGGTCTCAAAAACCACTGTGAAATTTACTTTTTTTTTTCTTT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGTAAGGTCTCAAAAACCACTGTGAAATTTACTTTTTTTTTTCTTT  546

seq1  TCTTAAAATGCCAGTTATGCTGACAAACTTTATTGCTTCACCAAACTTTA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAAAATGCCAGTTATGCTGACAAACTTTATTGCTTCACCAAACTTTA  596

seq1  TAGTAGAAAAATGTGACTTTGTTTTTAATAAATTACCATTTTTGCATATA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAGAAAAATGTGACTTTGTTTTTAATAAATTACCATTTTTGCATATA  646

seq1  TCACTCAAAACACGAGGCCTAAATACTAACAAAATGCATTATTAATTTAA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCAAAACACGAGGCCTAAATACTAACAAAATGCATTATTAATTTAA  696

seq1  TTGTCACAGCTTATTTAACTAGCTTCTATTATATATTTTTCTGCAATATG  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCACAGCTTATTTAACTAGCTTCTATTATATATTTTTCTGCAATATG  746

seq1  CAAGGCATTAGAGAGTAGAATCAAATCCTGAACATGAAAAATAAACCAAT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCATTAGAGAGTAGAATCAAATCCTGAACATGAAAAATAAACCAAT  796

seq1  TATACTGTCCTGGAAAAATTAAAATATAGCAAGCTTGCGAAATTATAGGT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTGTCCTGGAAAAATTAAAATATAGCAAGCTTGCGAAATTATAGGT  846

seq1  AAGGAAAAGCTTTAATGGAATTGATGAACGTTGTTCCCAAAGAAAAGGTA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAAAGCTTTAATGGAATTGATGAACGTTGTTCCCAAAGAAAAGGTA  896

seq1  AATCAAACCACGGCTTCTGTGATGCTTATAAAGCCACACACACAAAGGGG  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAAACCACGGCTTCTGTGATGCTTATAAAGCCACACACACAAAGGGG  946

seq1  AGGAGCCTTTATAAATGTAAAATAGATTACAATGATAAATCCTCGTCTCC  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGCCTTTATAAATGTAAAATAGATTACAATGATAAATCCTCGTCTCC  996

seq1  TCCAACCAGAGATGGACAACAAAAAAATGCATTTATAGCTAACTCCAGGA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACCAGAGATGGACAACAAAAAAATGCATTTATAGCTAACTCCAGGA  1046

seq1  ATTC  1047
      ||||
seq2  ATTC  1050