BAC Information

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BAC

Clone NameB6Ng01-181E04
Chromosome18 (Build37)
Map Location 59,315,972 - 59,439,611
singlet/doubletdoublet
Overlap gene4833446K15Rik
Upstream geneFbn2, Slc27a6, Isoc1, Adamts19, A730017C20Rik
Downstream geneLOC667549, EG240327, LOC546714, EG225594
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-181E04.bB6Ng01-181E04.g
ACCGA007470GA007471
length1,0021,207
definitionB6Ng01-181E04.b B6Ng01-181E04.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(59,438,661 - 59,439,611)(59,315,972 - 59,317,182)
sequence
gaattcactactccctaaataattactaagcacatcgtcttcctcaaata
aagtgcacggattcttttcccatagatgattttacaattctctcagttaa
tttaataatattcagaattctctggattattgaatgtgtcaatctacgca
catctctaccttgttcaagtcttgtttctgtggtggattctcttctttta
cacaagaccagtttctaaagtcttctcaggattctaccttgtgcttcttt
ttctctctaaacttttgctgttacaagatggtatcttaaccttataccac
aaaatccactttttacgttatgctatttattatgcaaaagcatgctgaag
agtttttgatacacatacatgcatgcacacatacacagacaaatatgtac
aagcacagaaaagcacatgaatataaaatgtttgtcactgtatttgatct
aaaaaccatcttccttctccctttcaaagcaaaagcccttaacttttttc
ctcctctgattcacagttcagcatacaccaatctgatgtctctgaaacaa
acttgtgaaacttgtcattaagatcatcttcaatccctgctgccaaattc
aatgagttttgtacttcatttcttctacgtctgatgcagctgacctatac
tcttccatgaccctttccttgtcagtgacattcactttgatggtttctat
attacttccttgctgattcgtgagtttcacttttctgttctttctctttg
acctccaaataataaaatttcttgacaattaatcttggctggttcacgtt
ctcttaatggacaatgtcttcttagggtcaatttactgttgggcctttaa
atgtcatctacatttgctctaagaatgacagcttttcagcacaagtcttt
ccagttgtaaatgttctgtttcctgattcagttcagcagtgtgcctgaca
ttttcataaaggatgcctgacctgcttgtcacctcactgtggccatatct
aa

gaattctggaggctaagaaacacgtaatgtgggggggtgtaaccttgaat
tcttgtcttgactcaactctccgcttgcttacaattttgagaagatgaat
aagtgtaatttaagaaataaaaagcaaaaatacaaaaatacatagcttct
tccattctcctcagactcttagttttatgtgttatgtgcattcgaatata
gttacagggttttggttaggttagaaaaataggctgcttttggtaggaac
agaatctgtctagccttgacttttaaactctctcgagcattaaaattaaa
ggtgagagagcaaaattgcaccccttgtacagatggtctgaaaaggtaaa
tttacagtaagcttttcctttcttagttttccttctcctttttcattaag
taatttattcattcacttttcatcttgatcgcagcaccccctttgcccag
tcccactctcacaatctccctaccccattactccattcccctctcctcat
aaactggaagcccacccccatgggtaccaacttaacctggcacatgaagt
cacggcaggattgcgctcatctgctcccactgctgtaagtttttctttac
agaagtgtttcaggtaatagaggaagaacacttacaatatgtccacttgc
agtttttaataagacaatcagtagattagtcaaggaatctagtatccatt
ggtgacaccagttaaggacagacatgcactactcccctactcctaagaga
acacagtacaacttatcaagtaaattatacctataagagaaaaatatgaa
cctggacttgccgttttctagagtctactgttaatttaccacttcagagg
gcacagtgagtgtctagagaactgtggtaagtgagagcacatcgaggagg
tctgtatgttctgttgtgggaatctcaagaaggaaaaaggcacagtttcc
cttctttttctttttttagaacaaaacatagtttctttaaaacaacagat
gcagacaggaatccagtacaaatgttgaagagcctcagacgaaaaataac
tgattctatgggctgatgagtagagtggatattatggacatcattagatc
agctaggatgggactagagaacaagctaagaaccttagtgaaagtgttga
gcctgatccggaagaggtaaaaggttccttggtaaaaagagatatttttc
aaatagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_59438661_59439611
seq2: B6Ng01-181E04.b_44_994 (reverse)

seq1  ATGTCAGGCACACTGCTGAACTGAATCAGGAAACAGAACATTTACAACTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCAGGCACACTGCTGAACTGAATCAGGAAACAGAACATTTACAACTG  50

seq1  GAAAGACTTGTGCTGAAAAGCTGTCATTCTTAGAGCAAATGTAGATGACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGACTTGTGCTGAAAAGCTGTCATTCTTAGAGCAAATGTAGATGACA  100

seq1  TTTAAAGGCCCAACAGTAAATTGACCCTAAGAAGACATTGTCCATTAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAGGCCCAACAGTAAATTGACCCTAAGAAGACATTGTCCATTAAGA  150

seq1  GAACCTGAACCAGCCAAGATTAATTGTCAAGAAATTTTATTATTTGGAGG  200
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACGTGAACCAGCCAAGATTAATTGTCAAGAAATTTTATTATTTGGAGG  200

seq1  TCAAAGAGAAAGAACAGAAAAGTGAAACTCACGAATCAGCAAGGAAGTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGAGAAAGAACAGAAAAGTGAAACTCACGAATCAGCAAGGAAGTAA  250

seq1  TATAGAAACCATCAAAGTGAATGTCACTGACAAGGAAAGGGTCATGGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGAAACCATCAAAGTGAATGTCACTGACAAGGAAAGGGTCATGGAAG  300

seq1  AGTATAGGTCAGCTGCATCAGACGTAGAAGAAATGAAGTAGAAAACTCAT  350
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AGTATAGGTCAGCTGCATCAGACGTAGAAGAAATGAAGTACAAAACTCAT  350

seq1  TGAATTTGGCAGCAGGGATTGAAGATGATCTTAATGACAAGTTTCACAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTTGGCAGCAGGGATTGAAGATGATCTTAATGACAAGTTTCACAAG  400

seq1  TTTGTTTCAGAGACATCAGATTGGTGTATGCTGAACTGTGAATCAGAGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTCAGAGACATCAGATTGGTGTATGCTGAACTGTGAATCAGAGGA  450

seq1  GGAAAAAAGTTAAGGGCTTTTGCTTTGAAAGGGAGAAGGAAGATGGTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAAAGTTAAGGGCTTTTGCTTTGAAAGGGAGAAGGAAGATGGTTTT  500

seq1  TAGATCAAATACAGTGACAAACATTTTATATTCATGTGCTTTTCTGTGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATCAAATACAGTGACAAACATTTTATATTCATGTGCTTTTCTGTGCT  550

seq1  TGTACATATTTGTCTGTGTATGTGTGCATGCATGTATGTGTATCAAAAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACATATTTGTCTGTGTATGTGTGCATGCATGTATGTGTATCAAAAAC  600

seq1  TCTTCAGCATGCTTTTGCATAATAAATAGCATAACGTAAAAAGTGGATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAGCATGCTTTTGCATAATAAATAGCATAACGTAAAAAGTGGATTT  650

seq1  TGTGGTATAAGGTTAAGATACCATCTTGTAACAGCAAAAGTTTAGAGAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTATAAGGTTAAGATACCATCTTGTAACAGCAAAAGTTTAGAGAGA  700

seq1  AAAAGAAGCACAAGGTAGAATCCTGAGAAGACTTTAGAAACTGGTCTTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAGCACAAGGTAGAATCCTGAGAAGACTTTAGAAACTGGTCTTGT  750

seq1  GTAAAAGAAGAGAATCCACCACAGAAACAAGACTTGAACAAGGTAGAGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAAGAAGAGAATCCACCACAGAAACAAGACTTGAACAAGGTAGAGAT  800

seq1  GTGCGTAGATTGACACATTCAATAATCCAGAGAATTCTGAATATTATTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCGTAGATTGACACATTCAATAATCCAGAGAATTCTGAATATTATTAA  850

seq1  ATTAACTGAGAGAATTGTAAAATCATCTATGGGAAAAGAATCCGTGCACT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAACTGAGAGAATTGTAAAATCATCTATGGGAAAAGAATCCGTGCACT  900

seq1  TTATTTGAGGAAGACGATGTGCTTAGTAATTATTTAGGGAGTAGTGAATT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTGAGGAAGACGATGTGCTTAGTAATTATTTAGGGAGTAGTGAATT  950

seq1  C  951
      |
seq2  C  951


seq1: chr18_59315972_59317182
seq2: B6Ng01-181E04.g_64_1270

seq1  GAATTCTGGAGGCTAAGAAACACGTAATGTGGGGGGGTGTAACCTTGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGAGGCTAAGAAACACGTAATGTGGGGGGGTGTAACCTTGAAT  50

seq1  TCTTGTCTTGACTCAACTCTCCGCTTGCTTACAATTTTGAGAAGATGAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTCTTGACTCAACTCTCCGCTTGCTTACAATTTTGAGAAGATGAAT  100

seq1  AAGTGTAATTTAAGAAATAAAAAGCAAAAATACAAAAATACATAGCTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTAATTTAAGAAATAAAAAGCAAAAATACAAAAATACATAGCTTCT  150

seq1  TCCATTCTCCTCAGACTCTTAGTTTTATGTGTTATGTGCATTCGAATATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTCTCCTCAGACTCTTAGTTTTATGTGTTATGTGCATTCGAATATA  200

seq1  GTTACAGGGTTTTGGTTAGGTTAGAAAAATAGGCTGCTTTTGGTAGGAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACAGGGTTTTGGTTAGGTTAGAAAAATAGGCTGCTTTTGGTAGGAAC  250

seq1  AGAATCTGTCTAGCCTTGACTTTTAAACTCTCTCGAGCATTAAAATTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCTGTCTAGCCTTGACTTTTAAACTCTCTCGAGCATTAAAATTAAA  300

seq1  GGTGAGAGAGCAAAATTGCACCCCTTGTACAGATGGTCTGAAAAGGTAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAGAGAGCAAAATTGCACCCCTTGTACAGATGGTCTGAAAAGGTAAA  350

seq1  TTTACAGTAAGCTTTTCCTTTCTTAGTTTTCCTTCTCCTTTTTCATTAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAGTAAGCTTTTCCTTTCTTAGTTTTCCTTCTCCTTTTTCATTAAG  400

seq1  TAATTTATTCATTCACTTTTCATCTTGATCGCAGCACCCCCTTTGCCCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTATTCATTCACTTTTCATCTTGATCGCAGCACCCCCTTTGCCCAG  450

seq1  TCCCACTCTCACAATCTCCCTACCCCATTACTCCATTCCCCTCTCCTCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACTCTCACAATCTCCCTACCCCATTACTCCATTCCCCTCTCCTCAT  500

seq1  AAACTGGAAGCCCACCCCCATGGGTACCAACTTAACCTGGCACATGAAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGGAAGCCCACCCCCATGGGTACCAACTTAACCTGGCACATGAAGT  550

seq1  CACGGCAGGATTGCGCTCATCTGCTCCCACTGCTGTAAGTTTTTCTTTAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGGCAGGATTGCGCTCATCTGCTCCCACTGCTGTAAGTTTTTCTTTAC  600

seq1  AGAAGTGTTTCAGGTAATAGAGGAAGAACACTTACAATATGTCCACTTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTGTTTCAGGTAATAGAGGAAGAACACTTACAATATGTCCACTTGC  650

seq1  AGTTTTTAATAAGACAATCAGTAGATTAGTCAAGGAATCTAGTATCCATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTTAATAAGACAATCAGTAGATTAGTCAAGGAATCTAGTATCCATT  700

seq1  GGTGACACCAGTTAAGGACAGACATGCACTACTCCCCTACTCCTAAGAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGACACCAGTTAAGGACAGACATGCACTACTCCCCTACTCCTAAGAGA  750

seq1  ACACAGTACAACTTATCAAGTAAATTATACCTATAAGAGAAAAATATGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGTACAACTTATCAAGTAAATTATACCTATAAGAGAAAAATATGAA  800

seq1  CCTGGACTTGCCGTTTTCTAGAGTCTACTGTTAATTTACCACTTCAGAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGACTTGCCGTTTTCTAGAGTCTACTGTTAATTTACCACTTCAGAGG  850

seq1  GCACAGTGAGTGTCTAGAGAACTGTGGTAAGTGAGAGCACATCGAGGAGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGTGAGTGTCTAGAGAACTGTGGTAAGTGAGAGCACATCGAGGAGG  900

seq1  TCTGTATGTTCTGTTGTGGGAATCTC-AGAAGGAAAAAGGCACAGTTTCC  949
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TCTGTATGTTCTGTTGTGGGAATCTCAAGAAGGAAAAAGGCACAGTTTCC  950

seq1  C-TCTTTT--CTTTTTTAG-ACAAAACATAGTTTCTTTAAAACAACAGAT  995
      | ||||||   |||||||| ||||||||||||||||||||||||||||||
seq2  CTTCTTTTTCTTTTTTTAGAACAAAACATAGTTTCTTTAAAACAACAGAT  1000

seq1  GCAGACA-GAATCCAGTACAAATGTTGAAGAGCCTCAGACGACAA--TAC  1042
      ||||||| |||||||||||||||||||||||||||||||||| ||   ||
seq2  GCAGACAGGAATCCAGTACAAATGTTGAAGAGCCTCAGACGAAAAATAAC  1050

seq1  TGATTCTATGGGCTTGATGGAGTAGAAGTTGGATATTATGGAACCATCAT  1092
      ||||||||||||| |||| |||||||   |||||||||||||  ||||||
seq2  TGATTCTATGGGC-TGAT-GAGTAGA--GTGGATATTATGGA--CATCAT  1094

seq1  TAGATCCAGCTAGGGATGGACTAGGAGACAAAGCTAAGATACCTAAGGTA  1142
      ||||| ||||||||   |||||| ||||  ||||||||| |||| | || 
seq2  TAGAT-CAGCTAGGATGGGACTA-GAGAACAAGCTAAGA-ACCTTA-GTG  1140

seq1  GAAGTGTTGAAGCTGGATATCCAGAAGAGGGAAAAAAGTGTTCCTTTGTA  1192
       |||||||||  |||   |||| ||||||| ||||    ||||||| |||
seq2  AAAGTGTTGAGCCTG---ATCCGGAAGAGGTAAAA---GGTTCCTTGGTA  1184

seq1  AAAAG----ATTTTTCAAATAGC  1211
      |||||    ||||||||||||||
seq2  AAAAGAGATATTTTTCAAATAGC  1207


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