MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-181P01
Chromosome	18 (Build37)
Map Location	77,008,524 - 77,189,041
singlet/doublet	doublet
Overlap gene	EG664805, LOC620139, Ier3ip1, Hdhd2
Upstream gene	Zbtb7c, 4833419G08Rik, LOC668184, Smad2, LOC668188, EG639576
Downstream gene	Katnal2, Pias2, EG639653, St8sia5, Loxhd1, Rnf165, 8030462N17Rik, 4930465K10Rik, Ccdc5, Atp5a1, Pstpip2, 5430411K18Rik
Link	Open Mouse BAC browser

Click to get alignment info.

name	Zbtb7c (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:207259 MGI:2443302
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4833419G08Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74842 MGI:1922092
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	LOC668184 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668184
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 5 Proteins pseudo : _no_value

name	Smad2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17126 MGI:108051
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668188 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668188
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	EG639576 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:639576 MGI:3644751
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 7 Proteins

name	EG664805 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:664805 MGI:3645984
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 5 Proteins

name	LOC620139 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:620139
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 24 Proteins

name	Ier3ip1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66191 MGI:1913441
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hdhd2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76987 MGI:1924237
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	Katnal2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71206 MGI:1924234
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pias2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17344 MGI:1096566
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG639653 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:639653 MGI:3646549
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	St8sia5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:225742 MGI:109243
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Loxhd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:240411 MGI:1914609
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 3 ESTs, 1 Protein

name	Rnf165 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:225743 MGI:2444521
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 83 ESTs, 1 Protein

name	8030462N17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:212163 MGI:2444951
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930465K10Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67640 MGI:1914890
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 6 ESTs, 1 Protein

name	Ccdc5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:225745 MGI:2385076
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Atp5a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11946 MGI:88115
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pstpip2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19201 MGI:1335088
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	5430411K18Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71423 MGI:1918673
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 94 ESTs, 3 Proteins

name	Zbtb7c (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:47271528 GeneID:207259 MGI:2443302
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger and BTB domain containing 7C transcript_id : NM_145356.3

name	4833419G08Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94404523 GeneID:74842 MGI:1922092
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4833419G08 gene transcript_id : XM_994760.1

name	Smad2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142368334 GeneID:17126 MGI:108051
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MAD homolog 2 (Drosophila) transcript_id : NM_010754.3

name	EG639576 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149270187 GeneID:639576 MGI:3644751
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 7 Proteins product : predicted gene, EG639576 transcript_id : XM_916065.3

name	EG664805 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149270189 GeneID:664805 MGI:3645984
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 5 Proteins product : predicted gene, EG664805 transcript_id : XM_972803.2

name	LOC620139 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270191 GeneID:620139
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 24 Proteins product : similar to retinitis pigmentosa GTPase regulator interacting protein 1 transcript_id : XM_001472129.1

name	Ier3ip1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142365900 GeneID:66191 MGI:1913441
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : immediate early response 3 interacting protein 1 transcript_id : NM_025409.2

name	Hdhd2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85861227 GeneID:76987 MGI:1924237
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : haloacid dehalogenase-like hydrolase domain containing 2 transcript_id : NM_029826.2

name	Hdhd2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85861234 GeneID:76987 MGI:1924237
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : haloacid dehalogenase-like hydrolase domain containing 2 transcript_id : NM_001039202.1

name	Hdhd2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85861230 GeneID:76987 MGI:1924237
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : haloacid dehalogenase-like hydrolase domain containing 2 transcript_id : NM_001039201.1

name	Katnal2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142349930 GeneID:71206 MGI:1924234
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : katanin p60 subunit A-like 2 transcript_id : NM_027721.2

name	Pias2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142382362 GeneID:17344 MGI:1096566
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein inhibitor of activated STAT 2 transcript_id : NM_008602.3

name	EG639653 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142383481 GeneID:639653 MGI:3646549
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG639653 transcript_id : NM_001039252.2

name	St8sia5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:24233503 GeneID:225742 MGI:109243
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 transcript_id : NM_153124.1

name	Loxhd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149270193 GeneID:240411 MGI:1914609
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 3 ESTs, 1 Protein product : lipoxygenase homology domains 1 transcript_id : XM_001472179.1

name	Rnf165 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149270195 GeneID:225743 MGI:2444521
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 83 ESTs, 1 Protein product : ring finger protein 165 transcript_id : XM_129042.8

name	8030462N17Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:87196344 GeneID:212163 MGI:2444951
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 8030462N17 gene transcript_id : NM_178670.3

name	Ccdc5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130237 GeneID:225745 MGI:2385076
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coiled-coil domain containing 5 transcript_id : NM_146089.2

name	Atp5a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126506325 GeneID:11946 MGI:88115
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit, isoform 1 transcript_id : NM_007505.2

name	Pstpip2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126506309 GeneID:19201 MGI:1335088
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : proline-serine-threonine phosphatase-interacting protein 2 transcript_id : NM_013831.4

name	5430411K18Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149270198 GeneID:71423 MGI:1918673
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 94 ESTs, 3 Proteins product : RIKEN cDNA 5430411K18 gene transcript_id : XM_973419.2

name	4833419G08Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94404524 GeneID:74842 MGI:1922092
definition	codon_start : 1 product : hypothetical protein LOC74842 protein_id : XP_999854.1

name	Zbtb7c (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21703718 CCDS:CCDS29349.1 GeneID:207259 MGI:2443302
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA] codon_start : 1 product : zinc finger and BTB domain containing 36 protein_id : NP_663331.1

name	Smad2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560568 CCDS:CCDS29350.1 GeneID:17126 MGI:108051
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA]; GO:0005667 - transcription factor complex [Evidence IDA] GO_function : GO:0003690 - double-stranded DNA binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0008134 - transcription factor binding [Evidence IPI]; GO:0016563 - transcriptional activator activity [Evidence IDA] GO_process : GO:0009952 - anterior/posterior pattern formation [Evidence IMP]; GO:0045165 - cell fate commitment [Evidence IMP]; GO:0007182 - common-partner SMAD protein phosphorylation [Evidence IEA]; GO:0007242 - intracellular signaling cascade [Evidence IDA]; GO:0001707 - mesoderm formation [Evidence IMP]; GO:0048340 - paraxial mesoderm morphogenesis [Evidence IMP]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0045893 - positive regulation of transcription, DNA-dependent [Evidence IDA]; GO:0051098 - regulation of binding [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0007183 - SMAD protein heteromerization [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0007179 - transforming growth factor beta receptor signaling pathway [Evidence IDA] codon_start : 1 note : Smad 2 product : MAD homolog 2 protein_id : NP_034884.2

name	EG639576 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149270188 GeneID:639576 MGI:3644751
definition	codon_start : 1 product : hypothetical protein protein_id : XP_921158.3

name	EG664805 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149270190 GeneID:664805 MGI:3645984
definition	codon_start : 1 product : similar to functional smad suppressing element 18 protein_id : XP_977897.2

name	LOC620139 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270192 GeneID:620139
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472179.1

name	Ier3ip1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13384796 GeneID:66191 MGI:1913441
definition	codon_start : 1 product : immediate early response 3 interacting protein 1 protein_id : NP_079685.1

name	Hdhd2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85861231 GeneID:76987 MGI:1924237
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA] GO_process : GO:0008152 - metabolism [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 2 product : haloacid dehalogenase-like hydrolase domain containing 2 isoform 1 protein_id : NP_001034290.1

name	Hdhd2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313310 GeneID:76987 MGI:1924237
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA] GO_process : GO:0008152 - metabolism [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : haloacid dehalogenase-like hydrolase domain containing 2 isoform 1 protein_id : NP_084102.1

name	Hdhd2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85861235 GeneID:76987 MGI:1924237
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA] GO_process : GO:0008152 - metabolism [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 3 product : haloacid dehalogenase-like hydrolase domain containing 2 isoform 2 protein_id : NP_001034291.1

name	Katnal2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313044 GeneID:71206 MGI:1924234
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] codon_start : 1 product : katanin p60 subunit A-like 2 protein_id : NP_081997.1

name	Pias2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27532974 GeneID:17344 MGI:1096566
definition	GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003702 - RNA polymerase II transcription factor activity [Evidence IDA]; GO:0019789 - SUMO ligase activity [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0016925 - protein sumoylation [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0006351 - transcription, DNA-dependent [Evidence IDA]; GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 exception : mismatches in translation note : PIASxalpha6 product : Msx-interacting-zinc finger protein_id : NP_032628.2

name	EG639653 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85986673 GeneID:639653 MGI:3646549
definition	codon_start : 1 product : hypothetical protein LOC639653 protein_id : NP_001034341.1

name	St8sia5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:24233504 CCDS:CCDS29353.1 GeneID:225742 MGI:109243
definition	GO_component : GO:0030173 - integral to Golgi membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003828 - alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity [Evidence IDA]; GO:0008373 - sialyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA] GO_process : GO:0006486 - protein amino acid glycosylation [Evidence IEA] codon_start : 1 exception : mismatches in translation note : isoform middle is encoded by transcript variant 2; sialyltransferase 8 (alpha-2, 8-sialyltransferase) E product : sialyltransferase 8E isoform middle protein_id : NP_694764.1

name	Loxhd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149270194 GeneID:240411 MGI:1914609
definition	codon_start : 1 product : lipoxygenase homology domains 1 protein_id : XP_001472229.1

name	Rnf165 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149270196 GeneID:225743 MGI:2444521
definition	codon_start : 1 product : ring finger protein 165 protein_id : XP_129042.7

name	8030462N17Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:87196345 CCDS:CCDS29355.1 GeneID:212163 MGI:2444951
definition	codon_start : 1 product : hypothetical protein LOC212163 protein_id : NP_848785.2

name	Ccdc5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22122593 CCDS:CCDS29357.1 GeneID:225745 MGI:2385076
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005874 - microtubule [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0007067 - mitosis [Evidence IEA] codon_start : 1 note : spindle associated product : coiled-coil domain containing 5 protein_id : NP_666201.1

name	Atp5a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680748 CCDS:CCDS29358.1 GeneID:11946 MGI:88115
definition	GO_component : GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IDA]; GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]; GO:0016469 - proton-transporting two-sector ATPase complex [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0015078 - hydrogen ion transporter activity [Evidence IEA]; GO:0046933 - hydrogen-transporting ATP synthase activity, rotational mechanism [Evidence IEA]; GO:0046961 - hydrogen-transporting ATPase activity, rotational mechanism [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0016820 - hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0006754 - ATP biosynthesis [Evidence IEA]; GO:0015986 - ATP synthesis coupled proton transport [Evidence IEA]; GO:0006811 - ion transport [Evidence IEA]; GO:0015992 - proton transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit, isoform 1 protein_id : NP_031531.1

name	Pstpip2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:86355499 GeneID:19201 MGI:1335088
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IDA]; GO:0005829 - cytosol [Evidence IDA]; GO:0005624 - membrane fraction [Evidence IDA] GO_function : GO:0003779 - actin binding [Evidence NAS] GO_process : GO:0007010 - cytoskeleton organization and biogenesis [Evidence NAS] codon_start : 1 product : proline-serine-threonine phosphatase-interacting protein 2 protein_id : NP_038859.3

name	5430411K18Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149270199 GeneID:71423 MGI:1918673
definition	codon_start : 1 product : hypothetical protein LOC71423 protein_id : XP_978513.2

name	LOC668188 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668188
definition	number : 1 pseudo : _no_value

name	LOC668188 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668188
definition	number : 2 pseudo : _no_value

name	LOC668188 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668188
definition	number : 3 pseudo : _no_value

name	LOC668188 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668188
definition	number : 4 pseudo : _no_value

name	LOC668184 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149269869 GeneID:668184
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 5 Proteins product : similar to ribosomal protein L38 pseudo : _no_value transcript_id : XR_034710.1

name	4930465K10Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:94405062 GeneID:67640 MGI:1914890
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 6 ESTs, 1 Protein product : RIKEN cDNA 4930465K10 gene transcript_id : XR_002327.1

clone name	MSMg01-166K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-391K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-260I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-534J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-119A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-082G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-081P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497P01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-541E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-213J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-064K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-137H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447I03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-067N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-182J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-462M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-342N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-295L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-288P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-129K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-308G12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-531L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-325F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-342A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-187N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-313C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-348E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-139K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-357K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-075L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-079J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-413D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-234K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-169E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-211K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-235C12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-456C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317P11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-524O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-447K02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-298P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-290J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-523O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-456H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-164C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182A06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056A15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-219J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187L17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134G01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307P14
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-181P01.b	B6Ng01-181P01.g
ACC	GA007967	GA007968
length	1,106	429
definition	B6Ng01-181P01.b	B6Ng01-181P01.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(77,187,941 - 77,189,041)	(77,008,524 - 77,008,954)
sequence	gaattcacagtcctcctgcctcctaagagctggggttagagccctatgct acctcgttaatctttattctgagctgtatcacacaaggatacatttggtt tagagatcattagtaacggggtcttaagaagaggaatgagatttgatgta gtcgggacttagggtttgttttgttttgagacaggatctcactatgtagc cctacctgacccggaaccgctctgtagaccaggttttcctctagtattac aaccatccctgcttctgtatcccattgtctgcatcagaggcatctgccac catgcctggtgatttatacgttctttttaggcttggggattactttatta gtcacttttcccatttgtttcttatctttacaagctgtcttactacaaca tgacccttggcgaggaaaggattactcagctcacacttccacagcactgt ccatcagggaaggaagtcagggtagacactcgacagggtaggagcctgat gcaggggccatggaggggctctgtgttctggggaaccaccactgtttgac cccaggctaccacatgggacactgtgtcataggcctcccacaaggctggg agatgggcaacaccgaatctaaactccatcttcagtcactacaaaatttt tccaaaacacctttgttctatggcttggcttcaataaatggctaacagag agcattcttaatgttaatattctctatgatcttaaaatttctgctgatat atgggcaaacgtccaggtttggttggtaactgcacccttgtgcctcctct gtagccaatattctaaggctcaggttctactttgaaagtatggtcagtgc agcagaccccgtgcctccagggactcagaccccaaaccgaagtcccctcc ctttgttcgagcacgccccccccaccctcttcttcctttgacaaactcac agttttagctgcagtgatcacctccaaaccagggctgctaatcttatcct cctagtattgtggaatcacttgtcttgtgaattcgatcctaattccagag ccctgattcttctgcttgctatgtcctttcacgttgccctgacctctggc aacacc	accttactccagcacctaaggccttcccatgagtcctccactaccttacc cttctgcaacatgagccagtcaggaaacaggctctgagagagagaaatac tcatggcttgctctggcggtctctcaggagtaccaagctgtaggactgtg gcaagattacttccctcatctagaaaactaaaactgcagctgtggttaga aaattatttggagggccagtgatatggctcagtcggtaagggtgcctgct cccaagcctgctacctgagttctactttgagaatccacacaggacaaagt cctctgacctccacatgcctgtgtcccacacataaatatagagagactca aaaaggaaataaatacaaagatagatagatagatagatagatagatagat agatagatagatagatagataggaatttt
quality values	Open. Hide. 58 39 29 39 58 34 24 43 31 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 38 33 33 34 38 38 50 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 59 62 62 62 62 62 62 62 54 62 62 54 62 59 62 62 62 59 62 62 62 62 62 62 62 42 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 54 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 54 62 62 62 62 54 62 62 62 62 62 62 62 54 56 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 39 62 49 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 52 62 58 58 58 51 58 54 54 58 58 58 58 58 58 54 52 58 54 58 58 41 58 58 54 54 58 58 54 58 54 58 54 54 58 58 52 54 54 58 58 58 54 58 58 58 58 58 35 42 26 58 58 58 54 58 58 52 54 54 58 58 58 58 54 58 54 39 58 58 58 58 49 45 50 58 53 53 58 47 38 50 54 53 53 53 51 51 49 32 58 58 47 34 58 58 58 43 48 30 19 47 49 58 53 46 49 51 42 58 58 54 58 47 41 47 49 50 46 49 50 58 52 58 49 50 51 58 46 32 51 51 58 49 39 50 58 54 37 49 41 58 37 52 52 51 29 58 31 46 40 29 46 50 37 49 37 58 39 51 26 50 35 58 50 50 37 58 58 58 53 41 41 50 53 53 39 41 42 52 39 58 58 31 52 58 44 53 53 47 35 50 49 38 38 53 53 42 51 51 54 54 40 46 54 46 45 52 52 53 53 39 37 25 21 54 15 54 49 27 46 54 38 31 53 33 22 26 37 39 28 49 54 33 26 23 31 29 47 35 37 33 25 39 28 31 30 53 26 33 23 52 36 33 34 40 45 33 52 52 31 24 37 22 28 12 31 31 11 22 32 32 41 32 40 35 32 19 49 41 29 45 53 52 29 40 28 26 42 47 18 34 31 30 34 37 31 32 34 31 30 12 27 12 27 20 29 28 18 43 31 29 11 15 33 33 7 40 25 21 11 15 11 21 14 31 13 43 36 24 16 32 26 18 29 17 41 35 18 31 30 30 29 16 10 14 42 31 27 43 8 9 15 31 31 15 31 24 25 9 20 13 15 23 18 25 17 23 32 30 19 25 37 30 21 24 25 36 30 46 9 8 24 30 48 32 32 21 14 18 30 10 10 33 19 18 15 17 23 31 38 41 6 8 26 23 32 30 27 19 14 6 31 26 26 25 16 13 8 13 26 25 25 38 29 6 19 7 5 24 12 10 19 34 31 16 11 17 18 21 11 7 6 8 21 16 32 19 18 48 8 4 5 7 5 7 14 6 17 7 13 20 31 32 24 32 18 14 31 15 21 13 14 27 10 7 16 10 10 22 24 11 30 28 7 21 7 20 24 15 15 9 9 6 9 13 5 10 28 13 14 21 29 22 9 6 15 15 19 10 16 38 7 10 8 14 5 10 16 16 13 14 27 10 40 15 7 9 5 23 6 10 3 4 21 21 6 8 22 7 5 8 6 20 4 13 9 24 8 11 5 18 17	Open. Hide. 34 59 24 18 13 23 18 24 50 32 10 13 17 18 23 28 33 43 43 46 62 43 62 50 59 50 50 46 23 46 54 36 36 59 59 59 62 62 59 59 59 59 59 59 56 48 48 36 46 48 38 35 54 62 43 46 43 27 34 43 38 34 46 62 50 59 46 36 50 50 56 49 49 59 59 51 51 51 49 59 51 31 36 40 56 49 54 27 46 31 36 38 62 46 46 35 34 56 51 49 62 62 62 59 62 62 43 56 56 56 36 56 56 56 59 59 51 51 59 49 59 59 59 43 48 50 46 54 33 36 46 28 28 43 34 34 56 48 54 54 46 59 51 62 59 59 62 62 54 54 54 40 49 49 51 59 46 44 50 54 48 59 56 34 34 28 30 27 34 34 36 56 51 59 59 59 59 43 46 50 50 43 36 34 34 34 40 46 39 46 51 49 43 46 40 37 49 59 51 50 46 50 50 50 50 50 50 50 56 59 46 46 46 56 56 36 50 45 28 36 46 46 27 23 34 27 34 24 59 59 46 33 34 49 43 44 43 51 51 49 62 48 50 56 35 48 38 51 43 34 43 37 48 38 46 43 49 50 49 54 48 46 30 30 34 34 37 25 19 18 14 23 23 46 46 13 18 11 18 18 48 62 56 56 49 49 30 46 50 38 37 43 59 59 49 39 21 27 18 16 24 24 59 59 50 46 54 59 56 46 50 40 36 36 34 59 59 51 56 56 54 46 54 56 50 46 49 56 51 56 56 38 56 40 56 56 50 46 51 49 39 46 46 59 51 59 50 50 50 36 43 50 51 51 43 59 59 56 56 49 39 39 39 43 18 30 18 18 23 18 59 43 36 13 30 17 28 18 30 56 62 59 59 62 56 48 46 44 44 49 49 41 32 34 50 13 18 13 12 8 13 38 59 49 51 18 27 19 12 17 21 49 51 34 39 32 35 23 29 34 49 11 18 12 11 13 13 10 7

Alignment Information

BAC End 1

BAC End 2

seq1: chr18_77187941_77189041
seq2: B6Ng01-181P01.b_47_1152 (reverse)

seq1  GGTGTTGCAAGA-GTCAGGGCCACGTG-AAGGACATAGCAGGCAGAAGAA  48
      |||||||| ||| |||||||| ||||| |||||||||||| |||||||||
seq2  GGTGTTGCCAGAGGTCAGGGCAACGTGAAAGGACATAGCAAGCAGAAGAA  50

seq1  TCA-GGCTCTGGAATTTAGAATCGAATTCAC-AGACAAGTGATTCCCACA  96
      ||| |||||||||| |||| ||||||||||| ||||||||||||||   |
seq2  TCAGGGCTCTGGAA-TTAGGATCGAATTCACAAGACAAGTGATTCCACAA  99

seq1  TACCTAAGGAGGAT-AGATTAGCAG-CCTGGTTTGGA-GTGATCACTGCA  143
      |||   |||||||| |||||||||| ||||||||||| ||||||||||||
seq2  TAC--TAGGAGGATAAGATTAGCAGCCCTGGTTTGGAGGTGATCACTGCA  147

seq1  GCTAAAACTGTGAGTTTGTCAAAGGAAGAAGAGGGTGGGGGGGGCGGTGC  193
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GCTAAAACTGTGAGTTTGTCAAAGGAAGAAGAGGGTGGGGGGGGC-GTGC  196

seq1  TCGAAC-AAGGGAGGGGACTTCGGTTTGGGGTCTGAGTCCTTGGAGGCAC  242
      |||||| ||||||||||||||||||||||||||||||||| |||||||||
seq2  TCGAACAAAGGGAGGGGACTTCGGTTTGGGGTCTGAGTCCCTGGAGGCAC  246

seq1  GGGGTCTGCTGCACTGACCATACTTTCAAAGTAGAACCTGAGCCTTAGAA  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTCTGCTGCACTGACCATACTTTCAAAGTAGAACCTGAGCCTTAGAA  296

seq1  TATTGGCTACAGAGGAGGCACAAGGGTGCAGTTACCAACC-AACCTGGAC  341
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TATTGGCTACAGAGGAGGCACAAGGGTGCAGTTACCAACCAAACCTGGAC  346

seq1  GTTTGCCCATATATCAGCAGAAATTTTAAGATCATAGAGAATATTAACAT  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCCCATATATCAGCAGAAATTTTAAGATCATAGAGAATATTAACAT  396

seq1  TAAGAATGCTCTCTGTTAGCCATTTATTGAAGCCAAGCCATAGAACAAAG  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAATGCTCTCTGTTAGCCATTTATTGAAGCCAAGCCATAGAACAAAG  446

seq1  GTGTTTTGGAAAAATTTTGTAGTGACTGAAGATGGAGTTTAGATTCGGTG  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTTGGAAAAATTTTGTAGTGACTGAAGATGGAGTTTAGATTCGGTG  496

seq1  TTGCCCATCTCCCAGCCTTGTGGGAGGCCTATGACACAGTGTCCCATGTG  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCCATCTCCCAGCCTTGTGGGAGGCCTATGACACAGTGTCCCATGTG  546

seq1  GTAGCCTGGGGTCAAACAGTGGTGGTTCCCCAGAACACAGAGCCCCTCCA  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCCTGGGGTCAAACAGTGGTGGTTCCCCAGAACACAGAGCCCCTCCA  596

seq1  TGGCCCCTGCATCAGGCTCCTACCCTGTCGAGTGTCTACCCTGACTTCCT  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCCCTGCATCAGGCTCCTACCCTGTCGAGTGTCTACCCTGACTTCCT  646

seq1  TCCCTGATGGACAGTGCTGTGGAAGTGTGAGCTGAGTAATCCTTTCCTCG  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGATGGACAGTGCTGTGGAAGTGTGAGCTGAGTAATCCTTTCCTCG  696

seq1  CCAAGGGTCATGTTGTAGTAAGACAGCTTGTAAAGATAAGAAACAAATGG  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGGGTCATGTTGTAGTAAGACAGCTTGTAAAGATAAGAAACAAATGG  746

seq1  GAAAAGTGACTAATAAAGTAATCCCCAAGCCTAAAAAGAACGTATAAATC  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGTGACTAATAAAGTAATCCCCAAGCCTAAAAAGAACGTATAAATC  796

seq1  ACCAGGCATGGTGGCAGATGCCTCTGATGCAGACAATGGGATACAGAAGC  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGCATGGTGGCAGATGCCTCTGATGCAGACAATGGGATACAGAAGC  846

seq1  AGGGATGGTTGTAATACTAGAGGAAAACCTGGTCTACAGAGCGGTTCCGG  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATGGTTGTAATACTAGAGGAAAACCTGGTCTACAGAGCGGTTCCGG  896

seq1  GTCAGGTAGGGCTACATAGTGAGATCCTGTCTCAAAACAAAACAAACCCT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGGTAGGGCTACATAGTGAGATCCTGTCTCAAAACAAAACAAACCCT  946

seq1  AAGTCCCGACTACATCAAATCTCATTCCTCTTCTTAAGACCCCGTTACTA  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCCCGACTACATCAAATCTCATTCCTCTTCTTAAGACCCCGTTACTA  996

seq1  ATGATCTCTAAACCAAATGTATCCTTGTGTGATACAGCTCAGAATAAAGA  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATCTCTAAACCAAATGTATCCTTGTGTGATACAGCTCAGAATAAAGA  1046

seq1  TTAACGAGGTAGCATAGGGCTCTAACCCCAGCTCTTAGGAGGCAGGAGGA  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACGAGGTAGCATAGGGCTCTAACCCCAGCTCTTAGGAGGCAGGAGGA  1096

seq1  CTGTGAATTC  1101
      ||||||||||
seq2  CTGTGAATTC  1106

seq1: chr18_77008524_77008954
seq2: B6Ng01-181P01.g_79_513

seq1  GAATTCACCTTACTCCAGCACCTAAGGCCTTCCCATGAGTCCTCCACTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCTTACTCCAGCACCTAAGGCCTTCCCATGAGTCCTCCACTAC  50

seq1  CTTACCCTTCTGCAACATGAGCCAGTCAGGAAACAGGCTCTGAGAGAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACCCTTCTGCAACATGAGCCAGTCAGGAAACAGGCTCTGAGAGAGAG  100

seq1  AAATACTCATGGCTTGCTCTGGCGGTCTCTCAGGAGTACCAAGCTGTAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACTCATGGCTTGCTCTGGCGGTCTCTCAGGAGTACCAAGCTGTAGG  150

seq1  ACTGTGGCAAGATTACTTCCCTCATCTAGAAAACTAAAACTGCAGCTGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGGCAAGATTACTTCCCTCATCTAGAAAACTAAAACTGCAGCTGTG  200

seq1  GTTAGAAAATTATTTGGAGGGCCAGTGATATGGCTCAGTCGGTAAGGGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGAAAATTATTTGGAGGGCCAGTGATATGGCTCAGTCGGTAAGGGTG  250

seq1  CCTGCTCCCAAGCCTGCTACCTGAGTTCTACTTTGAGAATCCACACAGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCTCCCAAGCCTGCTACCTGAGTTCTACTTTGAGAATCCACACAGGA  300

seq1  CAAAGTCCTCTGACCTCCACATGCCTGTGTCCCACACATAAATATAGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTCCTCTGACCTCCACATGCCTGTGTCCCACACATAAATATAGAGA  350

seq1  GACTCAAAAAGGAAATAAATACAA----AGATAGATAGATAGATAGATAG  396
      ||||||||||||||||||||||||    ||||||||||||||||||||||
seq2  GACTCAAAAAGGAAATAAATACAAAGATAGATAGATAGATAGATAGATAG  400

seq1  ATAGATAGATAGATAGATAGATAGATAGGAATTTT  431
      |||||||||||||||||||||||||||||||||||
seq2  ATAGATAGATAGATAGATAGATAGATAGGAATTTT  435

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