BAC Information

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BAC

Clone NameB6Ng01-182O12
Chromosome18 (Build37)
Map Location 86,105,143 - 86,292,378
singlet/doubletdoublet
Overlap geneLOC545270
Upstream geneFbxo15, 1700034H14Rik, LOC100039765, LOC665382, LOC545269
Downstream geneLOC665402, Neto1, Cbln2, LOC100039872, LOC100039881, LOC665437, LOC435580, LOC546719
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-182O12.bB6Ng01-182O12.g
ACCGA008670GA008671
length1,0471,059
definitionB6Ng01-182O12.b B6Ng01-182O12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(86,291,626 - 86,292,378)(86,105,143 - 86,106,202)
sequence
gaattctccaaatttaatgagctaaggggtttattgtggctccatttttt
ttttttttgcatatgctggcacagaggtttaaaaacagagaactattcag
atgtaatcctttaaaagtattttattttatcatcctttaaagcataagta
tttccatttaaagaatcattttgattttgtaagtatagtaagtatgatga
caatccagaatgttctactttctcttgtagaattctgatgataaccttaa
aatatattatatcatgaatccatgtaaaaccagtaaactctttaataata
ttgttgaaaggtattataagtacaaaattatgtgaatgaacactttgaac
taggaataagaaacaaaaatacattttcatatttattctttagatgtctt
attcattttccaatatgtattgaccatatgcatccactactacatatcta
catgctcactccgactccccctcaacacaatccctccaagatttgtttat
cagttgtattgttaataacccaagtatgagtagtgctgtccatatatatg
catgaggccatccactgagacatgagacaacctccagtgcaagaggctgc
attgtcaaaggagaacaaatccccttcccacagacatctgttcccaatag
ctcctcatataggaattgcttctaagtggttataattttcactagatgat
tttgttcaggtcttgtatgggttgacacagtttctgtggtgtatgcagta
gccatgttgtgtctgggaaccagcatctcactccttccttcccatacttt
ttctcttacattcattctgttccccatccatgaagttctctgaaccttag
tgggaggggtagtttacaaagatgttccacccacatgtgaatatttagag
tttattttcactacatgatgtatgaattctccgcacacccacttaatcca
gcttcgctgacacacatcaattatttattgacacagcttgacagtctagc
aatttacaaacacatcagcaggtttcccccaaccagtctctatcgtc
gaattctctgtttagctctgtaccccatttttaatggggttatttggttt
tctagagtccagctttttgagttctttgtatatattgtatattagtcccc
tattggatttaggataggtaaagatcctttcccaatctgttggtggcctt
tttgtcttactgacattgaaacccactgtttttgattcatgtatatgttt
attacctgcattggcaacttctgttacatataatatagacctatgcatca
ttcatatgctatcttgttaagacctaatctgtctctaaattgagcacctg
tcttcagaccaccactcaggttttgaatgaaacaacacttgccacttact
tgatagatggcattttctctttgatgttttacaattactgttcccattat
ttctgaaatatcttactctataattacctcagtatagttaatgtctttgg
gactcaagagagcacaaacaaacggtcatttgttccaatgtcaaatggca
accagtagagattagttcaagatttcctctttggtgacagagaaacaaat
gaatcatgtcattgacttagataggattctggaacacacttatgttgaca
gtggtgtttttggaacacccctatatttggacactgatatggacacaagg
aggaatatagtcaagctgagagacataaatgccatatgtgtgaaaactgg
aggtgtaaacttgactggaaagttaccaagagatgaccaaatttaagtta
gtattcaattgcataagccccatttctcctcaaatttagacactactttg
tttacatacctttcattttgatctcattgtacagagatttcaataattta
ttaaacacagaattgatccccagggtattagagacacaactattcctaag
cttaatggaaatgccacttacaatgttttctctagaggcacattttagta
cttgttttttgtgtgtatcttatccaggtagcacagttttacattgtttc
aactttactagaaaattgcttgcaatttgatgagtctattatcaatgatg
cttaagact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_86291626_86292378
seq2: B6Ng01-182O12.b_47_799 (reverse)

seq1  GGCTACTGCATACACCACAGAAACTGTGTCAACCCATACAAGACCTGAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTACTGCATACACCACAGAAACTGTGTCAACCCATACAAGACCTGAAC  50

seq1  AAAATCATCTAGTGAAAATTATAACCACTTAGAAGCAATTCCTATATGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCATCTAGTGAAAATTATAACCACTTAGAAGCAATTCCTATATGAG  100

seq1  GAGCTATTGGGAACAGATGTCTGTGGGAAGGGGATTTGTTCTCCTTTGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTATTGGGAACAGATGTCTGTGGGAAGGGGATTTGTTCTCCTTTGAC  150

seq1  AATGCAGCCTCTTGCACTGGAGGTTGTCTCATGTCTCAGTGGATGGCCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCAGCCTCTTGCACTGGAGGTTGTCTCATGTCTCAGTGGATGGCCTC  200

seq1  ATGCATATATATGGACAGCACTACTCATACTTGGGTTATTAACAATACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATATATATGGACAGCACTACTCATACTTGGGTTATTAACAATACAA  250

seq1  CTGATAAACAAATCTTGGAGGGATTGTGTTGAGGGGGAGTCGGAGTGAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATAAACAAATCTTGGAGGGATTGTGTTGAGGGGGAGTCGGAGTGAGC  300

seq1  ATGTAGATATGTAGTAGTGGATGCATATGGTCAATACATATTGGAAAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGATATGTAGTAGTGGATGCATATGGTCAATACATATTGGAAAATG  350

seq1  AATAAGACATCTAAAGAATAAATATGAAAATGTATTTTTGTTTCTTATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGACATCTAAAGAATAAATATGAAAATGTATTTTTGTTTCTTATTC  400

seq1  CTAGTTCAAAGTGTTCATTCACATAATTTTGTACTTATAATACCTTTCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTCAAAGTGTTCATTCACATAATTTTGTACTTATAATACCTTTCAA  450

seq1  CAATATTATTAAAGAGTTTACTGGTTTTACATGGATTCATGATATAATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATTATTAAAGAGTTTACTGGTTTTACATGGATTCATGATATAATAT  500

seq1  ATTTTAAGGTTATCATCAGAATTCTACAAGAGAAAGTAGAACATTCTGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAAGGTTATCATCAGAATTCTACAAGAGAAAGTAGAACATTCTGGA  550

seq1  TTGTCATCATACTTACTATACTTACAAAATCAAAATGATTCTTTAAATGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCATCATACTTACTATACTTACAAAATCAAAATGATTCTTTAAATGG  600

seq1  AAATACTTATGCTTTAAAGGATGATAAAATAAAATACTTTTAAAGGATTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACTTATGCTTTAAAGGATGATAAAATAAAATACTTTTAAAGGATTA  650

seq1  CATCTGAATAGTTCTCTGTTTTTAAACCTCTGTGCCAGCATATGCAAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGAATAGTTCTCTGTTTTTAAACCTCTGTGCCAGCATATGCAAAAA  700

seq1  AAAAAAAAATGGAGCCACAATAAACCCCTTAGCTCATTAAATTTGGAGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAATGGAGCCACAATAAACCCCTTAGCTCATTAAATTTGGAGAA  750

seq1  TTC  753
      |||
seq2  TTC  753

seq1: chr18_86105143_86106202
seq2: B6Ng01-182O12.g_72_1130

seq1  GAATTCTCTGTTTAGCTCTGTACCCCATTTTTAATGGGGTTATTTGGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGTTTAGCTCTGTACCCCATTTTTAATGGGGTTATTTGGTTT  50

seq1  TCTAGAGTCCAGCTTTTTGAGTTCTTTGTATATATTGTATATTAGTCCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGAGTCCAGCTTTTTGAGTTCTTTGTATATATTGTATATTAGTCCCC  100

seq1  TATTGGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGCCTT  150

seq1  TTTGTCTTACTGACATTGAAACCCACTGTTTTTGATTCATGTATATGTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCTTACTGACATTGAAACCCACTGTTTTTGATTCATGTATATGTTT  200

seq1  ATTACCTGCATTGGCAACTTCTGTTACATATAATATAGACCTATGCATCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACCTGCATTGGCAACTTCTGTTACATATAATATAGACCTATGCATCA  250

seq1  TTCATATGCTATCTTGTTAAGACCTAATCTGTCTCTAAATTGAGCACCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATATGCTATCTTGTTAAGACCTAATCTGTCTCTAAATTGAGCACCTG  300

seq1  TCTTCAGACCACCACTCAGGTTTTGAATGAAACAACACTTGCCACTTACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAGACCACCACTCAGGTTTTGAATGAAACAACACTTGCCACTTACT  350

seq1  TGATAGATGGCATTTTCTCTTTGATGTTTTACAATTACTGTTCCCATTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGATGGCATTTTCTCTTTGATGTTTTACAATTACTGTTCCCATTAT  400

seq1  TTCTGAAATATCTTACTCTATAATTACCTCAGTATAGTTAATGTCTTTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAAATATCTTACTCTATAATTACCTCAGTATAGTTAATGTCTTTGG  450

seq1  GACTCAAGAGAGCACAAACAAACGGTCATTTGTTCCAATGTCAAATGGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCAAGAGAGCACAAACAAACGGTCATTTGTTCCAATGTCAAATGGCA  500

seq1  ACCAGTAGAGATTAGTTCAAGATTTCCTCTTTGGTGACAGAGAAACAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGTAGAGATTAGTTCAAGATTTCCTCTTTGGTGACAGAGAAACAAAT  550

seq1  GAATCATGTCATTGACTTAGATAGGATTCTGGAACACACTTATGTTGACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCATGTCATTGACTTAGATAGGATTCTGGAACACACTTATGTTGACA  600

seq1  GTGGTGTTTTTGGAACACCCCTATATTTGGACACTGATATGGACACAAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGTTTTTGGAACACCCCTATATTTGGACACTGATATGGACACAAGG  650

seq1  AGGAATATAGTCAAGCTGAGAGACATAAATGCCATATGTGTGAAAACTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATATAGTCAAGCTGAGAGACATAAATGCCATATGTGTGAAAACTGG  700

seq1  AGGTGTAAACTTGACTGGAAAGTTACCAAGAGATGACCAAATTTAAGTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTAAACTTGACTGGAAAGTTACCAAGAGATGACCAAATTTAAGTTA  750

seq1  GTATTCAATTGCATAAGGCCCCATTTCTCCTCAAATTTAGACACTACTTT  800
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GTATTCAATTGCATAA-GCCCCATTTCTCCTCAAATTTAGACACTACTTT  799

seq1  GTTTACATACCTTTCATTTTGATCTCATTGTACAGAGATTTCAATAATTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACATACCTTTCATTTTGATCTCATTGTACAGAGATTTCAATAATTT  849

seq1  ATTAAACACAGAATTGATCCCCAGGGTATTAGAGACACAACTATTCCTAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAACACAGAATTGATCCCCAGGGTATTAGAGACACAACTATTCCTAA  899

seq1  GCTTAATGGAAATG-CACTTACAATGTTTTCTCTAGAGCAACATTTTAGT  949
      |||||||||||||| |||||||||||||||||||||||  ||||||||||
seq2  GCTTAATGGAAATGCCACTTACAATGTTTTCTCTAGAGGCACATTTTAGT  949

seq1  ACTTGTTTT---TGTGTATCTTATCCAGGTAGCACAGTTTTACAATGTTT  996
      |||||||||   |||||||||||||||||||||||||||||||| |||||
seq2  ACTTGTTTTTTGTGTGTATCTTATCCAGGTAGCACAGTTTTACATTGTTT  999

seq1  CAACTTACCTTAGAAAATTGCTTGCAATTTGATGAGTCTAATTATCAAAT  1046
      ||||||  | ||||||||||||||||||||||||||||| |||||| |||
seq2  CAACTTTAC-TAGAAAATTGCTTGCAATTTGATGAGTCT-ATTATC-AAT  1046

seq1  GATGGTTTAAGACT  1060
      ||| | ||||||||
seq2  GAT-GCTTAAGACT  1059