BAC Information

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BAC

Clone NameB6Ng01-190I01
Chromosome18 (Build37)
Map Location 85,505,633 - 85,656,955
singlet/doubletdoublet
Overlap genenone
Upstream geneZfp407, Cndp1, EG640234, Cndp2, LOC100039711, LOC100039725, B230399E16Rik, Cyb5, Fbxo15, 1700034H14Rik, LOC100039765
Downstream geneLOC665382, LOC545269, LOC545270, LOC665402, Neto1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-190I01.bB6Ng01-190I01.g
ACCGA014242GA014243
length900891
definitionB6Ng01-190I01.b B6Ng01-190I01.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(85,656,057 - 85,656,955)(85,505,633 - 85,506,517)
sequence
gaattctctctgccagcttctccgtggagtaaatagaaactgaggtattt
cagttttagcagaaatctccaatttccacttctgtaggcatttttcattc
actgtaattaagtattaaatctaaagcaagttattttgtactagttaata
tggtaagataatacgaaaaggaagttagaaaactgaatagagaaatgttt
gcatgcacttaagcttctgaggaaagatgtaagtgtacgctcagaacact
gagatagaaaagctttcagctgtttcctggagttacatgccatatattag
gaatgccatcaccctctgagctccagacagaaatcttcacaacagatgtt
cagtgctgtttttattttttttctgtcttgacaaaatatacaacgaaaga
gaggaagggttaatgttggctcacagtttgaaggtacaattggtctccct
gtatccacagagaggatagcaatccatgctctagtaacattgtatccacg
gtcccaggggagaccaatgtgtgctttcagcttgaatttagacatgggat
gatgttgtccacatttagagtggctcttgctgtgtcaattggctctgaag
aaagcattaaaaataaaaaataagccaagacacacacctagcctttataa
aattgtagctactatgaaatgaggatagacagcttggtctaataatgtcc
tggaaattattcttgtttcattccattttttaactatgagagagtgaaac
atatttcaacatccactggaagactaagcagagagagaaaataaatagat
aaaagaaagtcactgtagtaaatacggcatgaagagagacgtcctcagaa
gcactagtttatggggaacataagtagatggagagatggggagggaggga


gaattcaatcccacgaataaatgggatctatgtttttcttgaaaatgtgc
ttaattaaagtcagaggagtactgagaactagttgtttgataaaggaagg
caggtgggtgggtgtgcttacagcacggccgaggcataaagtagagtccc
tgtcatgtaccagcagtatacggagagcttgagacttcagaccaaccgta
tgaactccctgaacacaggaattcatactactcacactgtagctcaatga
atttactttaaagctaagcaatttgccttataaatggtcagctcacaacc
attccacttacatggtctcccctacagattcttgtctgatagacccaatc
caatgctctccccaaactcaatgtttccactcatactacttccctcctgc
tttatgatatttgttcttcacagtcctttggataatgttatcaggagatt
ttcactactctatttcctgtctctcatttcattgattctctttccctgtc
acatcgctgcataacaatatcagaaggatgtgatttctttccaagtcttt
acagctaacacaatagtattttttcttggaggatgcctcagtgcacattt
ttaagagtattcaggctttccccaaaagcagcttctcaaatactgcttat
gtgttatttgtagattcagcagacatataatccagagcttggagaaggtg
tgacaaacagctcaggtgatgcctatggggagggggtatgtgtgtcacag
cctagaatccaggctaggattaatgacttagtgccattttccttggttgt
tgcatcattattttataaagtgaaggtaagctttgggaaaacaataggaa
agaagtaaggaaggagtaatgtcaaaaaaagggcagcacaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_85656057_85656955
seq2: B6Ng01-190I01.b_46_945 (reverse)

seq1  TCCCTCCCT-CCCATCTCTCCATCTACTTATGTTCCCCATAAACTAGTGC  49
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCCCTCCCCATCTCTCCATCTACTTATGTTCCCCATAAACTAGTGC  50

seq1  TTCTGAGGACGTCTCTCTTCATGCCGTATTTACTACAGTGACTTTCTTTT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAGGACGTCTCTCTTCATGCCGTATTTACTACAGTGACTTTCTTTT  100

seq1  ATCTATTTATTTTCTCTCTCTGCTTAGTCTTCCAGTGGATGTTGAAATAT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATTTATTTTCTCTCTCTGCTTAGTCTTCCAGTGGATGTTGAAATAT  150

seq1  GTTTCACTCTCTCATAGTTAAAAAATGGAATGAAACAAGAATAATTTCCA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCACTCTCTCATAGTTAAAAAATGGAATGAAACAAGAATAATTTCCA  200

seq1  GGACATTATTAGACCAAGCTGTCTATCCTCATTTCATAGTAGCTACAATT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATTATTAGACCAAGCTGTCTATCCTCATTTCATAGTAGCTACAATT  250

seq1  TTATAAAGGCTAGGTGTGTGTCTTGGCTTATTTTTTATTTTTAATGCTTT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAAGGCTAGGTGTGTGTCTTGGCTTATTTTTTATTTTTAATGCTTT  300

seq1  CTTCAGAGCCAATTGACACAGCAAGAGCCACTCTAAATGTGGACAACATC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGAGCCAATTGACACAGCAAGAGCCACTCTAAATGTGGACAACATC  350

seq1  ATCCCATGTCTAAATTCAAGCTGAAAGCACACATTGGTCTCCCCTGGGAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCATGTCTAAATTCAAGCTGAAAGCACACATTGGTCTCCCCTGGGAC  400

seq1  CGTGGATACAATGTTACTAGAGCATGGATTGCTATCCTCTCTGTGGATAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGGATACAATGTTACTAGAGCATGGATTGCTATCCTCTCTGTGGATAC  450

seq1  AGGGAGACCAATTGTACCTTCAAACTGTGAGCCAACATTAACCCTTCCTC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGACCAATTGTACCTTCAAACTGTGAGCCAACATTAACCCTTCCTC  500

seq1  TCTTTCGTTGTATATTTTGTCAAGACAGAAAAAAAATAAAAACAGCACTG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCGTTGTATATTTTGTCAAGACAGAAAAAAAATAAAAACAGCACTG  550

seq1  AACATCTGTTGTGAAGATTTCTGTCTGGAGCTCAGAGGGTGATGGCATTC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCTGTTGTGAAGATTTCTGTCTGGAGCTCAGAGGGTGATGGCATTC  600

seq1  CTAATATATGGCATGTAACTCCAGGAAACAGCTGAAAGCTTTTCTATCTC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATATATGGCATGTAACTCCAGGAAACAGCTGAAAGCTTTTCTATCTC  650

seq1  AGTGTTCTGAGCGTACACTTACATCTTTCCTCAGAAGCTTAAGTGCATGC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTCTGAGCGTACACTTACATCTTTCCTCAGAAGCTTAAGTGCATGC  700

seq1  AAACATTTCTCTATTCAGTTTTCTAACTTCCTTTTCGTATTATCTTACCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATTTCTCTATTCAGTTTTCTAACTTCCTTTTCGTATTATCTTACCA  750

seq1  TATTAACTAGTACAAAATAACTTGCTTTAGATTTAATACTTAATTACAGT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAACTAGTACAAAATAACTTGCTTTAGATTTAATACTTAATTACAGT  800

seq1  GAATGAAAAATGCCTACAGAAGTGGAAATTGGAGATTTCTGCTAAAACTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAAAAATGCCTACAGAAGTGGAAATTGGAGATTTCTGCTAAAACTG  850

seq1  AAATACCTCAGTTTCTATTTACTCCACGGAGAAGCTGGCAGAGAGAATTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACCTCAGTTTCTATTTACTCCACGGAGAAGCTGGCAGAGAGAATTC  900


seq1: chr18_85505633_85506517
seq2: B6Ng01-190I01.g_63_952

seq1  GAATTCAATCCCACGAATAAATGGGATCTATGTTTTTCTTGAAAATGTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATCCCACGAATAAATGGGATCTATGTTTTTCTTGAAAATGTGC  50

seq1  TTAATTAAAGTCAGAGGAGTACTGAGAACTAGTTGTTTGATAAAGGAAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTAAAGTCAGAGGAGTACTGAGAACTAGTTGTTTGATAAAGGAAGG  100

seq1  CAGGTGGGTGGGTGTGCTTACAGCACGGCCGAGGCATAAAGTAGAGTCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGGGTGGGTGTGCTTACAGCACGGCCGAGGCATAAAGTAGAGTCCC  150

seq1  TGTCATGTACCAGCAGTATACGGAGAGCTTGAGACTTCAGACCAACCGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATGTACCAGCAGTATACGGAGAGCTTGAGACTTCAGACCAACCGTA  200

seq1  TGAACTCCCTGAACACAGGAATTCATACTACTCACACTGTAGCTCAATGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTCCCTGAACACAGGAATTCATACTACTCACACTGTAGCTCAATGA  250

seq1  ATTTACTTTAAAGCTAAGCAATTTGCCTTATAAATGGTCAGCTCACAACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACTTTAAAGCTAAGCAATTTGCCTTATAAATGGTCAGCTCACAACC  300

seq1  ATTCCACTTACATGGTCTCCCCTACAGATTCTTGTCTGATAGACCCAATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCACTTACATGGTCTCCCCTACAGATTCTTGTCTGATAGACCCAATC  350

seq1  CAATGCTCTCCCCAAACTCAATGTTTCCACTCATACTACTTCCCTCCTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGCTCTCCCCAAACTCAATGTTTCCACTCATACTACTTCCCTCCTGC  400

seq1  TTTATGATATTTGTTCTTCACAGTCCTTTGGATAATGTTATCAGGAGATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGATATTTGTTCTTCACAGTCCTTTGGATAATGTTATCAGGAGATT  450

seq1  TTCACTACTCTATTTCCTGTCTCTCATTTCATTGATTCTCTTTCCCTGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTACTCTATTTCCTGTCTCTCATTTCATTGATTCTCTTTCCCTGTC  500

seq1  ACATCGCTGCATAACAATATCAGAAGGATGTGATTTCTTTCCAAGTCTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCGCTGCATAACAATATCAGAAGGATGTGATTTCTTTCCAAGTCTTT  550

seq1  ACAGCTAACACAATAGTATTTTTTCTTGGAGGATGCCTCAGTGCACATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTAACACAATAGTATTTTTTCTTGGAGGATGCCTCAGTGCACATTT  600

seq1  TTAAGAGTATTCAGGCTTTCCCCAAAAGCAGCTTCTCAAATACTGCTTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGAGTATTCAGGCTTTCCCCAAAAGCAGCTTCTCAAATACTGCTTAT  650

seq1  GTGTTATTTGTAGATTCAGCAGACATATAATCCAGAGCTTGGAGAAGGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTATTTGTAGATTCAGCAGACATATAATCCAGAGCTTGGAGAAGGTG  700

seq1  TGACAAACAGCTCAGGTGATGCCTATGGGGAGGGGGTATGTGTGTCACAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAAACAGCTCAGGTGATGCCTATGGGGAGGGGGTATGTGTGTCACAG  750

seq1  CCTAGAATCCAGGCTAGGATTAATGAC-TAGTGCCATTTT-CTTTGTTGT  798
      ||||||||||||||||||||||||||| |||||||||||| ||| |||||
seq2  CCTAGAATCCAGGCTAGGATTAATGACTTAGTGCCATTTTCCTTGGTTGT  800

seq1  TGCATCATTATTTTATAAAGTGAAGGTAAGC-TTGGGAAAACATAAGGAT  847
      ||||||||||||||||||||||||||||||| |||||||||||  |||| 
seq2  TGCATCATTATTTTATAAAGTGAAGGTAAGCTTTGGGAAAACAATAGGAA  850

seq1  AG-AGTAAGGAAGGAGTAATGTC-AGAGAAGGGCAGCACA  885
      || |||||||||||||||||||| | | ||||||||||||
seq2  AGAAGTAAGGAAGGAGTAATGTCAAAAAAAGGGCAGCACA  890


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